| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is fecC [C]
Identifier: 153947939
GI number: 153947939
Start: 2989029
End: 2990087
Strand: Reverse
Name: fecC [C]
Synonym: YpsIP31758_2634
Alternate gene names: 153947939
Gene position: 2990087-2989029 (Counterclockwise)
Preceding gene: 153949482
Following gene: 153948623
Centisome position: 63.3
GC content: 51.65
Gene sequence:
>1059_bases ATGGCAACCTTTTTAGAACCCCTCACGCAGGGACGGCAATTTTTTCAGCAACTTCATCTACGACGCGGGTTATTCACACT GGCATTGATTGGCTCGCTACTGGCCGCTATGGTCATCGATCTGGTCACTGGCGCGGCCAACCTTAGCCCACTTGATGTAT TGCGGCTGTTTCTGGTGGATTCTTCGCAGCATGATGAACTACACCAGATCATTTTTTGGTCCATTCGTTTGCCGATGACG TTAACCGCCGTGGTGGTGGGCGCGAGTTTGGGTTTGGCTGGCTTGTTGATGCAAACCGTCTTGGCGAATCCGTTAGCCAG TCCTTATACCTTGGGGATTTCAGCCGCGGCAGGATTTGGTGCCGCATTATCGATCATCACTGGCTTCAGCGTGGGGGGAG TCTTGGCATTAGGCACTCCATTATTGGCTTCACTGATGGCATTACTGGCCTGCCTGCCCATTTACTTTCTGGGCCAACGG CAGGGGATGACACCGCAAATTCTGGTGTTGAGCGGCATTGTGGTGCTGTTCTTCTTCCAGTCGTTGCAATCACTCATGTT ATTTCTGGCCTCACCAGAAGCGATGCAACAAATTGTATTCTGGCTGTTTGGCAGCCTGCTGAAAGCCAATATGCAGGGGG TGCTAATGACGGGCAGCGTACTGGCTTGTTCACTGGTTATCTGTTTGCAGCAGGCATGGCGATTGACCGCGCTTTCAGCG GGGGAGGAGCAAGCGTTAGGTTTGGGAATTAACGTAAGCGCCTTACGTAAGTTAGCGTTTCTTCTGGCGACCTTGTTGAC CGCCGCTTCTGTGTCTTTTGTCGGCACTATCGGCTTTATCGGTTTGGTCGCCCCTCACTTCGCCCGTATGTTGGTCGGCG AAGATCAACGCTATCTGATCGGTATTTCGGCACTTTGTGGCAGCCTGCTATTGGTTCTGGCCTCTATCATTTCCAAACTC ATACTGCCAAATGGTGTCGTGCCGATCGGCATTATTATTGCGCTGATCGGTGTCCCGGTATTGTTCTATTTTGTGACTAA ACAGGTGAAACGGGCATGA
Upstream 100 bases:
>100_bases TTGAAGATGTGAACCCGCAACGTAATCTCGAAACGTTTTATGAAGAGTATCTGCCCATCAAAGCCGATGGCGTATTTATG CAGCAATGGCAGGGAGAATA
Downstream 100 bases:
>100_bases CGCAACTGACGTTAAAGCACGTCGGCGTCACGCTTCATAAACGCCCACTGCTCACCGATATTTCTCTAACGTGGCCTGCG GCACAGGTGAGCGGCATTAT
Product: iron chelate ABC transporter permease
Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MATFLEPLTQGRQFFQQLHLRRGLFTLALIGSLLAAMVIDLVTGAANLSPLDVLRLFLVDSSQHDELHQIIFWSIRLPMT LTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLALGTPLLASLMALLACLPIYFLGQR QGMTPQILVLSGIVVLFFFQSLQSLMLFLASPEAMQQIVFWLFGSLLKANMQGVLMTGSVLACSLVICLQQAWRLTALSA GEEQALGLGINVSALRKLAFLLATLLTAASVSFVGTIGFIGLVAPHFARMLVGEDQRYLIGISALCGSLLLVLASIISKL ILPNGVVPIGIIIALIGVPVLFYFVTKQVKRA
Sequences:
>Translated_352_residues MATFLEPLTQGRQFFQQLHLRRGLFTLALIGSLLAAMVIDLVTGAANLSPLDVLRLFLVDSSQHDELHQIIFWSIRLPMT LTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLALGTPLLASLMALLACLPIYFLGQR QGMTPQILVLSGIVVLFFFQSLQSLMLFLASPEAMQQIVFWLFGSLLKANMQGVLMTGSVLACSLVICLQQAWRLTALSA GEEQALGLGINVSALRKLAFLLATLLTAASVSFVGTIGFIGLVAPHFARMLVGEDQRYLIGISALCGSLLLVLASIISKL ILPNGVVPIGIIIALIGVPVLFYFVTKQVKRA >Mature_351_residues ATFLEPLTQGRQFFQQLHLRRGLFTLALIGSLLAAMVIDLVTGAANLSPLDVLRLFLVDSSQHDELHQIIFWSIRLPMTL TAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFGAALSIITGFSVGGVLALGTPLLASLMALLACLPIYFLGQRQ GMTPQILVLSGIVVLFFFQSLQSLMLFLASPEAMQQIVFWLFGSLLKANMQGVLMTGSVLACSLVICLQQAWRLTALSAG EEQALGLGINVSALRKLAFLLATLLTAASVSFVGTIGFIGLVAPHFARMLVGEDQRYLIGISALCGSLLLVLASIISKLI LPNGVVPIGIIIALIGVPVLFYFVTKQVKRA
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790741, Length=281, Percent_Identity=34.8754448398576, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1790740, Length=299, Percent_Identity=32.7759197324415, Blast_Score=116, Evalue=2e-27, Organism=Escherichia coli, GI1786805, Length=316, Percent_Identity=34.1772151898734, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786347, Length=288, Percent_Identity=34.7222222222222, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1788004, Length=279, Percent_Identity=30.8243727598566, Blast_Score=101, Evalue=6e-23, Organism=Escherichia coli, GI1786804, Length=333, Percent_Identity=27.027027027027, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 37262; Mature: 37130
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFLEPLTQGRQFFQQLHLRRGLFTLALIGSLLAAMVIDLVTGAANLSPLDVLRLFLVD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC SSQHDELHQIIFWSIRLPMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHH AALSIITGFSVGGVLALGTPLLASLMALLACLPIYFLGQRQGMTPQILVLSGIVVLFFFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SLQSLMLFLASPEAMQQIVFWLFGSLLKANMQGVLMTGSVLACSLVICLQQAWRLTALSA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GEEQALGLGINVSALRKLAFLLATLLTAASVSFVGTIGFIGLVAPHFARMLVGEDQRYLI CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GISALCGSLLLVLASIISKLILPNGVVPIGIIIALIGVPVLFYFVTKQVKRA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ATFLEPLTQGRQFFQQLHLRRGLFTLALIGSLLAAMVIDLVTGAANLSPLDVLRLFLVD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC SSQHDELHQIIFWSIRLPMTLTAVVVGASLGLAGLLMQTVLANPLASPYTLGISAAAGFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHH AALSIITGFSVGGVLALGTPLLASLMALLACLPIYFLGQRQGMTPQILVLSGIVVLFFFQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SLQSLMLFLASPEAMQQIVFWLFGSLLKANMQGVLMTGSVLACSLVICLQQAWRLTALSA HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC GEEQALGLGINVSALRKLAFLLATLLTAASVSFVGTIGFIGLVAPHFARMLVGEDQRYLI CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH GISALCGSLLLVLASIISKLILPNGVVPIGIIIALIGVPVLFYFVTKQVKRA HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]
Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]