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The map label for this gene is yedY [H]

Identifier: 153951286

GI number: 153951286

Start: 1395150

End: 1396043

Strand: Direct

Name: yedY [H]

Synonym: JJD26997_1578

Alternate gene names: 153951286

Gene position: 1395150-1396043 (Clockwise)

Preceding gene: 153951680

Following gene: 153951056

Centisome position: 75.61

GC content: 33.67

Gene sequence:

>894_bases
ATGATTATAACCCCTGAGAATTTATATAAAAAAAGAAGAGATTTTTTAAAACTTGGAACAGGTGCTTTGATAAGTTCAAG
CGTGCTTGCTTCTAAACTTTCTGCTTTAAATTTCACAGGCGATACTAATTCAAACAAACTTGAAATCAGCGATGAAGAAC
TGGCTACAAATTATGTCAATTTTTATGAATTTTCCACAGATAAAAAAAAGGCTGTATCATTAGCACAAAATTTCAATACT
CAAAATTGGAAAATCGATATCAGTGGAGAAATAGAAAAACCTTTAACTTTAAGCATAGAAGATATTTTAAAATTCCCTCT
AGAAGAAAGAATTTATCGTTTTCGCTGTGTTGAAACTTGGTCTATGGTGGTACCTTGGGTAGGCTTTGAATTGCGTCGCT
TGATTGAAATAGCAAAACCTACAAGCGAGGCAAAATTTGTTAAATTCACCACTCTTTTAGATAAGAGTCAATTTCCCGAT
CAAGACGCTTTATTTCCAACTATAGACTATCCTTATGTAGAAGGACTTCGCATGGATGAAGCTATGCATCCTCTTACCTT
GCTTGCAGTAGGAATGTATAAAAAAGCCTTAAAGCCTCAAAATGGTGCTCCAATTCGCCTTGTTGTTCCTTGGAAATATG
GCTTTAAAAGTATTAAATCCATAGTTAAAATAGAATTTACCAAAGAACAACCTAAATCCACTTGGGAAAGTTACGCTCCA
AGTGAATATGGTTTTTATGCTAATGTCAATCCTAATGTTTCTCATCCTAGATGGTCTCAAGCTAACGAGAGGGCTTTAGG
AGACTTCTTTACCAAGCCTACTTTAATGTTTAATGGATATGAAAAAGAAGTGGCAAGTTTATATAAAAACATGGACTTGA
AAGTGAATTTTTAA

Upstream 100 bases:

>100_bases
TAATAACCCTAGAAAAATTTGTGAAAAAATTCTACAAGAAATTTAATAATCATTATCCTTGTTATATTTTAATAATAAAA
ATTTTTAATAAGGAAAAATT

Downstream 100 bases:

>100_bases
TGCAGGCAAAATACTTTAAATTTCTTGCTTATTTTAGCTTTATCATAAGTTTAATTTATGGCTTTTATCACATCACAAAA
GCCTTTGATTTTGTAAAAGA

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MIITPENLYKKRRDFLKLGTGALISSSVLASKLSALNFTGDTNSNKLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNT
QNWKIDISGEIEKPLTLSIEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEIAKPTSEAKFVKFTTLLDKSQFPD
QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF

Sequences:

>Translated_297_residues
MIITPENLYKKRRDFLKLGTGALISSSVLASKLSALNFTGDTNSNKLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNT
QNWKIDISGEIEKPLTLSIEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEIAKPTSEAKFVKFTTLLDKSQFPD
QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF
>Mature_297_residues
MIITPENLYKKRRDFLKLGTGALISSSVLASKLSALNFTGDTNSNKLEISDEELATNYVNFYEFSTDKKKAVSLAQNFNT
QNWKIDISGEIEKPLTLSIEDILKFPLEERIYRFRCVETWSMVVPWVGFELRRLIEIAKPTSEAKFVKFTTLLDKSQFPD
QDALFPTIDYPYVEGLRMDEAMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=261, Percent_Identity=57.4712643678161, Blast_Score=316, Evalue=1e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 34200; Mature: 34200

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIITPENLYKKRRDFLKLGTGALISSSVLASKLSALNFTGDTNSNKLEISDEELATNYVN
CEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCEEEECHHHHHHHHHH
FYEFSTDKKKAVSLAQNFNTQNWKIDISGEIEKPLTLSIEDILKFPLEERIYRFRCVETW
EEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHH
SMVVPWVGFELRRLIEIAKPTSEAKFVKFTTLLDKSQFPDQDALFPTIDYPYVEGLRMDE
HHHHHHCCHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHH
AMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
HHCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEEECCCCCHHHHHHCCC
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MIITPENLYKKRRDFLKLGTGALISSSVLASKLSALNFTGDTNSNKLEISDEELATNYVN
CEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEECCCCCCCEEEECHHHHHHHHHH
FYEFSTDKKKAVSLAQNFNTQNWKIDISGEIEKPLTLSIEDILKFPLEERIYRFRCVETW
EEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEHHHHHHCCHHHHHHHHHHHHHH
SMVVPWVGFELRRLIEIAKPTSEAKFVKFTTLLDKSQFPDQDALFPTIDYPYVEGLRMDE
HHHHHHCCHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCHHCCCCHHH
AMHPLTLLAVGMYKKALKPQNGAPIRLVVPWKYGFKSIKSIVKIEFTKEQPKSTWESYAP
HHCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEEECCCCCHHHHHHCCC
SEYGFYANVNPNVSHPRWSQANERALGDFFTKPTLMFNGYEKEVASLYKNMDLKVNF
CCCCEEEECCCCCCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]