| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is nagK
Identifier: 153949530
GI number: 153949530
Start: 1861362
End: 1862276
Strand: Direct
Name: nagK
Synonym: YpsIP31758_1603
Alternate gene names: 153949530
Gene position: 1861362-1862276 (Clockwise)
Preceding gene: 153949780
Following gene: 153947974
Centisome position: 39.41
GC content: 50.6
Gene sequence:
>915_bases ATGTATTACGGTTTTGATATGGGCGGGACCAAAATAGAGCTAGGCGTTTTTGATGAAAACCTGCAGCGAATATGGCATAA GCGAGTGCCTACGCCACGTGAGGATTACCCGCAGTTACTGCAAATATTGCGGGATTTAACCGAGGAAGCCGATACTTATT GCGGTGTTCAAGGCAGTGTGGGTATCGGTATTCCAGGGCTACCCAATGCGGATGATGGCACGGTATTTACTGCGAATGTA CCGTCTGCGATGGGGCAACCATTGCAGGCTGATCTTTCCCGCTTGATCCAGCGTGAAGTCCGTATTGATAACGATGCCAA CTGTTTTGCTCTCTCCGAAGCCTGGGACCCTGAGTTTCGCACTTACCCAACGGTGCTGGGGCTTATTCTCGGCACCGGTG TTGGTGGTGGGTTAATTGTTAATGGCAGTATTGTCAGTGGGCGTAACCACATCACTGGCGAGTTCGGTCATTTCCGTTTA CCAGTAGATGCACTGGATATTCTTGGTGCCGATATTCCCCACGTTCCCTGTGGTTGTGGCCATCGCGGTTGTATAGAGAA TTATATTTCTGGGCGCGGTTTCGAGTGGATGTACAGTCATTTTTATCAACATACCTTACCTGCCACCGACATTATTGCCC ATTATGCTGCGGGTGAGCCAAAGGCGGTGGCACATGTTGAGCGCTTTATGGATGTGCTGGCGGTCTGTTTGGGCAATCTT TTGACTATGCTCGATCCCCATTTGGTCGTGGTGGGCGGGGGGTTGTCTAATTTCGAAAAAATCTATCAGGAGCTGCCAAA GCGCCTGCCTGCGCATTTATTGCGAGTGGCCCGGTTACCGCGTATCGAAAAAGCGCGTTATGGTGATTCCGGGGGCGTTC GTGGTGCAGCGTTTCTGCATTTGGCAGAAAAATAA
Upstream 100 bases:
>100_bases GGTGCTCAGCTTGATTGCCAGTTGGTATCCGGCACGTCGCGCCAGTCGTATTGATCCGGCACGGGTCCTCAGCGGGCAGT AATTGAAGAAAGGCAGGCTT
Downstream 100 bases:
>100_bases TCGTCACGATTAATAACAAGACAGATAAAGAAAAAGAGGCAAAAGGTTATGCGCATTCGCCATAGGCTGTGTCGGTTTCG TAAGAGTAAGCATGTGCGGC
Product: N-acetyl-D-glucosamine kinase
Products: NA
Alternate protein names: GlcNAc kinase
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPHVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK
Sequences:
>Translated_304_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPHVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK >Mature_304_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPHVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLHLAEK
Specific function: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family. NagK subfamily
Homologues:
Organism=Escherichia coli, GI1787363, Length=303, Percent_Identity=64.3564356435644, Blast_Score=410, Evalue=1e-116, Organism=Escherichia coli, GI87081733, Length=299, Percent_Identity=39.7993311036789, Blast_Score=211, Evalue=5e-56, Organism=Escherichia coli, GI1790522, Length=305, Percent_Identity=26.2295081967213, Blast_Score=70, Evalue=2e-13,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NAGK_YERP3 (A7FH52)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001400580.1 - ProteinModelPortal: A7FH52 - SMR: A7FH52 - STRING: A7FH52 - GeneID: 5386543 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_1603 - NMPDR: fig|349747.3.peg.932 - eggNOG: COG1940 - HOGENOM: HBG730260 - OMA: GMEDADD - ProtClustDB: PRK13310 - BioCyc: YPSE349747:YPSIP31758_1603-MONOMER - HAMAP: MF_01271 - InterPro: IPR000600
Pfam domain/function: PF00480 ROK
EC number: =2.7.1.59
Molecular weight: Translated: 33303; Mature: 33303
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSV CCEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFR CCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH TYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPHVPCGCG HHHHHHHHHHHCCCCCCEEEECEEECCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCC HRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL CHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLH HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHEEEE LAEK ECCC >Mature Secondary Structure MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSV CCEEECCCCCEEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFR CCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH TYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPHVPCGCG HHHHHHHHHHHCCCCCCEEEECEEECCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCC HRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL CHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTMLDPHLVVVGGGLSNFEKIYQELPKRLPAHLLRVARLPRIEKARYGDSGGVRGAAFLH HHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHEEEE LAEK ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA