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The map label for this gene is traH [H]

Identifier: 153951351

GI number: 153951351

Start: 835645

End: 837111

Strand: Direct

Name: traH [H]

Synonym: JJD26997_0938

Alternate gene names: 153951351

Gene position: 835645-837111 (Clockwise)

Preceding gene: 153951366

Following gene: 153952515

Centisome position: 45.29

GC content: 32.79

Gene sequence:

>1467_bases
ATGGGCGATTTAAAAAAGAGGGTGGTAATTTCTGCTATTGCATGTGCATTTTTGTTACCAAGTGCTTTAAATGCAAATTT
ATCAAGCTTTATTCAAAACAATTTAGGCAGTTCTATCACTTCTGAAAATTCAGGTTATTATAAATCTCAGGTTTCAGGTT
TTATTAGTGGGGGTAGTTCAAGAATTAGATGGGGTGGTGGTGAAACTATACGCCCTTTTTCAGTAACTGCACCAAGTTTT
AATGTAGGATGTAGTGGTATTGATATGATCTTTGGTGGATTTTCTTATCTTAATTTTGAGTATTTGGTTAAAAAGCTTAA
AAAGATTGCTTCAGCTGCACCTTCCTATGCTTTTCAAATGGCACTTTCTACGCTTTGTAAAGATTGTCAAACCATTATGG
ATGAGCTTGAAAAAATAGCAAATGCTATTAATAGCATGAACTTTGATACTTGCCAAATGACAACAAATTGGACTAATAAA
TTTGGAAAAATGCTCAGCTCTAATGCGGAAAGTGGACAAAACGATAGTTGGTTATCTTCTTTTGCTAAGGGTATGGAAGG
AACAGCTCAAACGGTACAAAATTTTGTTAAAGAAGCAAATGCTTTTGTCAATGGAACAACTCCTGATGAAAGCGGTGAAA
CAAATGCAGCTAAAATTTTAAAACAAGGATCCATTATTCAAAAAGTAATTGAAAAAGGCAAAGCAAGTTTCTTTGCTGAA
GCTTTTGGAGAGGATCAATATGAAGATATTTTAAGGGGTGTTTTTGGTGATTTGGTAGCTTATACTGAAAAAAGCACTTC
TGTCACTAGTAAAGAAATGAGTGATCCTGAAAAAGTTATGTTAATAGGTCCTACTTTAAATACAGACAAATTCCTTGAAG
CGCTATGGAACAAAAATGGTGAAAATAAATCTATAACGCTTGAATTTACAGCTTATACGATTAGCAAAGATGAAAATGGT
TTGTATCAAGAACCTGTAGGAAAAAAAACAAAAGTAACTATAGATAAAGATATTCGTTCTTTGTTGATTGAAAAATTTAA
AGCTATTGTTGCAAAAATTAAGGCAAAAAGTGCTTTAGATGATGCGGATAAAAACTTAATTAATGCCGCACCTTTACCTG
TTGCTGATATTTTAAATATTGAAGCTTCAACAGAACTTAATGGGGATGCTGTTCATGAATTTGTGGCGCTTTTAATGGTA
GATGCTTTTGTTAATGAGCTTTTTAATGAGTTTGTAACAAATATCAATACCGTACAAGGCTTAGATCCTAAATTCTCAAG
CGATCATAAAGATGATCTTGCCAAATTCAATGCAGCTGTTGCTAAAGTACAAGAAACTACGAGAACTCTACTTAGCGAAA
ATGCACAAGCTATTATTAGAGATAATCAACAAGTTGATTCAATTAGAAAAATCATTTCGAATTTCTATGGAGTTAGCGAT
ATATTTAATTATGGAACAGGTAGATAG

Upstream 100 bases:

>100_bases
TACCAAAAGATAAGTTTTTTGTAATGGGAACACATCCTAGAAGCTTTGATAGTAGGTATTGGGGTTTTGTAGATAGAAAA
GATATTAAAGGAGTTTCTAT

Downstream 100 bases:

>100_bases
GAGAAAGCATGAGAAAATATCTTTTTTTAGCTCTTGCAGCTTGTAGCTTTTTACACGCTGCAAATGATGCTGCTGCTGAA
GGCAATAGTTTTGGTTCGCA

Product: putative TraG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MGDLKKRVVISAIACAFLLPSALNANLSSFIQNNLGSSITSENSGYYKSQVSGFISGGSSRIRWGGGETIRPFSVTAPSF
NVGCSGIDMIFGGFSYLNFEYLVKKLKKIASAAPSYAFQMALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNK
FGKMLSSNAESGQNDSWLSSFAKGMEGTAQTVQNFVKEANAFVNGTTPDESGETNAAKILKQGSIIQKVIEKGKASFFAE
AFGEDQYEDILRGVFGDLVAYTEKSTSVTSKEMSDPEKVMLIGPTLNTDKFLEALWNKNGENKSITLEFTAYTISKDENG
LYQEPVGKKTKVTIDKDIRSLLIEKFKAIVAKIKAKSALDDADKNLINAAPLPVADILNIEASTELNGDAVHEFVALLMV
DAFVNELFNEFVTNINTVQGLDPKFSSDHKDDLAKFNAAVAKVQETTRTLLSENAQAIIRDNQQVDSIRKIISNFYGVSD
IFNYGTGR

Sequences:

>Translated_488_residues
MGDLKKRVVISAIACAFLLPSALNANLSSFIQNNLGSSITSENSGYYKSQVSGFISGGSSRIRWGGGETIRPFSVTAPSF
NVGCSGIDMIFGGFSYLNFEYLVKKLKKIASAAPSYAFQMALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNK
FGKMLSSNAESGQNDSWLSSFAKGMEGTAQTVQNFVKEANAFVNGTTPDESGETNAAKILKQGSIIQKVIEKGKASFFAE
AFGEDQYEDILRGVFGDLVAYTEKSTSVTSKEMSDPEKVMLIGPTLNTDKFLEALWNKNGENKSITLEFTAYTISKDENG
LYQEPVGKKTKVTIDKDIRSLLIEKFKAIVAKIKAKSALDDADKNLINAAPLPVADILNIEASTELNGDAVHEFVALLMV
DAFVNELFNEFVTNINTVQGLDPKFSSDHKDDLAKFNAAVAKVQETTRTLLSENAQAIIRDNQQVDSIRKIISNFYGVSD
IFNYGTGR
>Mature_487_residues
GDLKKRVVISAIACAFLLPSALNANLSSFIQNNLGSSITSENSGYYKSQVSGFISGGSSRIRWGGGETIRPFSVTAPSFN
VGCSGIDMIFGGFSYLNFEYLVKKLKKIASAAPSYAFQMALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNKF
GKMLSSNAESGQNDSWLSSFAKGMEGTAQTVQNFVKEANAFVNGTTPDESGETNAAKILKQGSIIQKVIEKGKASFFAEA
FGEDQYEDILRGVFGDLVAYTEKSTSVTSKEMSDPEKVMLIGPTLNTDKFLEALWNKNGENKSITLEFTAYTISKDENGL
YQEPVGKKTKVTIDKDIRSLLIEKFKAIVAKIKAKSALDDADKNLINAAPLPVADILNIEASTELNGDAVHEFVALLMVD
AFVNELFNEFVTNINTVQGLDPKFSSDHKDDLAKFNAAVAKVQETTRTLLSENAQAIIRDNQQVDSIRKIISNFYGVSDI
FNYGTGR

Specific function: Involved in pilus assembly [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010927 [H]

Pfam domain/function: PF06122 TraH [H]

EC number: NA

Molecular weight: Translated: 53298; Mature: 53167

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLKKRVVISAIACAFLLPSALNANLSSFIQNNLGSSITSENSGYYKSQVSGFISGGSS
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
RIRWGGGETIRPFSVTAPSFNVGCSGIDMIFGGFSYLNFEYLVKKLKKIASAAPSYAFQM
EEEECCCCEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNKFGKMLSSNAESGQNDSWLSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHH
FAKGMEGTAQTVQNFVKEANAFVNGTTPDESGETNAAKILKQGSIIQKVIEKGKASFFAE
HHHCCCHHHHHHHHHHHHHHCEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
AFGEDQYEDILRGVFGDLVAYTEKSTSVTSKEMSDPEKVMLIGPTLNTDKFLEALWNKNG
HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCC
ENKSITLEFTAYTISKDENGLYQEPVGKKTKVTIDKDIRSLLIEKFKAIVAKIKAKSALD
CCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADKNLINAAPLPVADILNIEASTELNGDAVHEFVALLMVDAFVNELFNEFVTNINTVQG
HHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC
LDPKFSSDHKDDLAKFNAAVAKVQETTRTLLSENAQAIIRDNQQVDSIRKIISNFYGVSD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHH
IFNYGTGR
HHHCCCCC
>Mature Secondary Structure 
GDLKKRVVISAIACAFLLPSALNANLSSFIQNNLGSSITSENSGYYKSQVSGFISGGSS
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCC
RIRWGGGETIRPFSVTAPSFNVGCSGIDMIFGGFSYLNFEYLVKKLKKIASAAPSYAFQM
EEEECCCCEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
ALSTLCKDCQTIMDELEKIANAINSMNFDTCQMTTNWTNKFGKMLSSNAESGQNDSWLSS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHCCCCCCCCHHHHHH
FAKGMEGTAQTVQNFVKEANAFVNGTTPDESGETNAAKILKQGSIIQKVIEKGKASFFAE
HHHCCCHHHHHHHHHHHHHHCEECCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHH
AFGEDQYEDILRGVFGDLVAYTEKSTSVTSKEMSDPEKVMLIGPTLNTDKFLEALWNKNG
HHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCC
ENKSITLEFTAYTISKDENGLYQEPVGKKTKVTIDKDIRSLLIEKFKAIVAKIKAKSALD
CCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
DADKNLINAAPLPVADILNIEASTELNGDAVHEFVALLMVDAFVNELFNEFVTNINTVQG
HHHHHHHCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCC
LDPKFSSDHKDDLAKFNAAVAKVQETTRTLLSENAQAIIRDNQQVDSIRKIISNFYGVSD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHH
IFNYGTGR
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1348105; 7915817; 2656408 [H]