| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948553
Identifier: 153948553
GI number: 153948553
Start: 3311226
End: 3311903
Strand: Reverse
Name: 153948553
Synonym: YpsIP31758_2935
Alternate gene names: NA
Gene position: 3311903-3311226 (Counterclockwise)
Preceding gene: 153947674
Following gene: 153949605
Centisome position: 70.12
GC content: 52.06
Gene sequence:
>678_bases ATGGCAGACACTACTTTAACCGATGTTGACCCGGCGTTAACCGGCTCCCTGGCGGGTACATTGGAATACGTCTTCAAGAA AATGTTGCAGGGCATTGATGGACAACTCCCCGCGCAGGTGATCAGCTACGACCGCGCAACCAATCGCGCCACTGTTCAGC CGCTTATCAGTCGTGTGACGACAGCGGGTGAGGCGGTAGAGCGCGGAACGGTTGCCAGTATGCCGGTATTGGCGCTCGGC GGGGGTGAGTTCAATATCTCATTTCCACTAAAAGCGGGGGATCGGGGCTGGATAGAAGCCAGCGATAGAGATATTTCTCT TTACCTGCAAACCACCCAGCAATCAAAGCCAAATACGTTACGCATGCATGAATTTTCTGACGGGCGTTTTATTCCTGATG TCTTTGCAGACTATGAGTTGCCCGCTGGTCACGACGATTCGCTAGTTATTCAGCATAAATCTGGTCAGACGTGGATCGGC GTAAAAGAGGCGGAAATCAGTTTAAAGGTCGGCAGTGCGGAATTTACATTAACCGAAGACCGCATAACCCTGACAGCGGG CGGTAATTCCTTTGTTGTCAGTGCCGCAGGCGCTAAGCACAATGGCGTTAACGTTGGCGGTAATCATAAGCACAGTGGCG TACAAGGCGGCAATGATAATACGGGAGGTCCGCAATGA
Upstream 100 bases:
>100_bases CGGCAGCTAATGGCACCTTTGTTATTTACAAACTCAGTTATGACATCAGTAACCGAGACACACCTTTTTATCACACGGCG GAATGTCGGAGATTGGGGCT
Downstream 100 bases:
>100_bases ATATATTAAGCCTGGCATTAAACGATAAACATCGATTGTATTTAGATGCCGCGGGAAATTTAGCGGTTGTTACTAATCTG GCCGCCTGTTTGCAGAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MADTTLTDVDPALTGSLAGTLEYVFKKMLQGIDGQLPAQVISYDRATNRATVQPLISRVTTAGEAVERGTVASMPVLALG GGEFNISFPLKAGDRGWIEASDRDISLYLQTTQQSKPNTLRMHEFSDGRFIPDVFADYELPAGHDDSLVIQHKSGQTWIG VKEAEISLKVGSAEFTLTEDRITLTAGGNSFVVSAAGAKHNGVNVGGNHKHSGVQGGNDNTGGPQ
Sequences:
>Translated_225_residues MADTTLTDVDPALTGSLAGTLEYVFKKMLQGIDGQLPAQVISYDRATNRATVQPLISRVTTAGEAVERGTVASMPVLALG GGEFNISFPLKAGDRGWIEASDRDISLYLQTTQQSKPNTLRMHEFSDGRFIPDVFADYELPAGHDDSLVIQHKSGQTWIG VKEAEISLKVGSAEFTLTEDRITLTAGGNSFVVSAAGAKHNGVNVGGNHKHSGVQGGNDNTGGPQ >Mature_224_residues ADTTLTDVDPALTGSLAGTLEYVFKKMLQGIDGQLPAQVISYDRATNRATVQPLISRVTTAGEAVERGTVASMPVLALGG GEFNISFPLKAGDRGWIEASDRDISLYLQTTQQSKPNTLRMHEFSDGRFIPDVFADYELPAGHDDSLVIQHKSGQTWIGV KEAEISLKVGSAEFTLTEDRITLTAGGNSFVVSAAGAKHNGVNVGGNHKHSGVQGGNDNTGGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23828; Mature: 23697
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTTLTDVDPALTGSLAGTLEYVFKKMLQGIDGQLPAQVISYDRATNRATVQPLISRVT CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH TAGEAVERGTVASMPVLALGGGEFNISFPLKAGDRGWIEASDRDISLYLQTTQQSKPNTL HHHHHHHCCCCCCCCEEEECCCEEEEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCEE RMHEFSDGRFIPDVFADYELPAGHDDSLVIQHKSGQTWIGVKEAEISLKVGSAEFTLTED EEEECCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCEEEEEECC RITLTAGGNSFVVSAAGAKHNGVNVGGNHKHSGVQGGNDNTGGPQ EEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ADTTLTDVDPALTGSLAGTLEYVFKKMLQGIDGQLPAQVISYDRATNRATVQPLISRVT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHHHHHH TAGEAVERGTVASMPVLALGGGEFNISFPLKAGDRGWIEASDRDISLYLQTTQQSKPNTL HHHHHHHCCCCCCCCEEEECCCEEEEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCEE RMHEFSDGRFIPDVFADYELPAGHDDSLVIQHKSGQTWIGVKEAEISLKVGSAEFTLTED EEEECCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEEEECCEEEEEECC RITLTAGGNSFVVSAAGAKHNGVNVGGNHKHSGVQGGNDNTGGPQ EEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA