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The map label for this gene is intQ [C]

Identifier: 153950338

GI number: 153950338

Start: 4554086

End: 4554655

Strand: Reverse

Name: intQ [C]

Synonym: YpsIP31758_4046

Alternate gene names: 153950338

Gene position: 4554655-4554086 (Counterclockwise)

Preceding gene: 153950838

Following gene: 153948225

Centisome position: 96.43

GC content: 43.51

Gene sequence:

>570_bases
TTGGTTGAACTGTATCTGACTCAACGCATTGAAGATCGCAAAGGGAAAGACGGAAAAATTATTAAGGGAGCAAGAAAGTC
TCGGGCGCAATATCCGTGCCGGTGTATGTTAGTCAGCAATGTGGTGGATCAAATTGGTGATCGTGCGGCTCAGGATGTTA
CCCGAAAAGATGTTATTGATCTCGTTATGATGGTTGTTGGGCGCGGGGCTAATGTATTGGCTGGCAACATGCTTCGTGAA
CTTTGTGCTGCTTATGAGTTTGCTCTTGGTCTGGGAAAATTGGATGAGAATTTTGCTAACCCTGCATTATTAGCTAAAGC
CAGCTTGGCTCAAGCCAAAGTGAAACTCACTTCCACACCGGGCAAGCGTGTTCTATCAGAAAGTGAATTGATGCAGATGA
TAAATTGGTTGCCTAATTCGCCTTATCCTATAAATGTTAAAAATGTTTTACGACTAACATTGTGGACTGGATGCCGTACA
GGTGAAGTTTGCAGTATCGCATGGCAAGACATTAATCTGGATACTGGCACTATTCACTTGCGTGAAACAAAGAGTGAAAG
CGAACGGTAA

Upstream 100 bases:

>100_bases
GAATGAAGGTCGCTGTCCTACAACTGAACGCAAAGTTGCAAAACAACAAAAGCAACAAGCGGAGTTAGCTGAGAAGAAGA
CTGTTTTCACCCTCAAAGAT

Downstream 100 bases:

>100_bases
TCCCCCCTAAAAACTGGGGTACTCATAAGTAGAATTTTCTCGTAACATTAATTGAGGAGATTCAAATGAAAAAATCACGT
TTTAGCGACAGTCAGATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MVELYLTQRIEDRKGKDGKIIKGARKSRAQYPCRCMLVSNVVDQIGDRAAQDVTRKDVIDLVMMVVGRGANVLAGNMLRE
LCAAYEFALGLGKLDENFANPALLAKASLAQAKVKLTSTPGKRVLSESELMQMINWLPNSPYPINVKNVLRLTLWTGCRT
GEVCSIAWQDINLDTGTIHLRETKSESER

Sequences:

>Translated_189_residues
MVELYLTQRIEDRKGKDGKIIKGARKSRAQYPCRCMLVSNVVDQIGDRAAQDVTRKDVIDLVMMVVGRGANVLAGNMLRE
LCAAYEFALGLGKLDENFANPALLAKASLAQAKVKLTSTPGKRVLSESELMQMINWLPNSPYPINVKNVLRLTLWTGCRT
GEVCSIAWQDINLDTGTIHLRETKSESER
>Mature_189_residues
MVELYLTQRIEDRKGKDGKIIKGARKSRAQYPCRCMLVSNVVDQIGDRAAQDVTRKDVIDLVMMVVGRGANVLAGNMLRE
LCAAYEFALGLGKLDENFANPALLAKASLAQAKVKLTSTPGKRVLSESELMQMINWLPNSPYPINVKNVLRLTLWTGCRT
GEVCSIAWQDINLDTGTIHLRETKSESER

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome (By Similarity). [C]

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21009; Mature: 21009

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELYLTQRIEDRKGKDGKIIKGARKSRAQYPCRCMLVSNVVDQIGDRAAQDVTRKDVID
CEEEEEEHHHHHCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMMVVGRGANVLAGNMLRELCAAYEFALGLGKLDENFANPALLAKASLAQAKVKLTSTP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHEEEEECCC
GKRVLSESELMQMINWLPNSPYPINVKNVLRLTLWTGCRTGEVCSIAWQDINLDTGTIHL
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEE
RETKSESER
EECCCCCCC
>Mature Secondary Structure
MVELYLTQRIEDRKGKDGKIIKGARKSRAQYPCRCMLVSNVVDQIGDRAAQDVTRKDVID
CEEEEEEHHHHHCCCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVMMVVGRGANVLAGNMLRELCAAYEFALGLGKLDENFANPALLAKASLAQAKVKLTSTP
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHEEEEECCC
GKRVLSESELMQMINWLPNSPYPINVKNVLRLTLWTGCRTGEVCSIAWQDINLDTGTIHL
CHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEE
RETKSESER
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA