| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948899
Identifier: 153948899
GI number: 153948899
Start: 4655152
End: 4655535
Strand: Direct
Name: 153948899
Synonym: YpsIP31758_4123
Alternate gene names: NA
Gene position: 4655152-4655535 (Clockwise)
Preceding gene: 153949421
Following gene: 153948821
Centisome position: 98.56
GC content: 36.98
Gene sequence:
>384_bases ATGAACGCCGATCTTCATGTAGTAGGTAATAGCTTTGGTGTAATCAAACACCATGCGGTTAAAAAGATAACCCCCATTGC TCAACGGACGGTCGATAGTATGAAAAAAATAATATTCTTTATCATGCCATTTTTTATTTTACTGGGGTATTCTCATGCCG CTGAAAAATATCCGGCAGATATCACGGCCTATTTAAACGTAGCAGATGACTGCCAATATTTCTCTGGCGAGTGGGACTCA ACGCTGCCTAAAGAACGACAGATTGAAATAGAAAAAAAAGTGAATGTCACGTGTAGCAAAGCACGTAGTTTGCAAGAAAA ATTAAGCGTTAAATACAAAAAAAGACAGGATCTTTTAGACGTTATTAATGATTATGATTTCTAG
Upstream 100 bases:
>100_bases TCTGCCATCCTCAGAAATAATTGGCGATAAATAGGTTTCTCGTTTTCAGGGAATTTCTTCGACCCAAACATTGAGTTCAA CATCCAATAAAAAAGATGGT
Downstream 100 bases:
>100_bases CGGATACTGACGGTTTCTGTATCAAAAACATCCAGTACACGCACAGCCTGTGCTGCCAGATACATACCCTCTTGGCTACC CAAAGCGAGATAGAGTATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNADLHVVGNSFGVIKHHAVKKITPIAQRTVDSMKKIIFFIMPFFILLGYSHAAEKYPADITAYLNVADDCQYFSGEWDS TLPKERQIEIEKKVNVTCSKARSLQEKLSVKYKKRQDLLDVINDYDF
Sequences:
>Translated_127_residues MNADLHVVGNSFGVIKHHAVKKITPIAQRTVDSMKKIIFFIMPFFILLGYSHAAEKYPADITAYLNVADDCQYFSGEWDS TLPKERQIEIEKKVNVTCSKARSLQEKLSVKYKKRQDLLDVINDYDF >Mature_127_residues MNADLHVVGNSFGVIKHHAVKKITPIAQRTVDSMKKIIFFIMPFFILLGYSHAAEKYPADITAYLNVADDCQYFSGEWDS TLPKERQIEIEKKVNVTCSKARSLQEKLSVKYKKRQDLLDVINDYDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14631; Mature: 14631
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADLHVVGNSFGVIKHHAVKKITPIAQRTVDSMKKIIFFIMPFFILLGYSHAAEKYPAD CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC ITAYLNVADDCQYFSGEWDSTLPKERQIEIEKKVNVTCSKARSLQEKLSVKYKKRQDLLD HHHEECHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VINDYDF HHHCCCC >Mature Secondary Structure MNADLHVVGNSFGVIKHHAVKKITPIAQRTVDSMKKIIFFIMPFFILLGYSHAAEKYPAD CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC ITAYLNVADDCQYFSGEWDSTLPKERQIEIEKKVNVTCSKARSLQEKLSVKYKKRQDLLD HHHEECHHHHHHHCCCCCCCCCCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH VINDYDF HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA