| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153949707
Identifier: 153949707
GI number: 153949707
Start: 284703
End: 285227
Strand: Reverse
Name: 153949707
Synonym: YpsIP31758_0255
Alternate gene names: NA
Gene position: 285227-284703 (Counterclockwise)
Preceding gene: 153948479
Following gene: 153947183
Centisome position: 6.04
GC content: 41.9
Gene sequence:
>525_bases ATGGGTTTTTACATAAAGGACTATCAGGTATTTATGATGAAGAAAACTGTTATTGCTATTATCACTATGGCCACATTGAC CAGCACTGCGGCTTATGCAAACACAATAGAGAAAGATATTCGTGTTGAAGCAGAAATCATTTCTCTCATGGACGTGAAGA GAGCAGATGATAGCAATATTAATAAAATAAAATTAACCTATGACACGGTAGCGAATGATGGTACCTATAGCCATTCAGAA GCAATTAAAGTAAAAGCACGCAAACAACTCGGAGATAAGCTAAAAGTATCTCTTGCCGCACCGGTTATCTTAAGCGAGCC AGATAGCAATAAAGAGTTTACTCACGTTGAAGTATTGTTAGATGGGAAGAAGCTGCTTGAGACGGCCGACACACAAGACC TGATTGCCTTCCATGGCTCTGAGCTCAACGCAGAACTGAAAGTCAGCGCCAAAGAGCCGGAGAAGGCCATCGGTGGTGAA AAGTATAGTGGGGTAATTCAGTTACGCCTGGAACCAAGCGCTTAA
Upstream 100 bases:
>100_bases GTTTGTGACGGGCATAATGTCGTGTAATTATTTAACACCCTCTTTTTATATTACACCACCAACATAAACCCTAATAAATC ACAATGCCATTCCATTTTGG
Downstream 100 bases:
>100_bases TTTAGTTCGTTTCAATACAGTTTGTTAATTTAATGAATACAGCCATGGAATTATTTCCTGGCTGTATATATCCGTCATAC TTCAAGCTGCATGTGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MGFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVANDGTYSHSE AIKVKARKQLGDKLKVSLAAPVILSEPDSNKEFTHVEVLLDGKKLLETADTQDLIAFHGSELNAELKVSAKEPEKAIGGE KYSGVIQLRLEPSA
Sequences:
>Translated_174_residues MGFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVANDGTYSHSE AIKVKARKQLGDKLKVSLAAPVILSEPDSNKEFTHVEVLLDGKKLLETADTQDLIAFHGSELNAELKVSAKEPEKAIGGE KYSGVIQLRLEPSA >Mature_173_residues GFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVANDGTYSHSEA IKVKARKQLGDKLKVSLAAPVILSEPDSNKEFTHVEVLLDGKKLLETADTQDLIAFHGSELNAELKVSAKEPEKAIGGEK YSGVIQLRLEPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19179; Mature: 19048
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNI CCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NKIKLTYDTVANDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPDSNKEFTHVEVLL CEEEEEEEECCCCCCCCCCHHEEEEEHHHCCCEEEEEEECCEEEECCCCCCCEEEEEEEE DGKKLLETADTQDLIAFHGSELNAELKVSAKEPEKAIGGEKYSGVIQLRLEPSA CCHHHHHCCCCCCEEEECCCCCCEEEEEECCCCHHHCCCCCCCCEEEEEECCCC >Mature Secondary Structure GFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVKRADDSNI CEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NKIKLTYDTVANDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPDSNKEFTHVEVLL CEEEEEEEECCCCCCCCCCHHEEEEEHHHCCCEEEEEEECCEEEECCCCCCCEEEEEEEE DGKKLLETADTQDLIAFHGSELNAELKVSAKEPEKAIGGEKYSGVIQLRLEPSA CCHHHHHCCCCCCEEEECCCCCCEEEEEECCCCHHHCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA