Click here to switch to the map view.

The map label for this gene is pilS

Identifier: 153950735

GI number: 153950735

Start: 4204097

End: 4204684

Strand: Reverse

Name: pilS

Synonym: YpsIP31758_3729

Alternate gene names: NA

Gene position: 4204684-4204097 (Counterclockwise)

Preceding gene: 153949596

Following gene: 153950514

Centisome position: 89.02

GC content: 49.15

Gene sequence:

>588_bases
ATGTCATTACCAGTAGCATCCAGAAAACAACCCCATAGTGGCTGGGGTATCCTTGAGAGCGGTGGCGTAGCGCTTGTAGT
CATCGTCGTGATTGCGGTTGTACTAGGCGGTATTTATACGCTGTGGAACCGAAAGGATATCGCCTTGGAGTCTGCCAATG
TGCAGAGCATCATAACGTCAACGCAAGGGCTGCTAAAAGGGCGTAATGGCTACAGTTTTGCCAGTGGGACAACAATGACT
GGCATACTTATTCAGGTCGGTGGCGTACCTAAGAACATGATGACGAAAGGTAATGTTACCGCCAGCACCGCGACGCTATG
GAATACATGGGGTGGGCAGGTTATTGTTGCTCCTGTAACTGCGAACGGTTTTAATCACGGCTTTACCCTGACCTATCAGA
AAGTTCCGCAGAGTGTGTGTATTGCCATAACCACACGCCTCAGTGCTGGTGGCAGTATGTCTGGCATTACCATCAATAGC
ACCGTTTATAGTGATGGAAATATCACTGCCGAAAATGCGGGCACAACCTGTGTGAAGGACACTGGCAGAATCGGGATGAA
TACACTTACCTTCACGGTTAACGGTTGA

Upstream 100 bases:

>100_bases
TCTCTCTGTTACTGATTTTCAGTTTCTTCTTACTCATCTTGTCTATGGTGATGCAAATTCAGGATATGACCAGTGACTCA
ATGTAATAAGGGATCCGATA

Downstream 100 bases:

>100_bases
CCATCATCACGTTGGCACTCCCCTGGTTATTTGTGCTGCTGTTATTTTTGCTGGCGCTGCGGTTACTTGATCCAATCACC
CGACAAGTCAGTCTGTTCCT

Product: type IV pilus biogenesis protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein; Type IV Prepilin Cluster; TypeIV Prepilin; Prepilin; PilS Protein; PilS Type IV Pilus Prepilin

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSLPVASRKQPHSGWGILESGGVALVVIVVIAVVLGGIYTLWNRKDIALESANVQSIITSTQGLLKGRNGYSFASGTTMT
GILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVTANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINS
TVYSDGNITAENAGTTCVKDTGRIGMNTLTFTVNG

Sequences:

>Translated_195_residues
MSLPVASRKQPHSGWGILESGGVALVVIVVIAVVLGGIYTLWNRKDIALESANVQSIITSTQGLLKGRNGYSFASGTTMT
GILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVTANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINS
TVYSDGNITAENAGTTCVKDTGRIGMNTLTFTVNG
>Mature_194_residues
SLPVASRKQPHSGWGILESGGVALVVIVVIAVVLGGIYTLWNRKDIALESANVQSIITSTQGLLKGRNGYSFASGTTMTG
ILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVTANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINST
VYSDGNITAENAGTTCVKDTGRIGMNTLTFTVNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20212; Mature: 20081

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPVASRKQPHSGWGILESGGVALVVIVVIAVVLGGIYTLWNRKDIALESANVQSIITS
CCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
TQGLLKGRNGYSFASGTTMTGILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVT
HHHHHCCCCCCEECCCCEEEEEEEEECCCCHHHEECCCCEEEEEEEEECCCCEEEEEEEE
ANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINSTVYSDGNITAENAGTTCVKD
CCCCCCCEEEEHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCEEEEC
TGRIGMNTLTFTVNG
CCCCCCEEEEEEECC
>Mature Secondary Structure 
SLPVASRKQPHSGWGILESGGVALVVIVVIAVVLGGIYTLWNRKDIALESANVQSIITS
CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHH
TQGLLKGRNGYSFASGTTMTGILIQVGGVPKNMMTKGNVTASTATLWNTWGGQVIVAPVT
HHHHHCCCCCCEECCCCEEEEEEEEECCCCHHHEECCCCEEEEEEEEECCCCEEEEEEEE
ANGFNHGFTLTYQKVPQSVCIAITTRLSAGGSMSGITINSTVYSDGNITAENAGTTCVKD
CCCCCCCEEEEHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCEEEEC
TGRIGMNTLTFTVNG
CCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA