| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949482
Identifier: 153949482
GI number: 153949482
Start: 2990087
End: 2991178
Strand: Reverse
Name: 153949482
Synonym: YpsIP31758_2635
Alternate gene names: NA
Gene position: 2991178-2990087 (Counterclockwise)
Preceding gene: 153949787
Following gene: 153947939
Centisome position: 63.33
GC content: 50.27
Gene sequence:
>1092_bases ATGTTATTACGTATTTTTTGGAGTTTATGCCTCTGGTGGGGGATCAGCAGCAGTGCGCTGGCAGAGATCCATCTCAAAGA TGTTGATGGTCGTGAGGTCACTCTGGCGGCACCAGCACAACGTGTTTATATCGGTTTTTATTATGAGGATTTTTTGGCGA TCAATGGGCCAGACAGTTATCAACATGTCGTGGCCTTCTCTAAAAGTGATTGGAGCCTACGGACCAGCCAATGGCCGCGC TATCAGGCAGCCCTACGGCGTTTAAGCCAATTGGTGGATGTTGGGTCTTTGTATAACCAAAGTTTTGACTTTGAGCGCCT GCTGGCGACCCGGCCAGATTTACTGATTTTGGCAAAATGGCAACTCGAAGGCTTCGCCAACTATTTGCCGGTATTACAGC AACTCTCTATTCCCTATGTCGTGGTCGATTTTAATCAGGGAGAGGACGCTAAGCTCACCAGTATTCGGGTAATGGGGCAA GCATTAGGTCATGGCGAACGGGCTGAACGCTTGGCTATCGCCTATCAACAAGGCATTGCAGATATTCGCAGACGAATTAC CCAAGCGAATTTGCCCTCGCCGAAAACCTATATTGAACTCGGCGATAAAGGGCCGGGTGAATACAGCAGCAGCTATGGGA CGTCTATTTGGGGGCCCTTGCTTCAACAGGCCGGAGCCAACAATATCGCGACAGGCGTGGTCACCACGCCTTCTCCACTG CGCGCAGAGTATGTGTTATCTCAGAAACCCGAGGTGATTTTTCTGGCGGGCGGAGACTGGCCGAAAATGCCGAATGCGGT GTCGATGGGGTTCGGTGCTAGACCTGAAACCCTCCAGCAAAGTATGACCCAATATGCTCAGCGTCCCGGCTGGTCACAAT TTCCCGCGATTAAACAAACACGTTTTTACGCGCTCTATCATGGCGGCGTCCGCACGTTGTACGACTACATTTTTGTGCAG TTTGTCGCCAAGGCGCTTTTTCCTTCGGCATTTGAAGATGTGAACCCGCAACGTAATCTCGAAACGTTTTATGAAGAGTA TCTGCCCATCAAAGCCGATGGCGTATTTATGCAGCAATGGCAGGGAGAATAA
Upstream 100 bases:
>100_bases TCACTCACTGAGCTTTGCCATCAGCTTCGATCTTTTTCTTGAGTACAACATTTAATTGATACATTATAACATAACAATCA AATCAACGAGAATATCCTTT
Downstream 100 bases:
>100_bases TGGCAACCTTTTTAGAACCCCTCACGCAGGGACGGCAATTTTTTCAGCAACTTCATCTACGACGCGGGTTATTCACACTG GCATTGATTGGCTCGCTACT
Product: iron chelate ABC transporter periplasmic protein
Products: NA
Alternate protein names: Ferrichrome/Ferrioxamine B Periplasmic Transporter; Iron Transporter; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Iron(III) ABC Transporter; Ferrisiderophore Receptor Irp6A; Copper Amine Oxidase Domain Protein; Copper Amine Oxidase Domain-Containing Protein
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MLLRIFWSLCLWWGISSSALAEIHLKDVDGREVTLAAPAQRVYIGFYYEDFLAINGPDSYQHVVAFSKSDWSLRTSQWPR YQAALRRLSQLVDVGSLYNQSFDFERLLATRPDLLILAKWQLEGFANYLPVLQQLSIPYVVVDFNQGEDAKLTSIRVMGQ ALGHGERAERLAIAYQQGIADIRRRITQANLPSPKTYIELGDKGPGEYSSSYGTSIWGPLLQQAGANNIATGVVTTPSPL RAEYVLSQKPEVIFLAGGDWPKMPNAVSMGFGARPETLQQSMTQYAQRPGWSQFPAIKQTRFYALYHGGVRTLYDYIFVQ FVAKALFPSAFEDVNPQRNLETFYEEYLPIKADGVFMQQWQGE
Sequences:
>Translated_363_residues MLLRIFWSLCLWWGISSSALAEIHLKDVDGREVTLAAPAQRVYIGFYYEDFLAINGPDSYQHVVAFSKSDWSLRTSQWPR YQAALRRLSQLVDVGSLYNQSFDFERLLATRPDLLILAKWQLEGFANYLPVLQQLSIPYVVVDFNQGEDAKLTSIRVMGQ ALGHGERAERLAIAYQQGIADIRRRITQANLPSPKTYIELGDKGPGEYSSSYGTSIWGPLLQQAGANNIATGVVTTPSPL RAEYVLSQKPEVIFLAGGDWPKMPNAVSMGFGARPETLQQSMTQYAQRPGWSQFPAIKQTRFYALYHGGVRTLYDYIFVQ FVAKALFPSAFEDVNPQRNLETFYEEYLPIKADGVFMQQWQGE >Mature_363_residues MLLRIFWSLCLWWGISSSALAEIHLKDVDGREVTLAAPAQRVYIGFYYEDFLAINGPDSYQHVVAFSKSDWSLRTSQWPR YQAALRRLSQLVDVGSLYNQSFDFERLLATRPDLLILAKWQLEGFANYLPVLQQLSIPYVVVDFNQGEDAKLTSIRVMGQ ALGHGERAERLAIAYQQGIADIRRRITQANLPSPKTYIELGDKGPGEYSSSYGTSIWGPLLQQAGANNIATGVVTTPSPL RAEYVLSQKPEVIFLAGGDWPKMPNAVSMGFGARPETLQQSMTQYAQRPGWSQFPAIKQTRFYALYHGGVRTLYDYIFVQ FVAKALFPSAFEDVNPQRNLETFYEEYLPIKADGVFMQQWQGE
Specific function: Unknown
COG id: COG0614
COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41066; Mature: 41066
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50983 FE_B12_PBP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRIFWSLCLWWGISSSALAEIHLKDVDGREVTLAAPAQRVYIGFYYEDFLAINGPDSY CHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCC QHVVAFSKSDWSLRTSQWPRYQAALRRLSQLVDVGSLYNQSFDFERLLATRPDLLILAKW EEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEE QLEGFANYLPVLQQLSIPYVVVDFNQGEDAKLTSIRVMGQALGHGERAERLAIAYQQGIA CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DIRRRITQANLPSPKTYIELGDKGPGEYSSSYGTSIWGPLLQQAGANNIATGVVTTPSPL HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECEEECCCCC RAEYVLSQKPEVIFLAGGDWPKMPNAVSMGFGARPETLQQSMTQYAQRPGWSQFPAIKQT CHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH RFYALYHGGVRTLYDYIFVQFVAKALFPSAFEDVNPQRNLETFYEEYLPIKADGVFMQQW EEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCEEHHCC QGE CCC >Mature Secondary Structure MLLRIFWSLCLWWGISSSALAEIHLKDVDGREVTLAAPAQRVYIGFYYEDFLAINGPDSY CHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEEEEECCCCCC QHVVAFSKSDWSLRTSQWPRYQAALRRLSQLVDVGSLYNQSFDFERLLATRPDLLILAKW EEEEEECCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEE QLEGFANYLPVLQQLSIPYVVVDFNQGEDAKLTSIRVMGQALGHGERAERLAIAYQQGIA CHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DIRRRITQANLPSPKTYIELGDKGPGEYSSSYGTSIWGPLLQQAGANNIATGVVTTPSPL HHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECEEECCCCC RAEYVLSQKPEVIFLAGGDWPKMPNAVSMGFGARPETLQQSMTQYAQRPGWSQFPAIKQT CHHHHHCCCCCEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHH RFYALYHGGVRTLYDYIFVQFVAKALFPSAFEDVNPQRNLETFYEEYLPIKADGVFMQQW EEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCCEEHHCC QGE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA