Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

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The map label for this gene is 153946983

Identifier: 153946983

GI number: 153946983

Start: 3304940

End: 3306721

Strand: Reverse

Name: 153946983

Synonym: YpsIP31758_2930

Alternate gene names: NA

Gene position: 3306721-3304940 (Counterclockwise)

Preceding gene: 153949901

Following gene: 153948180

Centisome position: 70.01

GC content: 47.08

Gene sequence:

>1782_bases
TTGGATAACAGATTTTTTAAAGTGCCGTTCGCGTCAAACGGTGACACGCAAACAATTCAAGACGAAACAGATAACGAGGG
GTTTGTTAGTTTTAATGAGGGCTGGGGCGGGGACTACGAGCGTGACTTGAGGACAGACACCCGAGCCAAGCCGGTTGGCC
GCAAAGAAATGAATTACGTATTAAATGCGATAACACGAAATATTCGGCAGTATCAAACTACGGGTTTTCCTGAATTTATT
ACAGCAGCAGATAATAACGGGGCGGCGTTCGCGTACGATACCGGCGTTGTTGTCATGCACAACAATGCTCTCTATTTGTC
ACTTGTTTCAAATAATACCAGCGTCCCCGGCACTGATGAAAGCACATGGCAGGTGTATATTCAGCGCGAATCAACAGAAG
GAGAAACCCTCGCGGGGGTGAGTGCGATTAGTGCGATCACGCCGCGACGATTAAAATTAAAAACGGATATCATTGAAAAT
AGTATTACTGATATTAGCAGTTCATTAAGCCGCGTCGGTAATCTGCAAGTTGCACAAGTCTATTTAGAGTCGTCGGGGGT
TGTCACTTTAACTGTTCCGACTGACTGTGTGCAAATATTGCTCATTGGTCGCTACGTTACTGACGGCGTAGAAAGCCGGG
ATCGCTGGGATAGTACTATCTATGCGAATGGAGAGCTTGTTGATACGACGTCATTCTACGGGTTTGTGACTGGCGGCAGT
GGCCACGGACACCACCGGCGGGAATTTCTACCTTTTAGTAAATTAATTGATATGCAAGTACTGGCAGGAGACCCAATTAA
TTTTCAATACACAAGCAATCGCAACAGTAATACAACATTCACAGTTTTCTACATTCAGGGCGTGAGTACTGAAGAGCCTG
ATCAGCCATCAACTATCATCATTTCGCCGCTTAACAGCGTAATCAATGCAGGGACTAGCCAGCAACTGATCGCGATGGTC
CTGCCATCAAGTGCCGCAGCTGAATACCCTGTCACGTGGCAAGTATCCGACCCGGCGCTGGGAACTATTGACAGCAACGG
CAGGTATTCCGCAAATGTTGGCGCTAGCGGCACACAAAGCGTTATAGCTAGCGTTTCCACGGGACTGGCGTCCACAGCGA
TAATAACGCAACACATTTTTCTGGCCGGAATTGAAATTGGTGATGCTCCTGCAGACTTAGTTGCCGGGAATACTTACACC
GTACCTGTTACGTATACACCGTCAAATTACACCGAGGCGATACTCACATCATCATCAGACTCAACGAGTGCGACATTATC
AGCCCTCGGAACGCTATCAATCAGTAACGCAGGCTCGACAACGTTATCGTTGGCTGGCGCAAATTCTGGTATCACAAAGT
CAATAACGATTGTTGCTGTAGATAAAGAAACGCCGGATGTGTTTCTTAAAATTGAAAATAACTTATCTGATGTGTCGAGC
ATATCCGAGGCCCGAGAAAATCTTGAACTGGGCGAGCTGGCAACCAAGGATTCGCTAACCGCCGGCGATGTAGGAGCTGT
TCATATTGCTGATGTAGCGATAGTTGCAGAGTTGGATTTAAACAGCATGACGGGGCCGGGGGAGTACTTTCAAAACATAT
CGAGCAACGCCCTACTGAGTTTAAATTATCCGATCAACGTTGCAGGGGCGTTAAAGGTTTACAGGACAGGTGTTGATGAA
GTCGGATGCAGACAAGTGTACATGCCCTATAACTCAACATCAGAGTATCGACGCTACGCGTACGGGGATCCGCTAGTGTT
CTCTGCATGGATTGAGAAATAA

Upstream 100 bases:

>100_bases
GACATATCAAAAAAGAGGGGGAAACTTTTCGCATCAAAGTATTTATACAATCAAATAATTTCAGTGTACGGCAATGAAAC
TCCGGAAAAGGAAATAAAAA

Downstream 100 bases:

>100_bases
AAAACCGGGCTTAACTGCCCGGCCTATTCATTCATATTGGGTTTGATGTTTTGGTGATAACGCGGGAATACGGGGGGGGA
TCGCGGTGATTTTTGAGGTC

Product: Ig-like domain-containing protein

Products: NA

Alternate protein names: Ig-Like Domain-Containing Protein; Phage Protein; Phage Tail Protein

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MDNRFFKVPFASNGDTQTIQDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYVLNAITRNIRQYQTTGFPEFI
TAADNNGAAFAYDTGVVVMHNNALYLSLVSNNTSVPGTDESTWQVYIQRESTEGETLAGVSAISAITPRRLKLKTDIIEN
SITDISSSLSRVGNLQVAQVYLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS
GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTIIISPLNSVINAGTSQQLIAMV
LPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQSVIASVSTGLASTAIITQHIFLAGIEIGDAPADLVAGNTYT
VPVTYTPSNYTEAILTSSSDSTSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS
ISEARENLELGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLSLNYPINVAGALKVYRTGVDE
VGCRQVYMPYNSTSEYRRYAYGDPLVFSAWIEK

Sequences:

>Translated_593_residues
MDNRFFKVPFASNGDTQTIQDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYVLNAITRNIRQYQTTGFPEFI
TAADNNGAAFAYDTGVVVMHNNALYLSLVSNNTSVPGTDESTWQVYIQRESTEGETLAGVSAISAITPRRLKLKTDIIEN
SITDISSSLSRVGNLQVAQVYLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS
GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTIIISPLNSVINAGTSQQLIAMV
LPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQSVIASVSTGLASTAIITQHIFLAGIEIGDAPADLVAGNTYT
VPVTYTPSNYTEAILTSSSDSTSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS
ISEARENLELGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLSLNYPINVAGALKVYRTGVDE
VGCRQVYMPYNSTSEYRRYAYGDPLVFSAWIEK
>Mature_593_residues
MDNRFFKVPFASNGDTQTIQDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYVLNAITRNIRQYQTTGFPEFI
TAADNNGAAFAYDTGVVVMHNNALYLSLVSNNTSVPGTDESTWQVYIQRESTEGETLAGVSAISAITPRRLKLKTDIIEN
SITDISSSLSRVGNLQVAQVYLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS
GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTIIISPLNSVINAGTSQQLIAMV
LPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQSVIASVSTGLASTAIITQHIFLAGIEIGDAPADLVAGNTYT
VPVTYTPSNYTEAILTSSSDSTSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS
ISEARENLELGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLSLNYPINVAGALKVYRTGVDE
VGCRQVYMPYNSTSEYRRYAYGDPLVFSAWIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63673; Mature: 63673

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRFFKVPFASNGDTQTIQDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYV
CCCCEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHH
LNAITRNIRQYQTTGFPEFITAADNNGAAFAYDTGVVVMHNNALYLSLVSNNTSVPGTDE
HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEECCEEEEEEECCCCCCCCCCC
STWQVYIQRESTEGETLAGVSAISAITPRRLKLKTDIIENSITDISSSLSRVGNLQVAQV
CEEEEEEEECCCCCCEEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEE
YLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS
EEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCEEEEEEECCC
GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTII
CCCCCHHHCCCHHHHHCEEEECCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEE
ISPLNSVINAGTSQQLIAMVLPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQS
EECHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCCCHHH
VIASVSTGLASTAIITQHIFLAGIEIGDAPADLVAGNTYTVPVTYTPSNYTEAILTSSSD
HHHHHHCCHHHHHHHHHEEEEEEEEECCCCHHHCCCCEEEEEEEECCCCCEEEEEECCCC
STSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS
CCHHEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCHHHHHH
ISEARENLELGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLS
HHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHCCCCCEEEE
LNYPINVAGALKVYRTGVDEVGCRQVYMPYNSTSEYRRYAYGDPLVFSAWIEK
ECCCEEEHHEEEEECCCCCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEECCC
>Mature Secondary Structure
MDNRFFKVPFASNGDTQTIQDETDNEGFVSFNEGWGGDYERDLRTDTRAKPVGRKEMNYV
CCCCEEEEEECCCCCCCEECCCCCCCCEEEECCCCCCCCCHHCCCCCCCCCCCHHHHHHH
LNAITRNIRQYQTTGFPEFITAADNNGAAFAYDTGVVVMHNNALYLSLVSNNTSVPGTDE
HHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCEEEEECCEEEEEEECCCCCCCCCCC
STWQVYIQRESTEGETLAGVSAISAITPRRLKLKTDIIENSITDISSSLSRVGNLQVAQV
CEEEEEEEECCCCCCEEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCEEEEEE
YLESSGVVTLTVPTDCVQILLIGRYVTDGVESRDRWDSTIYANGELVDTTSFYGFVTGGS
EEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEECCEEEEEEECCC
GHGHHRREFLPFSKLIDMQVLAGDPINFQYTSNRNSNTTFTVFYIQGVSTEEPDQPSTII
CCCCCHHHCCCHHHHHCEEEECCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCEEE
ISPLNSVINAGTSQQLIAMVLPSSAAAEYPVTWQVSDPALGTIDSNGRYSANVGASGTQS
EECHHHHHCCCCCCEEEEEEECCCCCCCCCEEEEECCCCEEEECCCCCEEECCCCCCHHH
VIASVSTGLASTAIITQHIFLAGIEIGDAPADLVAGNTYTVPVTYTPSNYTEAILTSSSD
HHHHHHCCHHHHHHHHHEEEEEEEEECCCCHHHCCCCEEEEEEEECCCCCEEEEEECCCC
STSATLSALGTLSISNAGSTTLSLAGANSGITKSITIVAVDKETPDVFLKIENNLSDVSS
CCHHEEEEEEEEEECCCCCEEEEEECCCCCCEEEEEEEEEECCCCEEEEEECCCHHHHHH
ISEARENLELGELATKDSLTAGDVGAVHIADVAIVAELDLNSMTGPGEYFQNISSNALLS
HHHHHHCCCHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCHHHHHCCCCCEEEE
LNYPINVAGALKVYRTGVDEVGCRQVYMPYNSTSEYRRYAYGDPLVFSAWIEK
ECCCEEEHHEEEEECCCCCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA