Click here to switch to the map view.

The map label for this gene is sufE

Identifier: 153950798

GI number: 153950798

Start: 2020579

End: 2021001

Strand: Direct

Name: sufE

Synonym: YpsIP31758_1746

Alternate gene names: 153950798

Gene position: 2020579-2021001 (Clockwise)

Preceding gene: 153947303

Following gene: 153948284

Centisome position: 42.78

GC content: 47.75

Gene sequence:

>423_bases
ATGGCTGGTTTGCCAGATAGAGATAAATTAATTCGTAACTTTTCCCGCTGTTTAAATTGGGAAGAAAAATACCTGTACAT
CATTGAACTCGGCGGGCAGTTAGCCCCGTTGACCGAACAACAGCGCCACCCAGAGAATCTGATCTCCGGTTGCCAGAGTC
AGGTCTGGATCGCGATGACATTGTCTGCTGAAGGCCATGTGATATTTGCTGGCGATAGCGATGCCGCTATCGTTAAAGGT
CTGGTCGCCGTGGTATTCATCCTTTATCACGATTTAACACCTCAACAGATAGTCTCTCTGGATGTGCGTCCATTCTTTGC
TGATTTAGCGCTTAGCCAGCATTTGACACCTTCACGCTCACAAGGTCTGGAGGCGATGATCCGTGCTATTCGCACTAAAG
TTGCCGATTTATCAGCGCATTGA

Upstream 100 bases:

>100_bases
TTGCTGGGGTGAGAGTCTAAGCACCCACGACAGGCAATACCAAAGCCGACTATTCTTTCAGCAGTCGGCTTTTATTTTTT
ACGTATTCAGGAAATATGCT

Downstream 100 bases:

>100_bases
TGCAGGCTAATATTTTGCTCTTTATTTATTGGGTTTTGACCATTTTTGCGTTGCGAGTCACCGTATTAAAATGGTGAGAT
TTCAGCAGCTTAAATCGGCG

Product: cysteine desufuration protein SufE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAGLPDRDKLIRNFSRCLNWEEKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKG
LVAVVFILYHDLTPQQIVSLDVRPFFADLALSQHLTPSRSQGLEAMIRAIRTKVADLSAH

Sequences:

>Translated_140_residues
MAGLPDRDKLIRNFSRCLNWEEKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKG
LVAVVFILYHDLTPQQIVSLDVRPFFADLALSQHLTPSRSQGLEAMIRAIRTKVADLSAH
>Mature_139_residues
AGLPDRDKLIRNFSRCLNWEEKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMTLSAEGHVIFAGDSDAAIVKGL
VAVVFILYHDLTPQQIVSLDVRPFFADLALSQHLTPSRSQGLEAMIRAIRTKVADLSAH

Specific function: Participates in cysteine desulfuration mediated by sufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L-alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Fun

COG id: COG2166

COG function: function code R; SufE protein probably involved in Fe-S center assembly

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sufE family

Homologues:

Organism=Escherichia coli, GI1787969, Length=126, Percent_Identity=68.2539682539683, Blast_Score=184, Evalue=1e-48,
Organism=Escherichia coli, GI1789176, Length=123, Percent_Identity=34.9593495934959, Blast_Score=82, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SUFE_YERP3 (A7FHJ3)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001400721.1
- ProteinModelPortal:   A7FHJ3
- SMR:   A7FHJ3
- STRING:   A7FHJ3
- GeneID:   5386476
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_1746
- NMPDR:   fig|349747.3.peg.791
- eggNOG:   COG2166
- HOGENOM:   HBG608886
- OMA:   YEYILWL
- ProtClustDB:   PRK09296
- BioCyc:   YPSE349747:YPSIP31758_1746-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01832
- InterPro:   IPR003808

Pfam domain/function: PF02657 SufE

EC number: NA

Molecular weight: Translated: 15568; Mature: 15437

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: ACT_SITE 51-51

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGLPDRDKLIRNFSRCLNWEEKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMT
CCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHCCHHHHHHCCCCCEEEEEE
LSAEGHVIFAGDSDAAIVKGLVAVVFILYHDLTPQQIVSLDVRPFFADLALSQHLTPSRS
ECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCHH
QGLEAMIRAIRTKVADLSAH
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGLPDRDKLIRNFSRCLNWEEKYLYIIELGGQLAPLTEQQRHPENLISGCQSQVWIAMT
CCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHCCHHHHHHCCCCCEEEEEE
LSAEGHVIFAGDSDAAIVKGLVAVVFILYHDLTPQQIVSLDVRPFFADLALSQHLTPSRS
ECCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCCCCHH
QGLEAMIRAIRTKVADLSAH
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA