Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153949605

Identifier: 153949605

GI number: 153949605

Start: 3310870

End: 3311229

Strand: Reverse

Name: 153949605

Synonym: YpsIP31758_2934

Alternate gene names: NA

Gene position: 3311229-3310870 (Counterclockwise)

Preceding gene: 153948553

Following gene: 153949011

Centisome position: 70.1

GC content: 45.83

Gene sequence:

>360_bases
ATGAATATATTAAGCCTGGCATTAAACGATAAACATCGATTGTATTTAGATGCCGCGGGAAATTTAGCGGTTGTTACTAA
TCTGGCCGCCTGTTTGCAGAACTGCAAAACAGCCATGCTGGCCCAACGAAATGAAATGATATACGCGATGGATGAGGGTA
TCCCATATCGCGAAACGTTGTGGGACCAATACCGGCCTGCCCAATTTGAAGCCGCCGCGCGTACTGCAATCAAGGCTATT
ACTGGCGTAAAGCAAATCACGTCTTTTTCAATCGCTCGCGCAGGCAATGATTTTTACTATAGCGCGACAATAAAAACCGA
GTGGGGAACAGGGGCCATAAACAATGAGCGAGCTTTATAA

Upstream 100 bases:

>100_bases
TTGTCAGTGCCGCAGGCGCTAAGCACAATGGCGTTAACGTTGGCGGTAATCATAAGCACAGTGGCGTACAAGGCGGCAAT
GATAATACGGGAGGTCCGCA

Downstream 100 bases:

>100_bases
TTACATTGAAGACACTGGCATTGTCATACCCGATACCGCCGATATAAAAACAGCAGTAGAGGCAGAATTTAAAGCGGCGC
TAGGTCAACAGATGTCAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNILSLALNDKHRLYLDAAGNLAVVTNLAACLQNCKTAMLAQRNEMIYAMDEGIPYRETLWDQYRPAQFEAAARTAIKAI
TGVKQITSFSIARAGNDFYYSATIKTEWGTGAINNERAL

Sequences:

>Translated_119_residues
MNILSLALNDKHRLYLDAAGNLAVVTNLAACLQNCKTAMLAQRNEMIYAMDEGIPYRETLWDQYRPAQFEAAARTAIKAI
TGVKQITSFSIARAGNDFYYSATIKTEWGTGAINNERAL
>Mature_119_residues
MNILSLALNDKHRLYLDAAGNLAVVTNLAACLQNCKTAMLAQRNEMIYAMDEGIPYRETLWDQYRPAQFEAAARTAIKAI
TGVKQITSFSIARAGNDFYYSATIKTEWGTGAINNERAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13208; Mature: 13208

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILSLALNDKHRLYLDAAGNLAVVTNLAACLQNCKTAMLAQRNEMIYAMDEGIPYRETL
CCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
WDQYRPAQFEAAARTAIKAITGVKQITSFSIARAGNDFYYSATIKTEWGTGAINNERAL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MNILSLALNDKHRLYLDAAGNLAVVTNLAACLQNCKTAMLAQRNEMIYAMDEGIPYRETL
CCEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHH
WDQYRPAQFEAAARTAIKAITGVKQITSFSIARAGNDFYYSATIKTEWGTGAINNERAL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA