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The map label for this gene is 153948225

Identifier: 153948225

GI number: 153948225

Start: 4553463

End: 4553798

Strand: Reverse

Name: 153948225

Synonym: YpsIP31758_4044

Alternate gene names: NA

Gene position: 4553798-4553463 (Counterclockwise)

Preceding gene: 153950338

Following gene: 153948059

Centisome position: 96.41

GC content: 41.67

Gene sequence:

>336_bases
GTGGTAAAGCCGTCTCAACGGCGCGAGATGGCACAACACATGGTTGTCACTAAGAATATCAGTATCAGCCTTCAGTTTCA
GGAATGGGCGATAAAGCATCAAATAACGTTACTTTATATTCAGACGGGTAAGCCACAGCAGAATGCCTATATAGAGCGAT
TTAATCGTATAGTTTGTTATGACTGGTTAAACCAATATGCATTTAGTTATATTGACGAGGTACGGAATTTTGCCACTTGC
TGGTTGTGGAGCTATAACCATGAACGTCCACACATGGGGCTGGGTGGTATAACACCGATGCAAAAACTGGCATTGAGCAC
AAATATTCTACTATAA

Upstream 100 bases:

>100_bases
GCGCGCCTCAAAGAATTGGAAGACGAAAACCGTCGGTTGAAAAAAATGTATGCTGAGGAACGCTTAAAATCTGAAATTAT
TCAGGAAGCCATGCAAAAAA

Downstream 100 bases:

>100_bases
ACTCCTGTCGAAAATGGGATGATTACCCTGGGTTTCTGTGAAACACACTTCATTCTTGTTTGCAGGAAAAGTCTGAATAT
CTTATAAATGAAATGACTCT

Product: IS3 family transposase orfB

Products: NA

Alternate protein names: Transposase; Integrase Catalytic Subunit; ISxcd1 Transposase; Transposase OrfB; Transposase OrfB For Insertion Sequence Element; ISxac2 Transposase; LOW QUALITY PROTEIN Transposase; Fragmented Integrase; Transposase Fragment; Transposase Orf B; Integrase Core Domain Protein; ISMca4 Transposase OrfAB; Integrase Core Subunit; IS3 Family Element Transposase OrfB; ISxac4 Transposase; Transposase Subfamily; IS3 Family Transposase; IS3 Family Transposase OrfB

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MVKPSQRREMAQHMVVTKNISISLQFQEWAIKHQITLLYIQTGKPQQNAYIERFNRIVCYDWLNQYAFSYIDEVRNFATC
WLWSYNHERPHMGLGGITPMQKLALSTNILL

Sequences:

>Translated_111_residues
MVKPSQRREMAQHMVVTKNISISLQFQEWAIKHQITLLYIQTGKPQQNAYIERFNRIVCYDWLNQYAFSYIDEVRNFATC
WLWSYNHERPHMGLGGITPMQKLALSTNILL
>Mature_111_residues
MVKPSQRREMAQHMVVTKNISISLQFQEWAIKHQITLLYIQTGKPQQNAYIERFNRIVCYDWLNQYAFSYIDEVRNFATC
WLWSYNHERPHMGLGGITPMQKLALSTNILL

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13207; Mature: 13207

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPSQRREMAQHMVVTKNISISLQFQEWAIKHQITLLYIQTGKPQQNAYIERFNRIVCY
CCCCHHHHHHHHHHHEECCCEEEEEEHHEHHEEEEEEEEEECCCCCCHHHHHHHCEEHHH
DWLNQYAFSYIDEVRNFATCWLWSYNHERPHMGLGGITPMQKLALSTNILL
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MVKPSQRREMAQHMVVTKNISISLQFQEWAIKHQITLLYIQTGKPQQNAYIERFNRIVCY
CCCCHHHHHHHHHHHEECCCEEEEEEHHEHHEEEEEEEEEECCCCCCHHHHHHHCEEHHH
DWLNQYAFSYIDEVRNFATCWLWSYNHERPHMGLGGITPMQKLALSTNILL
HHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA