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The map label for this gene is rhtC [H]

Identifier: 153951062

GI number: 153951062

Start: 41479

End: 42081

Strand: Direct

Name: rhtC [H]

Synonym: JJD26997_0035

Alternate gene names: 153951062

Gene position: 41479-42081 (Clockwise)

Preceding gene: 153951810

Following gene: 153952296

Centisome position: 2.25

GC content: 24.21

Gene sequence:

>603_bases
TTGATGACTTTTTTATTTATTTTTGGTATTCATTTATCTGCACTCTTGACACCAGGACCTGATTTTTTTCTCGTTAGTGC
TTATGCTTTAAAATTTAGTTTTAAAGAAGCCTTAAAAGCGGCATTTGGTGTAAGTTTGGCAATATTGCTTTGGATTATTT
TTTCTTTAACTGGACTTAAAATTCTTTTTGATACTTTTCCTTTTATCCAACTTGTATTATCTACTTTAGGAGCTATGTAT
CTGTTTTATCTTGCTTATTTGCTTTTGAAAAATATTTCCAATGAAATACACTTTACAAATAGTATAAAAATTTCACAACC
ATTTTTAGGCGGTTTTTTGACAAATATTACAAATGCTAAAGCTATTTTTTATTTTGGAAGTATTTTTTCTAGCTTAAATT
TTACAGGAGATAATTTTGAAATCTTTTTGTTAGTTATTATCCTCGGTTTAGAATCTTTAATTTATTTTATTTTCATTGCT
TTTTTATTTTCAAATTTAAAAATTAAAATGTTATATCTAAGTCATTATAAAAAGATTGATTTGTTTTGCGCTTTTATTTT
TATAAGTTTTGCTTGTTTTACACTTACAACAATTTATTTTTAG

Upstream 100 bases:

>100_bases
TTTTGCAATATTATTTTCTATGTTTGATTATTTGTATTTTTGTTTTTAGAAATTTTTGAGAAATTTGTGATAAGTATTGT
AAAAAACTACAAATGGAATT

Downstream 100 bases:

>100_bases
GAGCATAAATGTTGATACAAATAAAAGAAATTAATCAGCAAAATATTACTGATATTTTATATGGAAAACCTTGTTTTTAT
CCTTTAGGTTGTATATTTAA

Product: threonine efflux protein

Products: Proton [Cytoplasm]; L-threonine [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MMTFLFIFGIHLSALLTPGPDFFLVSAYALKFSFKEALKAAFGVSLAILLWIIFSLTGLKILFDTFPFIQLVLSTLGAMY
LFYLAYLLLKNISNEIHFTNSIKISQPFLGGFLTNITNAKAIFYFGSIFSSLNFTGDNFEIFLLVIILGLESLIYFIFIA
FLFSNLKIKMLYLSHYKKIDLFCAFIFISFACFTLTTIYF

Sequences:

>Translated_200_residues
MMTFLFIFGIHLSALLTPGPDFFLVSAYALKFSFKEALKAAFGVSLAILLWIIFSLTGLKILFDTFPFIQLVLSTLGAMY
LFYLAYLLLKNISNEIHFTNSIKISQPFLGGFLTNITNAKAIFYFGSIFSSLNFTGDNFEIFLLVIILGLESLIYFIFIA
FLFSNLKIKMLYLSHYKKIDLFCAFIFISFACFTLTTIYF
>Mature_200_residues
MMTFLFIFGIHLSALLTPGPDFFLVSAYALKFSFKEALKAAFGVSLAILLWIIFSLTGLKILFDTFPFIQLVLSTLGAMY
LFYLAYLLLKNISNEIHFTNSIKISQPFLGGFLTNITNAKAIFYFGSIFSSLNFTGDNFEIFLLVIILGLESLIYFIFIA
FLFSNLKIKMLYLSHYKKIDLFCAFIFISFACFTLTTIYF

Specific function: Conducts the efflux of threonine [H]

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI48994978, Length=203, Percent_Identity=33.4975369458128, Blast_Score=114, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22828; Mature: 22828

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTFLFIFGIHLSALLTPGPDFFLVSAYALKFSFKEALKAAFGVSLAILLWIIFSLTGLK
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFDTFPFIQLVLSTLGAMYLFYLAYLLLKNISNEIHFTNSIKISQPFLGGFLTNITNAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHCCCH
AIFYFGSIFSSLNFTGDNFEIFLLVIILGLESLIYFIFIAFLFSNLKIKMLYLSHYKKID
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
LFCAFIFISFACFTLTTIYF
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMTFLFIFGIHLSALLTPGPDFFLVSAYALKFSFKEALKAAFGVSLAILLWIIFSLTGLK
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFDTFPFIQLVLSTLGAMYLFYLAYLLLKNISNEIHFTNSIKISQPFLGGFLTNITNAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHHHCCCH
AIFYFGSIFSSLNFTGDNFEIFLLVIILGLESLIYFIFIAFLFSNLKIKMLYLSHYKKID
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
LFCAFIFISFACFTLTTIYF
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-threonine [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + L-threonine [Cytoplasm] = Proton [Cytoplasm] + L-threonine [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]