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The map label for this gene is trg [H]

Identifier: 153949421

GI number: 153949421

Start: 4653065

End: 4655014

Strand: Direct

Name: trg [H]

Synonym: YpsIP31758_4122

Alternate gene names: 153949421

Gene position: 4653065-4655014 (Clockwise)

Preceding gene: 153946969

Following gene: 153948899

Centisome position: 98.51

GC content: 49.03

Gene sequence:

>1950_bases
ATGGCGGTATTTAGCAAAATTATTGGCAGCTTTGATAACGTAAAAGTCGGAAAAAAATTGGGTTTAAGTTTTTTCCTAAT
GTTGCTATTGGTCGGGGTCATTGCGGGCACCACCGCTTATCACTTCTCCGTGATCGAAGAACATGCATATAAAGTGGAGT
TGAGCTACAAAATCAACAACGAAGCGAATCAGGCAAAATATAACCGCGCACTTTATGAACGTACCTATGACCTGAAATAC
ATCACAGAAAACACACAGCACATCAATAATATAAAAAATTTACTGACCCAAAGTGCAAATCTCCGCTGGTCAGTTGATAA
CCGCAAAAATATTGCCAACATTAATCATGTCGTTGAGGAGTACCAGCAACAACAGACGAACTTTGTGAATGCGGTGACCA
ATAAAGATAAAGTGCGTCAAAGCTGGAGCATCTCTGAAAGCCTAAATAATATCAATGCACTACAGCAAAGCCTGCTTAAT
GAAGGGGCCGATACCAATACGCAGATATTGCTAGCAGAAATGAGCCAAAAATTAATGACGGTGCGTTACAACGCGCGCGG
TTTATTACTGGATCGCAATAAAGATGCCGAAACTGCACTGATAACCTCAATTAACATTGCCAACAGTGCCGCGAATGCTT
TCATGCCTGTGTTATCTGCCGAGCAGCAGAAACTATTAGCACCGGTTGCCGCTAACCTAGCCCTCTATAAAGACAACGTT
CTGGCCTATTTACCGGCTTATCAGCAAGAACTGGAGGTCGGTAAAGTGATGGAGGCCAGTGCGAATGCATTGAATACGTT
GGCCACCCAACTGTTTACCCAAGAGTTGCAAGGTACGCACAACGAGATTAACAATGCCCAGTACCAACTCGCTATTGCGG
CTTTTGTGGCCTTACTTTTGGGGCTATTGATCGCCTGGCGCATGACCCGTCAAATTACCGTGCCTCTACGTGCCACACTG
GATATGGCAGAACGTATTGCCACTGGCGATTTAACCGCGGCAACCACATCATCCCGTACCGACGAACTGGGCATGTTGAT
GAATGCCGTCGCCCGCATGAATGAAAATCTGCGTGCCATGATTGATGAAATCCGCATTGGTGTCAGCCAGGTATCCCATG
CCTCTGGTGAGATTGCCGCTGGCAATACTGATTTATCGTCCCGTACCGAGCAACAAGCCGCCGCCGTAGAAGAAACCGCC
GCCAGCATGGAACAATTAAACGCCACAGTAAAACAGAACACGGATAACGCTCATCACGCCAATCAATTGGCCACCGAGGC
CTCGCAGACCGCACAACAGGGCGGTAAGCTGGTCAATGATGTAGTGCGCACCATGAATGATATCTCTGGCAGTTCCAAAC
GTATTTCTGAAATCACCTCCGTGATTAACAGCATCGCTTTCCAGACCAATATTTTGGCGCTGAATGCCGCCGTTGAAGCG
GCCCGGGCGGGTGAACAAGGCCGTGGTTTTGCGGTAGTCGCCAGTGAGGTCAGAAATCTGGCGCAACGTAGTGCGCAGGC
TGCTAAAGAAATTGAAGGGCTGATTGGCGAGTCTGTTTCTCAGGTTAATGCCGGAACATCGCTGGTGAAAAATGCCGGTA
ACACCATGGAGGAGATTGTCCGCTCCGTGAGCCACGTGCGCGATATCATGGCGGAAATCGCCTCAGCATCTGATGAACAA
AGCCGTGGTATCACCCAAGTTAGCTTGGCTATCTCAGAAATGGACAGTACCACACAGCAAAATGCGGCCTTGGTGGAAGA
ATCCGCCGCCGCCGCTGACTCACTGGCTGAGCAGGCCATCTTGCTGGCTCAGGCTGTGGCGGTGTTTCGGCTATCTGAAG
ATGAAGGCGCGACAGATGAAGGCCGTGTTGTGACGCCAAAAGCCTCTAACGGGCGTCATACGCCAGAAGACCATCGGATC
AACCAGCAGAAGAGCTGGGAAACGTTCTAA

Upstream 100 bases:

>100_bases
GCGTACATACCAGTCCTTTAACTTCTCTAATAATTAGACCTTACCAAACTCACCTACGCTGATTAATTCATATCAGAAAC
ACCGTATAACGGAGAAGAAC

Downstream 100 bases:

>100_bases
TCCCTCAATATTGGCAGGAATAGCCACAACGGTTATTTCTGCCATCCTCAGAAATAATTGGCGATAAATAGGTTTCTCGT
TTTCAGGGAATTTCTTCGAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: MCP-III; Ribose and galactose chemoreceptor protein [H]

Number of amino acids: Translated: 649; Mature: 648

Protein sequence:

>649_residues
MAVFSKIIGSFDNVKVGKKLGLSFFLMLLLVGVIAGTTAYHFSVIEEHAYKVELSYKINNEANQAKYNRALYERTYDLKY
ITENTQHINNIKNLLTQSANLRWSVDNRKNIANINHVVEEYQQQQTNFVNAVTNKDKVRQSWSISESLNNINALQQSLLN
EGADTNTQILLAEMSQKLMTVRYNARGLLLDRNKDAETALITSINIANSAANAFMPVLSAEQQKLLAPVAANLALYKDNV
LAYLPAYQQELEVGKVMEASANALNTLATQLFTQELQGTHNEINNAQYQLAIAAFVALLLGLLIAWRMTRQITVPLRATL
DMAERIATGDLTAATTSSRTDELGMLMNAVARMNENLRAMIDEIRIGVSQVSHASGEIAAGNTDLSSRTEQQAAAVEETA
ASMEQLNATVKQNTDNAHHANQLATEASQTAQQGGKLVNDVVRTMNDISGSSKRISEITSVINSIAFQTNILALNAAVEA
ARAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAGNTMEEIVRSVSHVRDIMAEIASASDEQ
SRGITQVSLAISEMDSTTQQNAALVEESAAAADSLAEQAILLAQAVAVFRLSEDEGATDEGRVVTPKASNGRHTPEDHRI
NQQKSWETF

Sequences:

>Translated_649_residues
MAVFSKIIGSFDNVKVGKKLGLSFFLMLLLVGVIAGTTAYHFSVIEEHAYKVELSYKINNEANQAKYNRALYERTYDLKY
ITENTQHINNIKNLLTQSANLRWSVDNRKNIANINHVVEEYQQQQTNFVNAVTNKDKVRQSWSISESLNNINALQQSLLN
EGADTNTQILLAEMSQKLMTVRYNARGLLLDRNKDAETALITSINIANSAANAFMPVLSAEQQKLLAPVAANLALYKDNV
LAYLPAYQQELEVGKVMEASANALNTLATQLFTQELQGTHNEINNAQYQLAIAAFVALLLGLLIAWRMTRQITVPLRATL
DMAERIATGDLTAATTSSRTDELGMLMNAVARMNENLRAMIDEIRIGVSQVSHASGEIAAGNTDLSSRTEQQAAAVEETA
ASMEQLNATVKQNTDNAHHANQLATEASQTAQQGGKLVNDVVRTMNDISGSSKRISEITSVINSIAFQTNILALNAAVEA
ARAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAGNTMEEIVRSVSHVRDIMAEIASASDEQ
SRGITQVSLAISEMDSTTQQNAALVEESAAAADSLAEQAILLAQAVAVFRLSEDEGATDEGRVVTPKASNGRHTPEDHRI
NQQKSWETF
>Mature_648_residues
AVFSKIIGSFDNVKVGKKLGLSFFLMLLLVGVIAGTTAYHFSVIEEHAYKVELSYKINNEANQAKYNRALYERTYDLKYI
TENTQHINNIKNLLTQSANLRWSVDNRKNIANINHVVEEYQQQQTNFVNAVTNKDKVRQSWSISESLNNINALQQSLLNE
GADTNTQILLAEMSQKLMTVRYNARGLLLDRNKDAETALITSINIANSAANAFMPVLSAEQQKLLAPVAANLALYKDNVL
AYLPAYQQELEVGKVMEASANALNTLATQLFTQELQGTHNEINNAQYQLAIAAFVALLLGLLIAWRMTRQITVPLRATLD
MAERIATGDLTAATTSSRTDELGMLMNAVARMNENLRAMIDEIRIGVSQVSHASGEIAAGNTDLSSRTEQQAAAVEETAA
SMEQLNATVKQNTDNAHHANQLATEASQTAQQGGKLVNDVVRTMNDISGSSKRISEITSVINSIAFQTNILALNAAVEAA
RAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAGNTMEEIVRSVSHVRDIMAEIASASDEQS
RGITQVSLAISEMDSTTQQNAALVEESAAAADSLAEQAILLAQAVAVFRLSEDEGATDEGRVVTPKASNGRHTPEDHRIN
QQKSWETF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=321, Percent_Identity=61.993769470405, Blast_Score=353, Evalue=1e-98,
Organism=Escherichia coli, GI1788195, Length=347, Percent_Identity=57.0605187319885, Blast_Score=331, Evalue=7e-92,
Organism=Escherichia coli, GI2367378, Length=373, Percent_Identity=54.1554959785523, Blast_Score=328, Evalue=7e-91,
Organism=Escherichia coli, GI1788194, Length=338, Percent_Identity=52.9585798816568, Blast_Score=307, Evalue=1e-84,
Organism=Escherichia coli, GI1789453, Length=318, Percent_Identity=43.3962264150943, Blast_Score=238, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 70553; Mature: 70422

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFSKIIGSFDNVKVGKKLGLSFFLMLLLVGVIAGTTAYHFSVIEEHAYKVELSYKINN
CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECC
EANQAKYNRALYERTYDLKYITENTQHINNIKNLLTQSANLRWSVDNRKNIANINHVVEE
CHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
YQQQQTNFVNAVTNKDKVRQSWSISESLNNINALQQSLLNEGADTNTQILLAEMSQKLMT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE
VRYNARGLLLDRNKDAETALITSINIANSAANAFMPVLSAEQQKLLAPVAANLALYKDNV
EEECCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LAYLPAYQQELEVGKVMEASANALNTLATQLFTQELQGTHNEINNAQYQLAIAAFVALLL
HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH
GLLIAWRMTRQITVPLRATLDMAERIATGDLTAATTSSRTDELGMLMNAVARMNENLRAM
HHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHH
IDEIRIGVSQVSHASGEIAAGNTDLSSRTEQQAAAVEETAASMEQLNATVKQNTDNAHHA
HHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
NQLATEASQTAQQGGKLVNDVVRTMNDISGSSKRISEITSVINSIAFQTNILALNAAVEA
HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAGNTMEEIV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSVSHVRDIMAEIASASDEQSRGITQVSLAISEMDSTTQQNAALVEESAAAADSLAEQAI
HHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAQAVAVFRLSEDEGATDEGRVVTPKASNGRHTPEDHRINQQKSWETF
HHHHHHHHHEECCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCC
>Mature Secondary Structure 
AVFSKIIGSFDNVKVGKKLGLSFFLMLLLVGVIAGTTAYHFSVIEEHAYKVELSYKINN
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEEEEECC
EANQAKYNRALYERTYDLKYITENTQHINNIKNLLTQSANLRWSVDNRKNIANINHVVEE
CHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHH
YQQQQTNFVNAVTNKDKVRQSWSISESLNNINALQQSLLNEGADTNTQILLAEMSQKLMT
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHE
VRYNARGLLLDRNKDAETALITSINIANSAANAFMPVLSAEQQKLLAPVAANLALYKDNV
EEECCCEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LAYLPAYQQELEVGKVMEASANALNTLATQLFTQELQGTHNEINNAQYQLAIAAFVALLL
HEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHH
GLLIAWRMTRQITVPLRATLDMAERIATGDLTAATTSSRTDELGMLMNAVARMNENLRAM
HHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHH
IDEIRIGVSQVSHASGEIAAGNTDLSSRTEQQAAAVEETAASMEQLNATVKQNTDNAHHA
HHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
NQLATEASQTAQQGGKLVNDVVRTMNDISGSSKRISEITSVINSIAFQTNILALNAAVEA
HHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARAGEQGRGFAVVASEVRNLAQRSAQAAKEIEGLIGESVSQVNAGTSLVKNAGNTMEEIV
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
RSVSHVRDIMAEIASASDEQSRGITQVSLAISEMDSTTQQNAALVEESAAAADSLAEQAI
HHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLAQAVAVFRLSEDEGATDEGRVVTPKASNGRHTPEDHRINQQKSWETF
HHHHHHHHHEECCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 6374654; 9097039; 9278503 [H]