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The map label for this gene is 153947945

Identifier: 153947945

GI number: 153947945

Start: 932854

End: 933354

Strand: Direct

Name: 153947945

Synonym: YpsIP31758_0777

Alternate gene names: NA

Gene position: 932854-933354 (Clockwise)

Preceding gene: 153946885

Following gene: 153949766

Centisome position: 19.75

GC content: 47.9

Gene sequence:

>501_bases
ATGTCCTCTTCAAGCTTCCAAAATGAGATACCTAAAGCACGCATTAATATTAAGCTTGACCTGCATACAGGTGGCGCTCA
AAAGAAAATGGAGTTGCCTTTAAAGTTATTGGTGATGGGTGATTACAGCAACGGCCAGGAACAGCGCCCGCTGTCGGAAC
GTGAAAAACTCAATATCAACAAAAACAATTTTAACAGTGTTCTGGCTGAGTTCCAACCGAGCCTGAAACTCTCAGTCCCT
GACACGCTGGCAGCGGATAACACTGATACTGCTGTCGCTTTGACCTTCCGTGACATGAAAGATTTCGAACCGGAAAACGT
CGCCCGTCAAATCCCGCAACTGCGTGCCTTGCTGGCCATGCGCAACCTGCTACGTGACCTCAAATCCAATCTTTTGGACA
ACGCTACCTTCCGTCGCGAGCTGGAAAATATCCTCAAAGACGAAACATTGAGTGACGAGCTGCGTGCTGAATTGGCGGCA
TTAGCCCCAAAAGAGTGTTAA

Upstream 100 bases:

>100_bases
TCAGTGGGCGGTGAATGTTGTGCAGGGTAATGTAGATTATTTTTATTCATTTTCTCAGTGGTGGATTTCTTAAGTTTCCT
TCCCCTAATAAGGAAAATCG

Downstream 100 bases:

>100_bases
TCGCCGGATTGGCTACTAATAAATAGAAAGAAAAGAGAAGGAACATGCTGATGTCTGTACAGGAAAACAGTGCGCAGGGT
AGTGCGACGACCGTGCTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; T6ss S; Intracellular Growth Locus Subunit A; Type VI Secretion; Conserved Protein; Type VI Secretion System Protein ImpB; Cytoplasmic Protein SciH

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSSSSFQNEIPKARINIKLDLHTGGAQKKMELPLKLLVMGDYSNGQEQRPLSEREKLNINKNNFNSVLAEFQPSLKLSVP
DTLAADNTDTAVALTFRDMKDFEPENVARQIPQLRALLAMRNLLRDLKSNLLDNATFRRELENILKDETLSDELRAELAA
LAPKEC

Sequences:

>Translated_166_residues
MSSSSFQNEIPKARINIKLDLHTGGAQKKMELPLKLLVMGDYSNGQEQRPLSEREKLNINKNNFNSVLAEFQPSLKLSVP
DTLAADNTDTAVALTFRDMKDFEPENVARQIPQLRALLAMRNLLRDLKSNLLDNATFRRELENILKDETLSDELRAELAA
LAPKEC
>Mature_165_residues
SSSSFQNEIPKARINIKLDLHTGGAQKKMELPLKLLVMGDYSNGQEQRPLSEREKLNINKNNFNSVLAEFQPSLKLSVPD
TLAADNTDTAVALTFRDMKDFEPENVARQIPQLRALLAMRNLLRDLKSNLLDNATFRRELENILKDETLSDELRAELAAL
APKEC

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18752; Mature: 18620

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSSFQNEIPKARINIKLDLHTGGAQKKMELPLKLLVMGDYSNGQEQRPLSEREKLNIN
CCCCCHHHCCCCEEEEEEEEEECCCCCCHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCC
KNNFNSVLAEFQPSLKLSVPDTLAADNTDTAVALTFRDMKDFEPENVARQIPQLRALLAM
CCHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
RNLLRDLKSNLLDNATFRRELENILKDETLSDELRAELAALAPKEC
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSSSFQNEIPKARINIKLDLHTGGAQKKMELPLKLLVMGDYSNGQEQRPLSEREKLNIN
CCCCHHHCCCCEEEEEEEEEECCCCCCHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCC
KNNFNSVLAEFQPSLKLSVPDTLAADNTDTAVALTFRDMKDFEPENVARQIPQLRALLAM
CCHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
RNLLRDLKSNLLDNATFRRELENILKDETLSDELRAELAALAPKEC
HHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA