| Definition | Campylobacter jejuni subsp. doylei 269.97, complete genome. |
|---|---|
| Accession | NC_009707 |
| Length | 1,845,106 |
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The map label for this gene is 153951216
Identifier: 153951216
GI number: 153951216
Start: 13114
End: 14805
Strand: Direct
Name: 153951216
Synonym: JJD26997_0008
Alternate gene names: NA
Gene position: 13114-14805 (Clockwise)
Preceding gene: 153951980
Following gene: 153951673
Centisome position: 0.71
GC content: 24.47
Gene sequence:
>1692_bases ATGGCTGAAATGAAAACAGAAAGAAAAAGTGTTTTAGATTATCTTTCTAAAAATAAATTTTTAATCCCAATGTATCAAAG ACCTTATGCTTGGACATTAGAAGAATGTGAACAGTTGTGGAATGATATTGTTACTTTTTTTAATGATGAGGATAGAAAAC CTGAAGATGAATATTTTTTGGGTAGTATTGTGATGTATAAGCAAAATAATCATCAAAATATTATAGATGGACAACAAAGA ACAATATCTTTAAGTTTGTTGTTAAAAGCTTTATATGTAAAAGCTTTTAAAGATAGAAGTGAAGAAACAAAAAATCTTGT GGCAATGCTTGAAAGCTGTTTATGGGATATTGATGATATTAGCGGAAAAGCAGACTATAACGCGTCACATTTGGAAAGTG ATGTTATTACGAAAGAAGATGAAGATATATTAAAACAAATTTTGACTAATGAATATAGACTAGAAAATAATGATATTGAA ACAAAGATTAAAAAAGTTAAATCTAATTATGAGAAAAATTATTTATTTTTTCTTTTAAAATCTGATGAATTTGCAAAAGA AAATCCAACTAAATGGGAAAAATTTTGTGTAGTTTTATTAAAATCTTGTATTTTGCTTCCTATAGAATGCGAAGGTTATG ATGAAGATTCTAGGCTTGAGAATGCTTTAAGAATTTTTAATACTTTAAATAATAGAGGAATTCCACTTAGTGATTCTGAT ATTTTTAAAAGTATTATTTTTAAAAGCAAAAAAACTTTAGAAAGAAGAAAAGAATTTGCAAATAAGTGGAAAGAACTTGA AGATAAAAAAGATATGGATTTTATATTTAGAAATTATATGCATGTTATTCGTGCTAGAAATAAAATTAAAACAAGTGAAA TTGGTTTAAGAGTTTTTTTTACTAAAGAGTACAAGAATATTTTACAAGATGATAATATTATAAGTGAAATTGAACAGCTT AGTAAATTTTGGAATGATGAATTTAGTGATTTATATAATAATAGGTCATATCAATTTTATGAAGTTTTAAATGAGTTACC AAATGAATATTGGAAATATTTAGATAGTGCATATTATATGTATTGTCAAGATAAAAAAATAAATTATTATAAAAACCATG AGAATTTTTTAGCAAAAATAATTGCTAATTTTTTAGTAAAACTTATCAATAAGCCGACTATTGCAGAAGTCAAACCAATT GTTTTTAATGCATATACATCATTATATTCTAAAGGAGAACTAAATTTTCAGACAGATTCAAAGCAAATTTTAGAAAATGA GATATTGTTTAAAGAACAGTTTTTTAAAGCAAATAAACTTATTCCAGCACTATTAACTCTTAATCTTTATATAAAATATC CGAATCAAAAAACTGATATTAAAGCTGAAATTGAACATATTTTCCCAAAAACTACACAATGGAGACCAAGTTATACAGGT TGGGATAAAGAAGAAGCAAAGTCTTACATTGAATCTATTGGTAATAAAATGTGGCTCGAAAAAAGATTAAATATTAAAGC AGGTAACAATTATTTTGATGAGAAGAAAGAAAAATATAAAGAATCAAACTTTTTAGAAGCACAAGAATTATCCAAGTATA CTAAAAATGATTGGCTAAAGGAAGATATTGAAAAGAGAAATGAAGAGATTTATAATAGATTAGTAGACTTTTTTAAGCAA AATATTGATTAG
Upstream 100 bases:
>100_bases AAAGATGTTAAAAATGCTTGATCTTTGTAAAAATGAAAAAGATCCAAATTTAGCAGCATTTTTGAAAATCACACAATAAA TTTTTATTAGAGGAGAAATT
Downstream 100 bases:
>100_bases TTTTAAGGAGTAAAAAATGGGAAATACAAGAGGTTTTTTGGACTTTAAAAGAATGGATTTTAAAAAAATTGCTCCTAAAG AAAGGATTTTAAATTACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MAEMKTERKSVLDYLSKNKFLIPMYQRPYAWTLEECEQLWNDIVTFFNDEDRKPEDEYFLGSIVMYKQNNHQNIIDGQQR TISLSLLLKALYVKAFKDRSEETKNLVAMLESCLWDIDDISGKADYNASHLESDVITKEDEDILKQILTNEYRLENNDIE TKIKKVKSNYEKNYLFFLLKSDEFAKENPTKWEKFCVVLLKSCILLPIECEGYDEDSRLENALRIFNTLNNRGIPLSDSD IFKSIIFKSKKTLERRKEFANKWKELEDKKDMDFIFRNYMHVIRARNKIKTSEIGLRVFFTKEYKNILQDDNIISEIEQL SKFWNDEFSDLYNNRSYQFYEVLNELPNEYWKYLDSAYYMYCQDKKINYYKNHENFLAKIIANFLVKLINKPTIAEVKPI VFNAYTSLYSKGELNFQTDSKQILENEILFKEQFFKANKLIPALLTLNLYIKYPNQKTDIKAEIEHIFPKTTQWRPSYTG WDKEEAKSYIESIGNKMWLEKRLNIKAGNNYFDEKKEKYKESNFLEAQELSKYTKNDWLKEDIEKRNEEIYNRLVDFFKQ NID
Sequences:
>Translated_563_residues MAEMKTERKSVLDYLSKNKFLIPMYQRPYAWTLEECEQLWNDIVTFFNDEDRKPEDEYFLGSIVMYKQNNHQNIIDGQQR TISLSLLLKALYVKAFKDRSEETKNLVAMLESCLWDIDDISGKADYNASHLESDVITKEDEDILKQILTNEYRLENNDIE TKIKKVKSNYEKNYLFFLLKSDEFAKENPTKWEKFCVVLLKSCILLPIECEGYDEDSRLENALRIFNTLNNRGIPLSDSD IFKSIIFKSKKTLERRKEFANKWKELEDKKDMDFIFRNYMHVIRARNKIKTSEIGLRVFFTKEYKNILQDDNIISEIEQL SKFWNDEFSDLYNNRSYQFYEVLNELPNEYWKYLDSAYYMYCQDKKINYYKNHENFLAKIIANFLVKLINKPTIAEVKPI VFNAYTSLYSKGELNFQTDSKQILENEILFKEQFFKANKLIPALLTLNLYIKYPNQKTDIKAEIEHIFPKTTQWRPSYTG WDKEEAKSYIESIGNKMWLEKRLNIKAGNNYFDEKKEKYKESNFLEAQELSKYTKNDWLKEDIEKRNEEIYNRLVDFFKQ NID >Mature_562_residues AEMKTERKSVLDYLSKNKFLIPMYQRPYAWTLEECEQLWNDIVTFFNDEDRKPEDEYFLGSIVMYKQNNHQNIIDGQQRT ISLSLLLKALYVKAFKDRSEETKNLVAMLESCLWDIDDISGKADYNASHLESDVITKEDEDILKQILTNEYRLENNDIET KIKKVKSNYEKNYLFFLLKSDEFAKENPTKWEKFCVVLLKSCILLPIECEGYDEDSRLENALRIFNTLNNRGIPLSDSDI FKSIIFKSKKTLERRKEFANKWKELEDKKDMDFIFRNYMHVIRARNKIKTSEIGLRVFFTKEYKNILQDDNIISEIEQLS KFWNDEFSDLYNNRSYQFYEVLNELPNEYWKYLDSAYYMYCQDKKINYYKNHENFLAKIIANFLVKLINKPTIAEVKPIV FNAYTSLYSKGELNFQTDSKQILENEILFKEQFFKANKLIPALLTLNLYIKYPNQKTDIKAEIEHIFPKTTQWRPSYTGW DKEEAKSYIESIGNKMWLEKRLNIKAGNNYFDEKKEKYKESNFLEAQELSKYTKNDWLKEDIEKRNEEIYNRLVDFFKQN ID
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67666; Mature: 67534
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEMKTERKSVLDYLSKNKFLIPMYQRPYAWTLEECEQLWNDIVTFFNDEDRKPEDEYFL CCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH GSIVMYKQNNHQNIIDGQQRTISLSLLLKALYVKAFKDRSEETKNLVAMLESCLWDIDDI CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHCC SGKADYNASHLESDVITKEDEDILKQILTNEYRLENNDIETKIKKVKSNYEKNYLFFLLK CCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE SDEFAKENPTKWEKFCVVLLKSCILLPIECEGYDEDSRLENALRIFNTLNNRGIPLSDSD CCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH IFKSIIFKSKKTLERRKEFANKWKELEDKKDMDFIFRNYMHVIRARNKIKTSEIGLRVFF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCEEEEE TKEYKNILQDDNIISEIEQLSKFWNDEFSDLYNNRSYQFYEVLNELPNEYWKYLDSAYYM EHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEE YCQDKKINYYKNHENFLAKIIANFLVKLINKPTIAEVKPIVFNAYTSLYSKGELNFQTDS EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCH KQILENEILFKEQFFKANKLIPALLTLNLYIKYPNQKTDIKAEIEHIFPKTTQWRPSYTG HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC WDKEEAKSYIESIGNKMWLEKRLNIKAGNNYFDEKKEKYKESNFLEAQELSKYTKNDWLK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EDIEKRNEEIYNRLVDFFKQNID HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEMKTERKSVLDYLSKNKFLIPMYQRPYAWTLEECEQLWNDIVTFFNDEDRKPEDEYFL CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH GSIVMYKQNNHQNIIDGQQRTISLSLLLKALYVKAFKDRSEETKNLVAMLESCLWDIDDI CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHCC SGKADYNASHLESDVITKEDEDILKQILTNEYRLENNDIETKIKKVKSNYEKNYLFFLLK CCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE SDEFAKENPTKWEKFCVVLLKSCILLPIECEGYDEDSRLENALRIFNTLNNRGIPLSDSD CCCCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHH IFKSIIFKSKKTLERRKEFANKWKELEDKKDMDFIFRNYMHVIRARNKIKTSEIGLRVFF HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCEEEEE TKEYKNILQDDNIISEIEQLSKFWNDEFSDLYNNRSYQFYEVLNELPNEYWKYLDSAYYM EHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEE YCQDKKINYYKNHENFLAKIIANFLVKLINKPTIAEVKPIVFNAYTSLYSKGELNFQTDS EEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCH KQILENEILFKEQFFKANKLIPALLTLNLYIKYPNQKTDIKAEIEHIFPKTTQWRPSYTG HHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC WDKEEAKSYIESIGNKMWLEKRLNIKAGNNYFDEKKEKYKESNFLEAQELSKYTKNDWLK CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH EDIEKRNEEIYNRLVDFFKQNID HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA