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The map label for this gene is hemD

Identifier: 153951222

GI number: 153951222

Start: 585866

End: 586495

Strand: Direct

Name: hemD

Synonym: JJD26997_0644

Alternate gene names: NA

Gene position: 585866-586495 (Clockwise)

Preceding gene: 153951985

Following gene: 153951092

Centisome position: 31.75

GC content: 26.51

Gene sequence:

>630_bases
ATGAAAATTTATCTCTTAAATGAAGCTCCTTTTGAAGGGGTGGAAAATCTTATTTTAAATGAGATTGTTTTTTATGATTT
TAGTGTGGATTTGAGTTTATATGATGCTTTAATCTGCACTTCAAAAAATGCTTTAAAAGCTTTGCAACATGCAAAAATCA
CTTTAAATTTCAAACTCAATTTATATGCTGTAGGACAAAGTACAGCTCAATATGCTAAAAATTTAGATTTTAAAAAGATT
AAATTTCCATCAAAGGCTTATGGAAAAGATCTTTTTCTTGAATTTAAAGAGGAATTAAAAACGCAAAAATGTTTGTATTT
AAGGGCTAAAAATATTGTTTCAACTTTAAATTTGGATCTTAAAAATGCGGGTGTGGATTTAGATGAAATTATTGTTTATG
AAAATGTTTTTAAAAAAGGTGACAAAGAGCTTATCCATCCTGCTATTTTTATATTTATCTCTCCTTTAAGTGTGGAAAAT
TTTTTAAAATTTTATAGCTTAAAAGAAGAAGATAAGGTTGTGGTTATAGGGCAAAGTACAGCAAAGAAGCTTTTAAATTT
TAAAAATCTTTATATATGCGAAAATCAAAGTCTTTTAGAGTGTGTTAAGCTTGCTAAGACTTTGGTTTAA

Upstream 100 bases:

>100_bases
GAATTAAGAGGTATAAATTTAAGCGGTGTGGCTGTGGTTAGGGCGATCATGGATGCTAAAGATGCTTTTTTGGCGGCTAA
AGAGCTAAAGCGTAAAATTT

Downstream 100 bases:

>100_bases
TTTTTTAAATTCCAAAAATTTTCTTTGGGATAAATAATAATGCTTTTTGTGAGTAAAATTTCATCATTGACATTTTTATC
ACGATTTAAGGCAATACTAA

Product: uroporphyrinogen-III synthase

Products: NA

Alternate protein names: Uroporphyrinogen III Cosynthase HemD; Uroporphyrinogen-III Synthase HemD; Uroporphyrinogen-III Synthetase; Uroporphyrinogen III Cosynthase

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKIYLLNEAPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQYAKNLDFKKI
KFPSKAYGKDLFLEFKEELKTQKCLYLRAKNIVSTLNLDLKNAGVDLDEIIVYENVFKKGDKELIHPAIFIFISPLSVEN
FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLECVKLAKTLV

Sequences:

>Translated_209_residues
MKIYLLNEAPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQYAKNLDFKKI
KFPSKAYGKDLFLEFKEELKTQKCLYLRAKNIVSTLNLDLKNAGVDLDEIIVYENVFKKGDKELIHPAIFIFISPLSVEN
FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLECVKLAKTLV
>Mature_209_residues
MKIYLLNEAPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNALKALQHAKITLNFKLNLYAVGQSTAQYAKNLDFKKI
KFPSKAYGKDLFLEFKEELKTQKCLYLRAKNIVSTLNLDLKNAGVDLDEIIVYENVFKKGDKELIHPAIFIFISPLSVEN
FLKFYSLKEEDKVVVIGQSTAKKLLNFKNLYICENQSLLECVKLAKTLV

Specific function: Unknown

COG id: COG1587

COG function: function code H; Uroporphyrinogen-III synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23924; Mature: 23924

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYLLNEAPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNALKALQHAKITLNFKLN
CEEEEECCCCHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCHHHHHHHHHCEEEEEEEEE
LYAVGQSTAQYAKNLDFKKIKFPSKAYGKDLFLEFKEELKTQKCLYLRAKNIVSTLNLDL
EEEECCHHHHHHHCCCCEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KNAGVDLDEIIVYENVFKKGDKELIHPAIFIFISPLSVENFLKFYSLKEEDKVVVIGQST
HCCCCCHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCHHHHHHHHCCCCCCCEEEEECHH
AKKLLNFKNLYICENQSLLECVKLAKTLV
HHHHHCCCCEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKIYLLNEAPFEGVENLILNEIVFYDFSVDLSLYDALICTSKNALKALQHAKITLNFKLN
CEEEEECCCCHHHHHHHHHHHHHEEEEEECHHHHHHHHHCCHHHHHHHHHCEEEEEEEEE
LYAVGQSTAQYAKNLDFKKIKFPSKAYGKDLFLEFKEELKTQKCLYLRAKNIVSTLNLDL
EEEECCHHHHHHHCCCCEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KNAGVDLDEIIVYENVFKKGDKELIHPAIFIFISPLSVENFLKFYSLKEEDKVVVIGQST
HCCCCCHHHHHHHHHHHCCCCHHHHHHEEEEEECCCCHHHHHHHHCCCCCCCEEEEECHH
AKKLLNFKNLYICENQSLLECVKLAKTLV
HHHHHCCCCEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA