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The map label for this gene is 153950896

Identifier: 153950896

GI number: 153950896

Start: 189573

End: 190850

Strand: Reverse

Name: 153950896

Synonym: YpsIP31758_0168

Alternate gene names: NA

Gene position: 190850-189573 (Counterclockwise)

Preceding gene: 153949224

Following gene: 153948870

Centisome position: 4.04

GC content: 49.69

Gene sequence:

>1278_bases
ATGACATTACTGATTGGGTTATTTAGCACCTCCGCATGGTCAAACTGCACCCGTATTACCGCACAAAATCAGATAAGTTC
CAGTGATGGTACCGCCGCTTCATGGTTGGGTTCCAGAGACGATAATAATGGTTCGCTCAACTTACCCAGTATTGTTGATC
TCAGCACCAATGCGAATTTTCAGCCCGATGGCACGTTACTGGCATCAGCAACCTCAGACTTTACGACCTTTGCAGTGAAT
ACCGGTTATGCCCTTGACCAGGTCCTCTTTCGCTGTGATGCGGCTGATGTGGATCAGCTCTATGAGATGTATGCCACTAA
CGGTGACAGCACTTATGGTGGCAGATATGAAGACGGCACGATTGCAGGCAATGTGTCCTATGGCTATGCTACTACAGTGA
TGAATGTGGTTATTCGGTTTACCAACCTGGCAACGGGGGAGTATTACGCTCGTATTTGGAAAGGCCGACGCTTAACCGGG
CTTGATACTGACAGTAGCGGACGGATTTTAGTTAAAGCGAAAAATTTCAGTAATGTGTATACCGAGCTATTTCGTATTGA
TTATGCCCGTAGTGGCGCTAACAATACGCCATCTTATCTCTATGGACGTAGTCAGCCCAATGCCTATATCGCGTTTAAAG
GGCCAGGAATTACTGGCCCGATTGAGGGTACTGACTCGTACTCAAACTGGCCCGGTTGGTATTCTACCTGGCCTGCATCA
CTTGGTTTGTACAAATACGTCACATTCCGCCGGACCACTATTTGTGCGGTAAGCAACTTTACCCCGACGGTCGTGTTACC
CAGGATTTCGGTGGCAGAACTGAATAATGGGAATACCAGCTCCGCTGATTTTAATGTGGATTTTCAGTGCCAGACCGGGA
TTAACTCTGGCGTGACGGCTGGCACAGTGGCGATGGGATTTTTAGTGCCGGCGGCCAATGCAGCCAAAGCTCAGGCGCTG
GGGTTAATGAACGGCAACGGGGGAGTAAGCCATTTGGTCTCCGATAACTATGGCGCTGCTGGCACCGCGGGCGGGGTGGG
TATTCGCATCTACCGTAACAATAGCCCGATGTATCTACTGTCAAAAAACGTAACTCAGACAGGTAACAATGGGGGGTGGT
ATGGTATCTTACAGGGCGCACAAGAAACCACAGGCAGCGTAGATGGGGGGAACAGTTACACCGAAACTTTCCGTGCTGAG
TTAAGCAAAATAAGCGGGCAAACGGTGACCGCCGGAGCAGTGAATGCACATGCGCAAGTGGTTATCCGTGTCCAATAA

Upstream 100 bases:

>100_bases
GAGAAAAATAATGTTAAGACCAACAAAGCCATTAATATCTTCCGGCATTTCGCAGTCTACCACTGCGGTCTATTGCCGCC
GCCCATATTTTCTTGCTGGG

Downstream 100 bases:

>100_bases
TATAATGCTTAGCCGTATCAACCGTAGGCTCCGTGGGTTGCTGCTACTCATGACCACCTGTCGTGTACTGACTCTCCCTG
CGCTGACGATTGGCGTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Adhesin MrkD; Fimbriae Usher Protein; Fimbrial Subunit Outer Membrane Protein; Fimbriae; Fimbrial Adhesin; Fimbrial Protein Domain-Containing Protein; Fimbrial Protein

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MTLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVN
TGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTG
LDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPAS
LGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQAL
GLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAE
LSKISGQTVTAGAVNAHAQVVIRVQ

Sequences:

>Translated_425_residues
MTLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVN
TGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTG
LDTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPAS
LGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQAL
GLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAE
LSKISGQTVTAGAVNAHAQVVIRVQ
>Mature_424_residues
TLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPSIVDLSTNANFQPDGTLLASATSDFTTFAVNT
GYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGTIAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTGL
DTDSSGRILVKAKNFSNVYTELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPASL
GLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQCQTGINSGVTAGTVAMGFLVPAANAAKAQALG
LMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLLSKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAEL
SKISGQTVTAGAVNAHAQVVIRVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45207; Mature: 45076

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPSIVDLSTNANF
CEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEHCCCCCCCCCCCEECCEEEEECCCCCC
QPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGT
CCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCE
IAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVY
EEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHH
TELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPAS
HHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
LGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQCQTGINSGVTA
CCCEEEEEEECEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCH
GTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLL
HHHHHHHHCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEE
SKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQV
ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECEECCEEEE
VIRVQ
EEEEC
>Mature Secondary Structure 
TLLIGLFSTSAWSNCTRITAQNQISSSDGTAASWLGSRDDNNGSLNLPSIVDLSTNANF
EEEEEECCCCCCCCEEEEEECCCCCCCCCCEEHCCCCCCCCCCCEECCEEEEECCCCCC
QPDGTLLASATSDFTTFAVNTGYALDQVLFRCDAADVDQLYEMYATNGDSTYGGRYEDGT
CCCCCEEEECCCCEEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCE
IAGNVSYGYATTVMNVVIRFTNLATGEYYARIWKGRRLTGLDTDSSGRILVKAKNFSNVY
EEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCEEEEEECCCHHHH
TELFRIDYARSGANNTPSYLYGRSQPNAYIAFKGPGITGPIEGTDSYSNWPGWYSTWPAS
HHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
LGLYKYVTFRRTTICAVSNFTPTVVLPRISVAELNNGNTSSADFNVDFQCQTGINSGVTA
CCCEEEEEEECEEEEEECCCCCEEEECCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCH
GTVAMGFLVPAANAAKAQALGLMNGNGGVSHLVSDNYGAAGTAGGVGIRIYRNNSPMYLL
HHHHHHHHCCCCCCCCHHEEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCEEEE
SKNVTQTGNNGGWYGILQGAQETTGSVDGGNSYTETFRAELSKISGQTVTAGAVNAHAQV
ECCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECEECCEEEE
VIRVQ
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA