| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948948
Identifier: 153948948
GI number: 153948948
Start: 1081730
End: 1083901
Strand: Direct
Name: 153948948
Synonym: YpsIP31758_0900
Alternate gene names: NA
Gene position: 1081730-1083901 (Clockwise)
Preceding gene: 153948382
Following gene: 153949554
Centisome position: 22.9
GC content: 46.09
Gene sequence:
>2172_bases ATGGGCCTCCTAATGGGCATGCTAGGTATGGCGGTACCTCCATCACAGGCTTCTTCTGATAATACTGGCTGTGTGTGGGG AAAATATTGCCCGCTCAGTGGTGTACCCTTTTTGGATGTTTACAATGATACTCGGGTTAATATGATGTTATTGGTTGGAG AACCAAAAAATTTCATATTGCCACGTTTAACGATGCCAGCGGATATTACCCGTAGTAGGAATTACCATTTTGGTGAGTTT TATTATGATGAAATGAGTTTTCCGAAGCGGGAAAAAAGTCTTACAGATGAGAATAATGATAGCCCTTCGGAAGAAACACC ATTTGATAAGATGGCAAAGACGCTAGGCATCAATTCGGCTTCGTTTAAGGGAACCAATGCCCGATATAGAGAAGCACGGC ATATCTCCAATAATCCCGCATCAGTTGAGCAATTTTTTACCGCTTTACTGGCAGACTCGTCCTTAACTGCCGATGATCGA CATAATTTAGCCCTCTGGCGATCCAATATTTTTCATAATGTCGATGCACCGATCGATGGTGGAATTACACCGCCACCTTT TAACATTGTGCCAGGCTCACATGTTGATGCTTTTAGCGATTATCTTCATGGTGCCAATGCATTTTATCGGGGCGATTACC CAGAGGCCACCGCTTTATTTTCTGCCCTCCAAAAGAGTTCTCAAGCATGGGTCGCAGAAACAGCGACTTATATGTTGTTC CGAGTTGCGCTCAATGAGAGCAGTACAAATGCGTCGGATAAATATGGCATGTTTGAAACTAAAAATATCAATCAGGATGC CGCCCGTCAGGCATTGGATTATTCTCGGGCCTATTTAGTTGCTTATCCCCAAGGCATTTACGCAGAGTCGATTCAGGGGT TGGAGCGCCGTATTTACTGGTACCTCTCTGATTGGCAACAACTGGCGCGGCTGTATGAAGAGACATTACTGGCAGCACCG AATGCTGAAGCTTTGTGGGATACCGTATCAGAAGTTGATGCTAAATTTATCAGCAAAGATGCCTTTGGTGGCGAGCCCTT TATCAGCGATATGCAAGCACCTTTACTGACCTTCACACAAACATTACGTTGGTTGCGATTAGGGGGGCGCCAGAGTGGCT CTGAGTTGGAGGTTACGCAGGAGAAACTGGCAAGTTATAAACCGATGTTTGTCGATGCGGATAGGCTCCCCCTTTGGCAG TATCTACAGACGGCCTGGCTCTATTATCATGAGCAAGATTATGCCGGTGTCGTCGCCACTGTCTCGGCTGTCGACTCTCT GCCAGCCACTGACATTGTGACCTTCAGTCAACAGATTCTATATGGTGATGCATTGGTGGCTCAACAACAATGGTCACAGG CCGAAGCACATTGGCGCAAGCTGCTGGGCCTGGTGCAATCGCCGCAACAACAGCAATATCTGCAACTCAAACTCGCCGCG GTTCTGGTGAACAGTGATCAAATTGAGGCCATATTTACCGCAGATAGCCCAATCAAAAACCTGCGTTATCGTTCTCTGAT ACTCAAAACAAAAGCTCAAAAAGCACTTTTACAACAGCAAGTTATTTCTGGTGCTAATGATGAGGAAAAAACCATTGCTC TGCACACGCTATTACTGCGGGATCTTATGCTTGGTGATTATCAGGGTTATGAGCAGGATAAACAGTTAAGCCCTCATATT CAGCAATCCGTCGATCAAAAAAGCTTTGCCGATGTAGACCTGGCGGCGTTCGATTGGCAGGGCGATAATGTGGAGCAGGG CTATGCCTGTGCTGCGTTAGATGGGACGGTAAAAGCATTGGTTAAAAATAAAACGGATGGTCATGCCCTCAACTGCTTGG GAGAATTCTTCCGTGTAACTGACATCAATATCAATACTTATCAGGAAGGGGAGGGCAATGAGGTGCTGAATGTCGCAGTC CATGCACATGAAACAGTGATAACTCAGCCCAATCGTTTCGATTATTATCAACACGTTATCAACGACCCGAAGGCGGAGCC AGAAGATAAAAGCTATGCGCTTTACCGGGCTGTTATGTGCTATGCCCCATCGGGCTATAATCAATGTGGGGGTGAGGATG TCGATATTGCAACACGTAAGCGTTGGTTTAGCTCATTGAAAACTCAGTATAAAGGTAGCCGATGGGCAGAACGGCTCAAC TATTACTGGTAA
Upstream 100 bases:
>100_bases ATTTCAGTGCTTTCTTGTTCTTTTTGCTGAAAATATAAGCGACAATGTCGGATTTCCTGAAGGGTGTCAAGCGAGAATGA AAATAAACAGCAAGTTATGG
Downstream 100 bases:
>100_bases GCTGCCTATTAGCGCTATTTATGCCGCCCGCGATGGCAGAGGTTAGCGACAAACTGCAGTTGAGCCATAAGGTGTATGCC CATGATTATCAGGCGTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 723; Mature: 722
Protein sequence:
>723_residues MGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEF YYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDR HNLALWRSNIFHNVDAPIDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLF RVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAP NAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQ YLQTAWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAA VLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHI QQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAV HAHETVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLN YYW
Sequences:
>Translated_723_residues MGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEF YYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDR HNLALWRSNIFHNVDAPIDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLF RVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAP NAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQ YLQTAWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAA VLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHI QQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAV HAHETVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLN YYW >Mature_722_residues GLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFILPRLTMPADITRSRNYHFGEFY YDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSASFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRH NLALWRSNIFHNVDAPIDGGITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLFR VALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYWYLSDWQQLARLYEETLLAAPN AEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQTLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQY LQTAWLYYHEQDYAGVVATVSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAAV LVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLRDLMLGDYQGYEQDKQLSPHIQ QSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKALVKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVH AHETVITQPNRFDYYQHVINDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLNY YW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81571; Mature: 81440
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFIL CCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCC PRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSA CCCCCCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCC SFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPIDG CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC GITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLF CCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH RVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYW HHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH YLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVAT HHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHH VSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLR HEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKAL HHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHH VKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVI HHCCCCCHHHHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHH NDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLN CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHC YYW CCC >Mature Secondary Structure GLLMGMLGMAVPPSQASSDNTGCVWGKYCPLSGVPFLDVYNDTRVNMMLLVGEPKNFIL CHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEEEEEEEECCCCCCC PRLTMPADITRSRNYHFGEFYYDEMSFPKREKSLTDENNDSPSEETPFDKMAKTLGINSA CCCCCCCHHHCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCC SFKGTNARYREARHISNNPASVEQFFTALLADSSLTADDRHNLALWRSNIFHNVDAPIDG CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCC GITPPPFNIVPGSHVDAFSDYLHGANAFYRGDYPEATALFSALQKSSQAWVAETATYMLF CCCCCCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH RVALNESSTNASDKYGMFETKNINQDAARQALDYSRAYLVAYPQGIYAESIQGLERRIYW HHHHCCCCCCCCCCCCCEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHH YLSDWQQLARLYEETLLAAPNAEALWDTVSEVDAKFISKDAFGGEPFISDMQAPLLTFTQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH TLRWLRLGGRQSGSELEVTQEKLASYKPMFVDADRLPLWQYLQTAWLYYHEQDYAGVVAT HHHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHEECCCCCHHHHH VSAVDSLPATDIVTFSQQILYGDALVAQQQWSQAEAHWRKLLGLVQSPQQQQYLQLKLAA HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH VLVNSDQIEAIFTADSPIKNLRYRSLILKTKAQKALLQQQVISGANDEEKTIALHTLLLR HEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DLMLGDYQGYEQDKQLSPHIQQSVDQKSFADVDLAAFDWQGDNVEQGYACAALDGTVKAL HHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHH VKNKTDGHALNCLGEFFRVTDININTYQEGEGNEVLNVAVHAHETVITQPNRFDYYQHVI HHCCCCCHHHHHHHHHHEEEEECEECCCCCCCCCEEEEEEEECCEEEECCCHHHHHHHHH NDPKAEPEDKSYALYRAVMCYAPSGYNQCGGEDVDIATRKRWFSSLKTQYKGSRWAERLN CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHC YYW CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA