| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949766
Identifier: 153949766
GI number: 153949766
Start: 933399
End: 934952
Strand: Direct
Name: 153949766
Synonym: YpsIP31758_0778
Alternate gene names: NA
Gene position: 933399-934952 (Clockwise)
Preceding gene: 153947945
Following gene: 153949312
Centisome position: 19.76
GC content: 51.8
Gene sequence:
>1554_bases ATGCTGATGTCTGTACAGGAAAACAGTGCGCAGGGTAGTGCGACGACCGTGCTAGAGAAGAACCCTGCCGTAGCTCAAGG GGTTTATGCCTCTTTATTTGAAAAGATCAACCTGAATCCCGTCTCCTCATTGGCTGGCCTTGACGCTTTCCAGAACAGTG ATGCACTGGCGGAAGCGACTACGGATGAGCGCGTTACCGCCGCCGTCAGTGTCTTTTTAGACCTGCTGAAGCAATCGTCA AAAAAAGTGGAGAAGCTGGATAAAACCTTGCTGGATGGTCACATTGCGGCACTGGATGACCAAATCAGTCGCCAGTTGGA TGCGGTGATGCATCACGCTGATTTTCAACGTGTCGAGTCCACGTGGCGTGGTGTAAAATCCCTTATTGATCAAACCGACT TCCGTCAAAATGTCCGTATTGAACTGCTGGATATCAGCAAGGATCATCTGGTACAGGATTTTGAAGACGCCCCTGAAATC GTGCAAAGCGGTCTCTACACCCAGACCTACATTCAGGAATACGATACTCCCGGTGGCGAGCCAATTGCCGCGGCTATCTC CAACTACGAGTTTGACCGCAGCCCGCAAGATATCGCCTTGTTGCGCAATATCTCCAAGGTGGCGGCGGCGGCTCACATGC CATTTATCGGTTCTGTTGGTCCTGAGTTCTTTGGCAAAGAGAACATGGAAGAAGTGGCGGCCATCAAAGATATCGCTAAC TACTTTGACCGTGCCGAATACATCAAGTGGAAAGCTTTCCGCGACTCGGATGATTCCCGCTATATCGGCTTGACCATGCC GCGCGTGCTGGGGCGTTTGCCGTACGGGCCAGACACTGTGCCAGTGCGTAGCTTCAACTACGTTGAGCAGGTGAAAGGGC CAGACCATGATCGCTATTTGTGGACCAATGCCTCGTTTGCCTTTGCTGCCAACATGGTGAAAAGCTTCATTAAAAATGGC TGGTGCGTACAGATCCGTGGGCCACAAGCCGGTGGTGCAGTGACCAATCTGCCAATCCACCTGTATGACTTGGGTACCGG TAATCAGGTCAAAATCCCGTCAGAAGTGATGATCCCGGAAACGCGCGAATTTGAGTTTGCCAACCTGGGCTTTATCCCGC TGTCATACTACAAAAACCGTGATTACTCGTGCTTCTTCTCGGCTAACTCCGCCCAGAAACCGGCGCTGTATGATACCGCC GATGCCACCGCCAACAGTCGCATCAATGCCCGTCTGCCGTATATCTTCCTGCTGTCACGCATTGCCCATTACCTGAAGTT GATTCAGCGTGAAAACATTGGCACCACCAAAGATCGTCGTTTGCTGGAGCTGGAGCTGAATAACTGGATCCGTGGGCTAG TCACTGAAATGACTGATCCGGGTGATGATTTACAGGCATCCCATCCACTGCGTGATGCGAAAGTCACGGTAGAAGATATC GAAGACAACCCCGGCTTCTTCCGCGTCAAGCTGTATGCCGTGCCACATTTCCAGGTGGAAGGCATGGATGTGAATTTGTC ATTGGTTTCCCAGATGCCGAAGGCGAAAGCCTGA
Upstream 100 bases:
>100_bases CATTGAGTGACGAGCTGCGTGCTGAATTGGCGGCATTAGCCCCAAAAGAGTGTTAATCGCCGGATTGGCTACTAATAAAT AGAAAGAAAAGAGAAGGAAC
Downstream 100 bases:
>100_bases TTGTCATCATTTTTCAAACAGCAGCATTGTTGGCTATGCCCATTCACCCCAGTCAATGACCGGGGTGAATGCCCTTGCCG TAATTTGAAATTCATCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MLMSVQENSAQGSATTVLEKNPAVAQGVYASLFEKINLNPVSSLAGLDAFQNSDALAEATTDERVTAAVSVFLDLLKQSS KKVEKLDKTLLDGHIAALDDQISRQLDAVMHHADFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEI VQSGLYTQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEEVAAIKDIAN YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTNASFAFAANMVKSFIKNG WCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTA DATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDDLQASHPLRDAKVTVEDI EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Sequences:
>Translated_517_residues MLMSVQENSAQGSATTVLEKNPAVAQGVYASLFEKINLNPVSSLAGLDAFQNSDALAEATTDERVTAAVSVFLDLLKQSS KKVEKLDKTLLDGHIAALDDQISRQLDAVMHHADFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEI VQSGLYTQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEEVAAIKDIAN YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTNASFAFAANMVKSFIKNG WCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTA DATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDDLQASHPLRDAKVTVEDI EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA >Mature_517_residues MLMSVQENSAQGSATTVLEKNPAVAQGVYASLFEKINLNPVSSLAGLDAFQNSDALAEATTDERVTAAVSVFLDLLKQSS KKVEKLDKTLLDGHIAALDDQISRQLDAVMHHADFQRVESTWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEI VQSGLYTQTYIQEYDTPGGEPIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEEVAAIKDIAN YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYLWTNASFAFAANMVKSFIKNG WCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPETREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTA DATANSRINARLPYIFLLSRIAHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDDLQASHPLRDAKVTVEDI EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57895; Mature: 57895
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMSVQENSAQGSATTVLEKNPAVAQGVYASLFEKINLNPVSSLAGLDAFQNSDALAEAT CEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCC TDERVTAAVSVFLDLLKQSSKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHADFQRVES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIVQSGLYTQTYIQEYDTPGGE HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC PIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEEVAAIKDIAN HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHH YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYL HHHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEE WTNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPE EECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCC TREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSR CCCCCCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH IAHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDDLQASHPLRDAKVTVEDI HHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCCCCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC >Mature Secondary Structure MLMSVQENSAQGSATTVLEKNPAVAQGVYASLFEKINLNPVSSLAGLDAFQNSDALAEAT CEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHCC TDERVTAAVSVFLDLLKQSSKKVEKLDKTLLDGHIAALDDQISRQLDAVMHHADFQRVES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TWRGVKSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIVQSGLYTQTYIQEYDTPGGE HHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCC PIAAAISNYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPEFFGKENMEEVAAIKDIAN HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHH YFDRAEYIKWKAFRDSDDSRYIGLTMPRVLGRLPYGPDTVPVRSFNYVEQVKGPDHDRYL HHHHHHHEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCCCEE WTNASFAFAANMVKSFIKNGWCVQIRGPQAGGAVTNLPIHLYDLGTGNQVKIPSEVMIPE EECCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEECCEEEEECCCCCEEECCCCCCCCC TREFEFANLGFIPLSYYKNRDYSCFFSANSAQKPALYDTADATANSRINARLPYIFLLSR CCCCCCCCCCCEEEHHHCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH IAHYLKLIQRENIGTTKDRRLLELELNNWIRGLVTEMTDPGDDLQASHPLRDAKVTVEDI HHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEC EDNPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA CCCCCEEEEEEEEECCEEEECCEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA