| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949553
Identifier: 153949553
GI number: 153949553
Start: 4173268
End: 4174791
Strand: Reverse
Name: 153949553
Synonym: YpsIP31758_3699
Alternate gene names: NA
Gene position: 4174791-4173268 (Counterclockwise)
Preceding gene: 153948995
Following gene: 153950034
Centisome position: 88.39
GC content: 49.61
Gene sequence:
>1524_bases ATGACGGCAAACAGTTTCCTTGAATATTTCCTGGTGCTGTTCGGGTGGATGCTAAACAACGCGCTGTGGAATATTTTGCT GGGCACAGGACTGTTCGCCTTGCCACTGGTGTTTAAAGTGCTCGGTATTTGGCTAAAAGTGCGTGAAGAGGGCGCGGATG AAGGCAATAAAGGGGTGCTGGCGCTGCCGCGCGTGGAACATGCCATCTACGTATCATTTTGTGTCATGTTGTTTTGCTGC ATCCCCTTGCTGCCGGTGGATATCAGCACCGTCCAGTTTGACAGCTCCCGCACCAAACAATGTGGTGTAAACGTCCCTGC GCCACAAAATTCTGGTTATAAGGCACTGGTCAATGATTTTGACGGCAAAACAGCAGAAGTACCGGTGTGGTGGTATCTAC TACACATGGTATCGAAAGGCACCACTCAGGCTATGACAGCTTCTATCCCTTGTGGTAATCAACTGCGGCAACTGCGTTTT GACGTGCAAAACACCAAGATCCGTGACCCCATCGTGCTACAGGAAGTACAGGATTTTGCAGATCAGTGTTACTCGCGCGC TTACTTTAAGTTGAAGAACAGCAATAGCCAATTGAGTGATGCCACTATCAATAGTGTGGGCTGGATGGGGAGTCGATATT TTCTCACGGTTGGGGGCTACTATGACCATTACACTTCGACTGAACCGCGCAGTCTGTGGCCCTATAATAACAACAGAGAC AATGGCTATCCTGATGTCGGCCGGGGCGGCTATCCGACGTGTAAACAGTGGTGGTCTGATGGCACTAACGGCCTAAAAAC GCGTGTTCTGGCCAACCTTACCGCCGCCACTAAAATAGCGCTACAGCTCAGGTACAGTAAAGATCAGTGGGAAGAAATGG CCCTGCGTTGGCTGGTAAGCTCGCGTAACGTTGACCTATCTGGTCGTGGTGAGACTTATGCAATAAGCGGTAATGATGCC ACATCTGGACTGATGGGGAACGTCACTCGCCTGGTCTCTTCCGTTGGGTTAGGGTTGAAGCAAGCAGAGGCTTTGCCTGG ATTTGATGCGCTGAAACAGGCGCTGCCAATGATTCAGGCATTACTTGAGATGATGATCATTATCGCCATCCCGATATTAA TGATGTTCAGTGCCTACGAGCCGAAAACGGTGGTGACTATTTCCTTTGCATTATTTGCCCTGATGTTCATTACGTTCTGG TGGGAACTGGCGGGCTGGCTTGATGACAGGTTGATCACTATTCTTTATGACAATATGGCGGAGCAAGGGATGATTAACAG CAGCGTGCCGTTCGCCGGGTTCTTCAGCTCGACAGCGGATGGTTGGATCATGAACCTGGTATTGGGGATGATGTATGTGG TTTTTCCTATGTTTTGGCTGGGAATGCTGAGTTGGGTCGGCGTACACTTGGGCGGAGCAATTTCATCAGCGATGGAAAAA GGCTCAGTTCAATCCAAGCAGGCAGGGGAAGAAGCTGGAAAAAAAGCACAAGGGACAGCGGTAAAACGAATAACTAAAGC TTAA
Upstream 100 bases:
>100_bases AGCGTCAGGGGCGACGTAATCAGGACAACCGTCTACAGCAGCAGAGCGGGGATCAAGATCAGGGCTTTAGCCAGATGAGC CAGAAAACGAGAGAACCCTA
Downstream 100 bases:
>100_bases TTTGGACATGAGCTAAATGACATCTAACCATTCAGCTCAAATCGTCTTCATCATAATGAAGTTTCTCGCCATTTACGTAG TTACCCCAGCCTTGAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTANSFLEYFLVLFGWMLNNALWNILLGTGLFALPLVFKVLGIWLKVREEGADEGNKGVLALPRVEHAIYVSFCVMLFCC IPLLPVDISTVQFDSSRTKQCGVNVPAPQNSGYKALVNDFDGKTAEVPVWWYLLHMVSKGTTQAMTASIPCGNQLRQLRF DVQNTKIRDPIVLQEVQDFADQCYSRAYFKLKNSNSQLSDATINSVGWMGSRYFLTVGGYYDHYTSTEPRSLWPYNNNRD NGYPDVGRGGYPTCKQWWSDGTNGLKTRVLANLTAATKIALQLRYSKDQWEEMALRWLVSSRNVDLSGRGETYAISGNDA TSGLMGNVTRLVSSVGLGLKQAEALPGFDALKQALPMIQALLEMMIIIAIPILMMFSAYEPKTVVTISFALFALMFITFW WELAGWLDDRLITILYDNMAEQGMINSSVPFAGFFSSTADGWIMNLVLGMMYVVFPMFWLGMLSWVGVHLGGAISSAMEK GSVQSKQAGEEAGKKAQGTAVKRITKA
Sequences:
>Translated_507_residues MTANSFLEYFLVLFGWMLNNALWNILLGTGLFALPLVFKVLGIWLKVREEGADEGNKGVLALPRVEHAIYVSFCVMLFCC IPLLPVDISTVQFDSSRTKQCGVNVPAPQNSGYKALVNDFDGKTAEVPVWWYLLHMVSKGTTQAMTASIPCGNQLRQLRF DVQNTKIRDPIVLQEVQDFADQCYSRAYFKLKNSNSQLSDATINSVGWMGSRYFLTVGGYYDHYTSTEPRSLWPYNNNRD NGYPDVGRGGYPTCKQWWSDGTNGLKTRVLANLTAATKIALQLRYSKDQWEEMALRWLVSSRNVDLSGRGETYAISGNDA TSGLMGNVTRLVSSVGLGLKQAEALPGFDALKQALPMIQALLEMMIIIAIPILMMFSAYEPKTVVTISFALFALMFITFW WELAGWLDDRLITILYDNMAEQGMINSSVPFAGFFSSTADGWIMNLVLGMMYVVFPMFWLGMLSWVGVHLGGAISSAMEK GSVQSKQAGEEAGKKAQGTAVKRITKA >Mature_506_residues TANSFLEYFLVLFGWMLNNALWNILLGTGLFALPLVFKVLGIWLKVREEGADEGNKGVLALPRVEHAIYVSFCVMLFCCI PLLPVDISTVQFDSSRTKQCGVNVPAPQNSGYKALVNDFDGKTAEVPVWWYLLHMVSKGTTQAMTASIPCGNQLRQLRFD VQNTKIRDPIVLQEVQDFADQCYSRAYFKLKNSNSQLSDATINSVGWMGSRYFLTVGGYYDHYTSTEPRSLWPYNNNRDN GYPDVGRGGYPTCKQWWSDGTNGLKTRVLANLTAATKIALQLRYSKDQWEEMALRWLVSSRNVDLSGRGETYAISGNDAT SGLMGNVTRLVSSVGLGLKQAEALPGFDALKQALPMIQALLEMMIIIAIPILMMFSAYEPKTVVTISFALFALMFITFWW ELAGWLDDRLITILYDNMAEQGMINSSVPFAGFFSSTADGWIMNLVLGMMYVVFPMFWLGMLSWVGVHLGGAISSAMEKG SVQSKQAGEEAGKKAQGTAVKRITKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56366; Mature: 56235
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTANSFLEYFLVLFGWMLNNALWNILLGTGLFALPLVFKVLGIWLKVREEGADEGNKGVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE ALPRVEHAIYVSFCVMLFCCIPLLPVDISTVQFDSSRTKQCGVNVPAPQNSGYKALVNDF ECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCCCCCCCCCCCHHHHHCC DGKTAEVPVWWYLLHMVSKGTTQAMTASIPCGNQLRQLRFDVQNTKIRDPIVLQEVQDFA CCCCCCCHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH DQCYSRAYFKLKNSNSQLSDATINSVGWMGSRYFLTVGGYYDHYTSTEPRSLWPYNNNRD HHHHHHHHEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC NGYPDVGRGGYPTCKQWWSDGTNGLKTRVLANLTAATKIALQLRYSKDQWEEMALRWLVS CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH SRNVDLSGRGETYAISGNDATSGLMGNVTRLVSSVGLGLKQAEALPGFDALKQALPMIQA CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH LLEMMIIIAIPILMMFSAYEPKTVVTISFALFALMFITFWWELAGWLDDRLITILYDNMA HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQGMINSSVPFAGFFSSTADGWIMNLVLGMMYVVFPMFWLGMLSWVGVHLGGAISSAMEK HCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSVQSKQAGEEAGKKAQGTAVKRITKA CCCCHHHHHHHHCCCCCCHHHHHHHCC >Mature Secondary Structure TANSFLEYFLVLFGWMLNNALWNILLGTGLFALPLVFKVLGIWLKVREEGADEGNKGVL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE ALPRVEHAIYVSFCVMLFCCIPLLPVDISTVQFDSSRTKQCGVNVPAPQNSGYKALVNDF ECCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHCCCCCCCCCCCCCHHHHHCC DGKTAEVPVWWYLLHMVSKGTTQAMTASIPCGNQLRQLRFDVQNTKIRDPIVLQEVQDFA CCCCCCCHHHHHHHHHHHCCCCHHEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHH DQCYSRAYFKLKNSNSQLSDATINSVGWMGSRYFLTVGGYYDHYTSTEPRSLWPYNNNRD HHHHHHHHEEECCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC NGYPDVGRGGYPTCKQWWSDGTNGLKTRVLANLTAATKIALQLRYSKDQWEEMALRWLVS CCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHH SRNVDLSGRGETYAISGNDATSGLMGNVTRLVSSVGLGLKQAEALPGFDALKQALPMIQA CCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHH LLEMMIIIAIPILMMFSAYEPKTVVTISFALFALMFITFWWELAGWLDDRLITILYDNMA HHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQGMINSSVPFAGFFSSTADGWIMNLVLGMMYVVFPMFWLGMLSWVGVHLGGAISSAMEK HCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSVQSKQAGEEAGKKAQGTAVKRITKA CCCCHHHHHHHHCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA