| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is mtnA [H]
Identifier: 153950389
GI number: 153950389
Start: 3583925
End: 3584965
Strand: Direct
Name: mtnA [H]
Synonym: YpsIP31758_3179
Alternate gene names: 153950389
Gene position: 3583925-3584965 (Clockwise)
Preceding gene: 153946828
Following gene: 153947866
Centisome position: 75.88
GC content: 55.62
Gene sequence:
>1041_bases ATGCAGACGCTTAACACCCTCGACTTACAGACCACCAGCTTAAAAATTGTCAATGGTCAGCTTTGGATCCTTGACCAGCA AGCACTGCCGCAGCGTCAAGAGTGGCTACTAGCCGATACCGTCGCCTCGTTGATTGAACATATTCAGGCGCTGCGGGTTC GTGGTGCGCCACTTATTGGCTTGTCAGCCAGCCTGCTCTTGGCGCTACTGGCTGAACGTGGTTTATCGCAGGCTTTACTT GAGCAAGCATTGATTGCCTTGCGTGAGTCACGCCCGACTGCCGTTAACCTCATGAATAATCTGGCACGGATGCAGCAAGC GTTATTACAGCCCAATTGGGTTACGGCGATGGCCGCTGAAGCGCTACGATTAGTCGATGAAGACCGTGAGTTGTGTGAGC GTATTGCCCAGCATGGGGCGGCACTAGTTAAACCCGGTAGCAACCTATTGACCCATTGCAATACTGGCGGGCTGGCCACT GCCGGGATCGGCACCGCGATTGGCGTCTTACTGCGCGCCCATCAGCAGGGCAACCTCCGACAGGTTTGGGTTGATGAAAC CCGGCCCTTATTACAAGGTGGGCGTTTAACCGCCTGGGAGTTAGGTGAATTGGGGATTCCCTATCAATTGATTTGCGATT CGATGGCCGCCAGCCTGATGGCTCAGGGCCAAGTGGATGCTATCTGGGTCGGCGCTGATCGCATTGCTGCCAACGGTGAT GTGGCGAACAAAATTGGCACCTACAGCCTGGCGGTATTGGCGCATTATCACCGAATTCCGTTCTATGTTGCCGCACCGCA CACCACCCACGATCCAGATTGCCCTGATGGAGCAGCGATCCCGATTGAACAACGTGCTGCCAGTGAGGTGACCGGTGTCT CTGGCGGATTTGGTCATTGCCAGTGGGCACCAGAAGACGCGGCGGTGTACAACCCAGCCTTTGATGTCACCCCTGCGGCA TTGATCAGTGGTTGGGTGTTAGATAGCGGAGTGATCACACCTGAACAGGTCGCGGCAGGCTTTTTCCAGCCTCACCGCTA G
Upstream 100 bases:
>100_bases TGTATTTAGGCGTAAAAACATATGGACGTCTATACATCCGTAAAACATGTTGGCAGAATAAGAAACCAGATGCAATAACG CAACATGGATTTAACTGACT
Downstream 100 bases:
>100_bases CAATCAATACCCGATACTTTATATTTCTTAATATTTCTTAGTTTAGGCGAGGCGAGGATAGCCGTCGGCAATATTATCGC CGGTAGAACGTGCTATCCAG
Product: eIF-2B alpha/beta/delta family protein
Products: NA
Alternate protein names: M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase [H]
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MQTLNTLDLQTTSLKIVNGQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIGLSASLLLALLAERGLSQALL EQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELCERIAQHGAALVKPGSNLLTHCNTGGLAT AGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGD VANKIGTYSLAVLAHYHRIPFYVAAPHTTHDPDCPDGAAIPIEQRAASEVTGVSGGFGHCQWAPEDAAVYNPAFDVTPAA LISGWVLDSGVITPEQVAAGFFQPHR
Sequences:
>Translated_346_residues MQTLNTLDLQTTSLKIVNGQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIGLSASLLLALLAERGLSQALL EQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELCERIAQHGAALVKPGSNLLTHCNTGGLAT AGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGD VANKIGTYSLAVLAHYHRIPFYVAAPHTTHDPDCPDGAAIPIEQRAASEVTGVSGGFGHCQWAPEDAAVYNPAFDVTPAA LISGWVLDSGVITPEQVAAGFFQPHR >Mature_346_residues MQTLNTLDLQTTSLKIVNGQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIGLSASLLLALLAERGLSQALL EQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAEALRLVDEDRELCERIAQHGAALVKPGSNLLTHCNTGGLAT AGIGTAIGVLLRAHQQGNLRQVWVDETRPLLQGGRLTAWELGELGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGD VANKIGTYSLAVLAHYHRIPFYVAAPHTTHDPDCPDGAAIPIEQRAASEVTGVSGGFGHCQWAPEDAAVYNPAFDVTPAA LISGWVLDSGVITPEQVAAGFFQPHR
Specific function: Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P) [H]
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=354, Percent_Identity=39.5480225988701, Blast_Score=213, Evalue=3e-55, Organism=Homo sapiens, GI23943880, Length=333, Percent_Identity=37.2372372372372, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17557462, Length=341, Percent_Identity=39.5894428152493, Blast_Score=202, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17557123, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6325375, Length=396, Percent_Identity=33.5858585858586, Blast_Score=167, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322878, Length=207, Percent_Identity=30.4347826086957, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI21357667, Length=355, Percent_Identity=39.1549295774648, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24651647, Length=355, Percent_Identity=39.1549295774648, Blast_Score=206, Evalue=2e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 [H]
Pfam domain/function: PF01008 IF-2B [H]
EC number: =5.3.1.23 [H]
Molecular weight: Translated: 37115; Mature: 37115
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLNTLDLQTTSLKIVNGQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG CCCCCCCCEEEEEEEEECCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALRLVDEDRELCERIAQHGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLR HHHHHHHHHHHHHHHHHCCCEEECCCCHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCE QVWVDETRPLLQGGRLTAWELGELGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGD EEECCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCC VANKIGTYSLAVLAHYHRIPFYVAAPHTTHDPDCPDGAAIPIEQRAASEVTGVSGGFGHC HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC QWAPEDAAVYNPAFDVTPAALISGWVLDSGVITPEQVAAGFFQPHR CCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MQTLNTLDLQTTSLKIVNGQLWILDQQALPQRQEWLLADTVASLIEHIQALRVRGAPLIG CCCCCCCCEEEEEEEEECCEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC LSASLLLALLAERGLSQALLEQALIALRESRPTAVNLMNNLARMQQALLQPNWVTAMAAE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH ALRLVDEDRELCERIAQHGAALVKPGSNLLTHCNTGGLATAGIGTAIGVLLRAHQQGNLR HHHHHHHHHHHHHHHHHCCCEEECCCCHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCE QVWVDETRPLLQGGRLTAWELGELGIPYQLICDSMAASLMAQGQVDAIWVGADRIAANGD EEECCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCEECCCC VANKIGTYSLAVLAHYHRIPFYVAAPHTTHDPDCPDGAAIPIEQRAASEVTGVSGGFGHC HHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC QWAPEDAAVYNPAFDVTPAALISGWVLDSGVITPEQVAAGFFQPHR CCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA