| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949646
Identifier: 153949646
GI number: 153949646
Start: 1503663
End: 1504334
Strand: Direct
Name: 153949646
Synonym: YpsIP31758_1283
Alternate gene names: NA
Gene position: 1503663-1504334 (Clockwise)
Preceding gene: 153949932
Following gene: 153948357
Centisome position: 31.83
GC content: 44.2
Gene sequence:
>672_bases ATGATAAAAATGAAAAGTCAAGATATCGGTTTGATGCTAAAGCTCATTTGCTTGCAAAAGCAAGAGGCTCGACTAAAAAA ACAGCAAGAATCATTCGCGTTAGCTTCCAATATTTGGTGGGATTGGGAAGCCGCAGAGGATTTGTATACGCCTACAGCTA ATCTACTGACGCCTGATACTTCTATTGATGACTGGCTTGTGGAGCGCTACAGCGTTAGGGCTTTGGCTGCGGAAACGGGG ATAAGTAAAAGTCAGGTAAGCCTATCTCTACAAGATATGATCTCCGTGGGTCTGGTAAAGCGGGACAGAAAATTAGGTGT ACCACGTACCAATGTTAAAGCACTTTTCGAACTCATTATATATGGACTGAGATACATATTCCCAACCAGAATAGGAGAAT TGACTCGAGGCATTGCAACATCAATTGGTGCTCCGGTACTGCAAGGAAAGCTGATGGGTGCGGGAGATGTCATACCTGTT TGGCCTGATGCGAAAGGCAATACCAAGGGCCAGTCGGTTGAGCCTCTATTTAAAACAGCAACTTATGCGGTTCGACGAGA TCCTGAAATGTATGCTTTGTTAGCGCTCATAGATGGTGTACGTATTGGGCAACCGCGTGAACGTAATTTTGCATCAGATA TGTTGATGAAACGGATGGAAGTAACTCGATGA
Upstream 100 bases:
>100_bases GCCACCGATTCTCCCTCATGGGATATAAATTTATTACTTGACTCTAGAGTTAATTGTAAAATAAATTGTCCTACGTCCTT GGACACGGGACGGTAATTGG
Downstream 100 bases:
>100_bases TTAATCGTGAGATTCAATTAGATATGCTCCAACGTGTTGCTGAAGCATTAGGGCCTGATTTACGTAAAAAAATGACTTTT GTCGGAGGGTGTACGACAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MIKMKSQDIGLMLKLICLQKQEARLKKQQESFALASNIWWDWEAAEDLYTPTANLLTPDTSIDDWLVERYSVRALAAETG ISKSQVSLSLQDMISVGLVKRDRKLGVPRTNVKALFELIIYGLRYIFPTRIGELTRGIATSIGAPVLQGKLMGAGDVIPV WPDAKGNTKGQSVEPLFKTATYAVRRDPEMYALLALIDGVRIGQPRERNFASDMLMKRMEVTR
Sequences:
>Translated_223_residues MIKMKSQDIGLMLKLICLQKQEARLKKQQESFALASNIWWDWEAAEDLYTPTANLLTPDTSIDDWLVERYSVRALAAETG ISKSQVSLSLQDMISVGLVKRDRKLGVPRTNVKALFELIIYGLRYIFPTRIGELTRGIATSIGAPVLQGKLMGAGDVIPV WPDAKGNTKGQSVEPLFKTATYAVRRDPEMYALLALIDGVRIGQPRERNFASDMLMKRMEVTR >Mature_223_residues MIKMKSQDIGLMLKLICLQKQEARLKKQQESFALASNIWWDWEAAEDLYTPTANLLTPDTSIDDWLVERYSVRALAAETG ISKSQVSLSLQDMISVGLVKRDRKLGVPRTNVKALFELIIYGLRYIFPTRIGELTRGIATSIGAPVLQGKLMGAGDVIPV WPDAKGNTKGQSVEPLFKTATYAVRRDPEMYALLALIDGVRIGQPRERNFASDMLMKRMEVTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25032; Mature: 25032
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKMKSQDIGLMLKLICLQKQEARLKKQQESFALASNIWWDWEAAEDLYTPTANLLTPDT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC SIDDWLVERYSVRALAAETGISKSQVSLSLQDMISVGLVKRDRKLGVPRTNVKALFELII CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YGLRYIFPTRIGELTRGIATSIGAPVLQGKLMGAGDVIPVWPDAKGNTKGQSVEPLFKTA HHHHHHHHHHHHHHHHHHHHHHCCHHHHCEECCCCCEEECCCCCCCCCCCCCCCHHHHHH TYAVRRDPEMYALLALIDGVRIGQPRERNFASDMLMKRMEVTR HHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIKMKSQDIGLMLKLICLQKQEARLKKQQESFALASNIWWDWEAAEDLYTPTANLLTPDT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCC SIDDWLVERYSVRALAAETGISKSQVSLSLQDMISVGLVKRDRKLGVPRTNVKALFELII CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH YGLRYIFPTRIGELTRGIATSIGAPVLQGKLMGAGDVIPVWPDAKGNTKGQSVEPLFKTA HHHHHHHHHHHHHHHHHHHHHHCCHHHHCEECCCCCEEECCCCCCCCCCCCCCCHHHHHH TYAVRRDPEMYALLALIDGVRIGQPRERNFASDMLMKRMEVTR HHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA