| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
Click here to switch to the map view.
The map label for this gene is 153948357
Identifier: 153948357
GI number: 153948357
Start: 1504331
End: 1505038
Strand: Direct
Name: 153948357
Synonym: YpsIP31758_1284
Alternate gene names: NA
Gene position: 1504331-1505038 (Clockwise)
Preceding gene: 153949646
Following gene: 153950861
Centisome position: 31.85
GC content: 36.44
Gene sequence:
>708_bases ATGATTAATCGTGAGATTCAATTAGATATGCTCCAACGTGTTGCTGAAGCATTAGGGCCTGATTTACGTAAAAAAATGAC TTTTGTCGGAGGGTGTACGACAGGTCTTTTAGTCACCGATGAGTTTACTCGGGAACAAATACGCCACACCGATGATGTTG ATCTCATTATGCATGTCATGAGCTATACAAGTTATTCAGCACTTCAGCAAGAGCTTCAAGCGCATGGATTTAAAATTGAG GTACCTGATGACGATGGTGCGCCCATTTGTGCAATGAAACTCGGTGATTTGCGAGTCGATTTTATGCCAGATGATGAAAA TATATTAGGTTTTACTAACCGATGGTATAGAAAAGCAATGGAAACAAGCACCTATTTTAATTTAGCACCTGAGCTAAGTA TTAATTTGATAAGTCCTGTTTATTTTATTGCTACTAAATTGGAAGCATACAATGGCCGTGGGAAAGGTGATCCTCTAGAA AGTCGCGATATTGAAGATATTCTCAATTTAGTTGATGGCCGACCAGAGCTTGTAAATGAAATATCTACAGCGGAAAATGA TTTAAAAATATATATTAGTCAACAAATTGAAGTCCTTATTAAATTGAGTGACTTCGATTATGTAATTCAAAGTCATACAT ATGGTGATAAAGCGCGAGAAGATGAGATCTATGAAAGGCTAGAGAAGATAATAGAAATTGGTAAATAA
Upstream 100 bases:
>100_bases TGTATGCTTTGTTAGCGCTCATAGATGGTGTACGTATTGGGCAACCGCGTGAACGTAATTTTGCATCAGATATGTTGATG AAACGGATGGAAGTAACTCG
Downstream 100 bases:
>100_bases TTATGCTAATAACATGGGTTAGCCGCAAGGGTTTGAAAAGATTTAAAAATAATGACGCAGTGGCTTTGTATGAAAATAAT AAAATATTTATTGCGATAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIE VPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLE SRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYVIQSHTYGDKAREDEIYERLEKIIEIGK
Sequences:
>Translated_235_residues MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIE VPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLE SRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYVIQSHTYGDKAREDEIYERLEKIIEIGK >Mature_235_residues MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVMSYTSYSALQQELQAHGFKIE VPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAMETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLE SRDIEDILNLVDGRPELVNEISTAENDLKIYISQQIEVLIKLSDFDYVIQSHTYGDKAREDEIYERLEKIIEIGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26906; Mature: 26906
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVM CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCHHHHHHHHH SYTSYSALQQELQAHGFKIEVPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAM HHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCEEEEEECCCCCEECHHHHHHHHHH ETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLESRDIEDILNLVDGRPELVNE HHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH ISTAENDLKIYISQQIEVLIKLSDFDYVIQSHTYGDKAREDEIYERLEKIIEIGK HHCCCCCEEEEEEEEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MINREIQLDMLQRVAEALGPDLRKKMTFVGGCTTGLLVTDEFTREQIRHTDDVDLIMHVM CCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCHHHHHHHHH SYTSYSALQQELQAHGFKIEVPDDDGAPICAMKLGDLRVDFMPDDENILGFTNRWYRKAM HHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEECCEEEEEECCCCCEECHHHHHHHHHH ETSTYFNLAPELSINLISPVYFIATKLEAYNGRGKGDPLESRDIEDILNLVDGRPELVNE HHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH ISTAENDLKIYISQQIEVLIKLSDFDYVIQSHTYGDKAREDEIYERLEKIIEIGK HHCCCCCEEEEEEEEEEEEEEECCHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA