| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yeiH [C]
Identifier: 153949961
GI number: 153949961
Start: 3027624
End: 3028712
Strand: Direct
Name: yeiH [C]
Synonym: YpsIP31758_2674
Alternate gene names: 153949961
Gene position: 3027624-3028712 (Clockwise)
Preceding gene: 153948486
Following gene: 153949100
Centisome position: 64.1
GC content: 50.87
Gene sequence:
>1089_bases ATGGCGACTTCTCAGACAAAAGAACTCCCCCGCCCTCAGCTGTTTACTGTGATGACCCGCTATATTCCGGGTTTGGTGTT AACGGGTGTGATTACGGGTTTAGCCCTTAATGTGGGCGATATGCCGTGGTTTATCAATATGGGGCTGGGGGCGCTGACCC TGGCTATTCTCTTCGGCATTATCGTGGGAAATACGCTGTACCCATGGCTACAGCCGGTCTGTTCAGATGGTGTGGTCTAT GCCAAACAGTATTTACTGCGGCTAGGGATCATTTTGTACGGTTTCCGCCTGACCTTTCAGCAAGTGGCTGATGTCGGGGC GACCGGTATGGTGATCGATTTATTGACCCTAAGTTCCACCTTTATATTGGCATGTTGGTTGGGCAAGCGGGTATTTGGTC TGGATCAGCAAACAGTGATGTTGATCGGGGCCGGTAGTAGCATCTGTGGTGCCGCCGCCATTATGGCGACTGAACCCGTA TTGAAAGCGGATGCCAGTAAAGTGGCGGTTGCTGTTGCCACCGTGGTCATTTTCGGTACGCTGGCTATTTTTGTTTACCC TTGGTTGTATCAGCTAAACCTGCATTATCAATGGTTGCCTTTCAGCCAGGAGACATTTGGTATTTTTGCCGGTTCGACCA TTCATGAAGTGGCTCAGGTCGTCGCTGCCGGACATGCCATTGGCCCTGATGCTGAAAATGCGGCGGTGATCACCAAGATG ATCCGCGTGATGATGCTGGCACCGTTCCTGCTGCTACTTTCCGCCTATCTGGGCCGTAGCCGCATAAAAACAAGCGGTGA AAAACGCGAGAAAAGCGCTATCACCATCCCGTGGTTTGCGGTGATCTTCATTCTGATGGCGGGTTTTAACTCACTGAATC TGTTGCCTGCGGTCTGGGTTAATCATCTGATTACGCTGGATACCATTCTGTTGGCCATGGCAATGGCAGCGCTGGGATTA ACCACGCACATTGGTTCCATCCGTCAAGCCGGGGTGAAACCACTGTTACTGGCCCTATTGCTGTTCATCTGGTTATTGGT CGGTGGCACCGGTATCAACTTATTTGTGCAACATATTGCACTTGTATAA
Upstream 100 bases:
>100_bases CATTACCACTTATATCGATAAGATATAAATATATAATGAATTTATCTATTAAGACAATATCGTTAAACTATGCCCATATT CATTGCAAACAGGAGGTCAC
Downstream 100 bases:
>100_bases ATCATCTCACTTGTGTGAAGCATCTTACTGGTGCAAAAACCTCACAGGCTAAAACAAACCGTTTAAGGGCCGTATCCGCG GCCCTTATTTCCCTTCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MATSQTKELPRPQLFTVMTRYIPGLVLTGVITGLALNVGDMPWFINMGLGALTLAILFGIIVGNTLYPWLQPVCSDGVVY AKQYLLRLGIILYGFRLTFQQVADVGATGMVIDLLTLSSTFILACWLGKRVFGLDQQTVMLIGAGSSICGAAAIMATEPV LKADASKVAVAVATVVIFGTLAIFVYPWLYQLNLHYQWLPFSQETFGIFAGSTIHEVAQVVAAGHAIGPDAENAAVITKM IRVMMLAPFLLLLSAYLGRSRIKTSGEKREKSAITIPWFAVIFILMAGFNSLNLLPAVWVNHLITLDTILLAMAMAALGL TTHIGSIRQAGVKPLLLALLLFIWLLVGGTGINLFVQHIALV
Sequences:
>Translated_362_residues MATSQTKELPRPQLFTVMTRYIPGLVLTGVITGLALNVGDMPWFINMGLGALTLAILFGIIVGNTLYPWLQPVCSDGVVY AKQYLLRLGIILYGFRLTFQQVADVGATGMVIDLLTLSSTFILACWLGKRVFGLDQQTVMLIGAGSSICGAAAIMATEPV LKADASKVAVAVATVVIFGTLAIFVYPWLYQLNLHYQWLPFSQETFGIFAGSTIHEVAQVVAAGHAIGPDAENAAVITKM IRVMMLAPFLLLLSAYLGRSRIKTSGEKREKSAITIPWFAVIFILMAGFNSLNLLPAVWVNHLITLDTILLAMAMAALGL TTHIGSIRQAGVKPLLLALLLFIWLLVGGTGINLFVQHIALV >Mature_361_residues ATSQTKELPRPQLFTVMTRYIPGLVLTGVITGLALNVGDMPWFINMGLGALTLAILFGIIVGNTLYPWLQPVCSDGVVYA KQYLLRLGIILYGFRLTFQQVADVGATGMVIDLLTLSSTFILACWLGKRVFGLDQQTVMLIGAGSSICGAAAIMATEPVL KADASKVAVAVATVVIFGTLAIFVYPWLYQLNLHYQWLPFSQETFGIFAGSTIHEVAQVVAAGHAIGPDAENAAVITKMI RVMMLAPFLLLLSAYLGRSRIKTSGEKREKSAITIPWFAVIFILMAGFNSLNLLPAVWVNHLITLDTILLAMAMAALGLT THIGSIRQAGVKPLLLALLLFIWLLVGGTGINLFVQHIALV
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family
Homologues:
Organism=Escherichia coli, GI1788482, Length=340, Percent_Identity=65.8823529411765, Blast_Score=419, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1307_YERPE (Q8ZGJ0)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AF0159 - RefSeq: NP_670178.1 - RefSeq: NP_992651.1 - RefSeq: YP_002346332.1 - ProteinModelPortal: Q8ZGJ0 - GeneID: 1147825 - GeneID: 1174149 - GeneID: 2766330 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO1307 - KEGG: ypk:y2878 - KEGG: ypm:YP_1285 - HOGENOM: HBG669767 - OMA: HYHISAL - ProtClustDB: CLSK888806 - BioCyc: YPES187410:Y2878-MONOMER - BioCyc: YPES214092:YPO1307-MONOMER - InterPro: IPR004630 - InterPro: IPR018383 - TIGRFAMs: TIGR00698
Pfam domain/function: PF03601 Cons_hypoth698
EC number: NA
Molecular weight: Translated: 39046; Mature: 38915
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x2169dbd0)-; HASH(0x216222d0)-; HASH(0x21ba5098)-; HASH(0x209f3ddc)-; HASH(0x2179a8c4)-; HASH(0x1f53ddf4)-; HASH(0x2192491c)-; HASH(0x2148797c)-; HASH(0x20af3bd4)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSQTKELPRPQLFTVMTRYIPGLVLTGVITGLALNVGDMPWFINMGLGALTLAILFGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHH IVGNTLYPWLQPVCSDGVVYAKQYLLRLGIILYGFRLTFQQVADVGATGMVIDLLTLSST HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FILACWLGKRVFGLDQQTVMLIGAGSSICGAAAIMATEPVLKADASKVAVAVATVVIFGT HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH LAIFVYPWLYQLNLHYQWLPFSQETFGIFAGSTIHEVAQVVAAGHAIGPDAENAAVITKM HHHHHHHHHHHEECEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH IRVMMLAPFLLLLSAYLGRSRIKTSGEKREKSAITIPWFAVIFILMAGFNSLNLLPAVWV HHHHHHHHHHHHHHHHHCHHHHHCCCCHHHCCCEEHHHHHHHHHHHHCCCCCCHHHHHHH NHLITLDTILLAMAMAALGLTTHIGSIRQAGVKPLLLALLLFIWLLVGGTGINLFVQHIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LV CH >Mature Secondary Structure ATSQTKELPRPQLFTVMTRYIPGLVLTGVITGLALNVGDMPWFINMGLGALTLAILFGI CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHH IVGNTLYPWLQPVCSDGVVYAKQYLLRLGIILYGFRLTFQQVADVGATGMVIDLLTLSST HHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH FILACWLGKRVFGLDQQTVMLIGAGSSICGAAAIMATEPVLKADASKVAVAVATVVIFGT HHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH LAIFVYPWLYQLNLHYQWLPFSQETFGIFAGSTIHEVAQVVAAGHAIGPDAENAAVITKM HHHHHHHHHHHEECEEEECCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH IRVMMLAPFLLLLSAYLGRSRIKTSGEKREKSAITIPWFAVIFILMAGFNSLNLLPAVWV HHHHHHHHHHHHHHHHHCHHHHHCCCCHHHCCCEEHHHHHHHHHHHHCCCCCCHHHHHHH NHLITLDTILLAMAMAALGLTTHIGSIRQAGVKPLLLALLLFIWLLVGGTGINLFVQHIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHH LV CH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430