| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is artJ [H]
Identifier: 153949883
GI number: 153949883
Start: 2993286
End: 2994017
Strand: Direct
Name: artJ [H]
Synonym: YpsIP31758_2639
Alternate gene names: 153949883
Gene position: 2993286-2994017 (Clockwise)
Preceding gene: 153949781
Following gene: 153947544
Centisome position: 63.37
GC content: 44.67
Gene sequence:
>732_bases ATGAAAAAATTACTATTGGCAACGTTATTAAGTGGCATGGCTTTCAGCGCTACCGCCGCAGAGACCCTCCGTTTTGCAGC CTCAGCCACCTACCCGCCATTTGAATCTATGGATGCCAATAACGAAATCGTTGGCTTTGATATGGATCTGGCAAAAGCAC TGTGTAAACAAATGGAAGCCAACTGTACTTTCACTAATCAGGCTTTTGATAGCCTGATCCCAGCGCTTAAATTCAAACGT TATGATGCCGTTATCTCTGGTATGGATATCACGCCAGAACGCAGTAAGCAGGTGGCATTCACTCAGCCTTACTACGCTAA CTCCGCGATTGTTATCGCCCCGAAAGGTAAATTCAGCACTTTTGCTGACCTGAAAGGCAAAAAGATTGGGATGGAGAATG GCACTACCCATCAGAAATATTTACAGGATAAACATCCTGAAATTCAGACCGTGTCTTATGACAGCTACCAGAATGCCATC ATTGATCTGAAAAATGGCCGTATTGATGGTGTGTTTGGTGATACTGCGGTAGTGAATGAATGGCTGAAAACCAATCCTAA TTTAGCCTCTGTCGGCGAGCATGTGACCGACCCACAATATTTCGGCACCGGTTTAGGTATTGCTGTGCGCCCGGATAACA TCGCCCTACTGACAAAATTGAATAAAGCCATTGATGCGGTGAAAGCTGATGGTACTTATCAAGCGATCAATGATAAGTGG TTCCCTCAATAA
Upstream 100 bases:
>100_bases CCATCAGACAGGGGCTTTTTTGGCAAAAAAACAAACCAGATACAATAAAATCAATAACTAATAACATATTCTATTGAAAA ATTCAGACAGGAGCTTAAGC
Downstream 100 bases:
>100_bases TCCCCTTCATATTTGACGTTGCAGGGGGATGCGCTTGTTAGCTGCCGACCTGCAACGCCAGTGACTTTAACGTTTTAACG CTTTGACTTTGGCTCACTGC
Product: arginine ABC transporter periplasmic protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKLLLATLLSGMAFSATAAETLRFAASATYPPFESMDANNEIVGFDMDLAKALCKQMEANCTFTNQAFDSLIPALKFKR YDAVISGMDITPERSKQVAFTQPYYANSAIVIAPKGKFSTFADLKGKKIGMENGTTHQKYLQDKHPEIQTVSYDSYQNAI IDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALLTKLNKAIDAVKADGTYQAINDKW FPQ
Sequences:
>Translated_243_residues MKKLLLATLLSGMAFSATAAETLRFAASATYPPFESMDANNEIVGFDMDLAKALCKQMEANCTFTNQAFDSLIPALKFKR YDAVISGMDITPERSKQVAFTQPYYANSAIVIAPKGKFSTFADLKGKKIGMENGTTHQKYLQDKHPEIQTVSYDSYQNAI IDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALLTKLNKAIDAVKADGTYQAINDKW FPQ >Mature_243_residues MKKLLLATLLSGMAFSATAAETLRFAASATYPPFESMDANNEIVGFDMDLAKALCKQMEANCTFTNQAFDSLIPALKFKR YDAVISGMDITPERSKQVAFTQPYYANSAIVIAPKGKFSTFADLKGKKIGMENGTTHQKYLQDKHPEIQTVSYDSYQNAI IDLKNGRIDGVFGDTAVVNEWLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALLTKLNKAIDAVKADGTYQAINDKW FPQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=78.6008230452675, Blast_Score=411, Evalue=1e-116, Organism=Escherichia coli, GI1787088, Length=241, Percent_Identity=68.0497925311203, Blast_Score=361, Evalue=1e-101, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=36.7588932806324, Blast_Score=167, Evalue=4e-43, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=38.8646288209607, Blast_Score=160, Evalue=8e-41, Organism=Escherichia coli, GI1788228, Length=252, Percent_Identity=30.952380952381, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=30.7377049180328, Blast_Score=102, Evalue=2e-23,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26666; Mature: 26666
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLLATLLSGMAFSATAAETLRFAASATYPPFESMDANNEIVGFDMDLAKALCKQMEA CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHC NCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVAFTQPYYANSAIVIAPKGKFST CCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCCEEEEECCCCCCH FADLKGKKIGMENGTTHQKYLQDKHPEIQTVSYDSYQNAIIDLKNGRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH WLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALLTKLNKAIDAVKADGTYQAINDKW HHHCCCCHHHHCCCCCCCHHHCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEECCCCC FPQ CCC >Mature Secondary Structure MKKLLLATLLSGMAFSATAAETLRFAASATYPPFESMDANNEIVGFDMDLAKALCKQMEA CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHC NCTFTNQAFDSLIPALKFKRYDAVISGMDITPERSKQVAFTQPYYANSAIVIAPKGKFST CCEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCEECCCEEEEECCCCCCH FADLKGKKIGMENGTTHQKYLQDKHPEIQTVSYDSYQNAIIDLKNGRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCEECCHHHHHH WLKTNPNLASVGEHVTDPQYFGTGLGIAVRPDNIALLTKLNKAIDAVKADGTYQAINDKW HHHCCCCHHHHCCCCCCCHHHCCCCEEEECCCCEEEHHHHHHHHHHHCCCCCEEECCCCC FPQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]