| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949385
Identifier: 153949385
GI number: 153949385
Start: 4217285
End: 4217866
Strand: Reverse
Name: 153949385
Synonym: YpsIP31758_3745
Alternate gene names: NA
Gene position: 4217866-4217285 (Counterclockwise)
Preceding gene: 153948935
Following gene: 153947878
Centisome position: 89.3
GC content: 50.86
Gene sequence:
>582_bases GTGAACCAGAGTTTATCGCAGGCAACGAATGCCATATTGGCACACCTATTGATGGATCTGAAATCTGGCAACATTCGCCG TTGTGAGTCACTGGGAATGACGATTGAAGAGGTTCGTCAACTGAGCCAACTGACCATTGACGACCTGCACTACCTGATGC AGAGCAGTGTGTCGGTACTGAATCTGAGCATTAATCATACTAATTTTTGGATCATTGTGCAGCAGGCTCGTATTGAGCAG CAGCGCATGCAACGTATTGATCGCGCTCTGGAATTGGGGGGATCTATCGAACTGATGCAAACCTATTTCGGCCTGACCAC GGCAGAAGTCAGCGCCCGGCGTCGGCTCAATGATATTGATACTCGTCAGGGCAGAACTCAGGCGCTCAACGAACAAGAAG ATGCTGATATCTGGACTCAGTGGAGAGCTTCAGGCTTGAGTGCCGCCGATTCTCACGAGGCGCTAGACGTTATGATGCTT GCCGCTGAACAACATGATGTCTCGCTGACGGCTGTTTGGTCACGGGTTAGCAACTGGTGTCGTGAAGCCAGTCGTAAGAC CAATAAGAGGGAAGACGGCTGA
Upstream 100 bases:
>100_bases ACGATATCCATCTGGTCAAAATAATGCGTCTTATGCGCGTATTGCGCCGCCTGCGCCAGTTACAGCGTGATGCGAATGTA GCCATTAACGGAGGTTTACT
Downstream 100 bases:
>100_bases TGAATATTTCGTATTACAGCCCTCGACAGGGGGTGACTCCTTCTATTCGGCGAAAAGCTGACAGTCTGATGGCTGCCCTC AAGCATGGGAAGAAAGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MNQSLSQATNAILAHLLMDLKSGNIRRCESLGMTIEEVRQLSQLTIDDLHYLMQSSVSVLNLSINHTNFWIIVQQARIEQ QRMQRIDRALELGGSIELMQTYFGLTTAEVSARRRLNDIDTRQGRTQALNEQEDADIWTQWRASGLSAADSHEALDVMML AAEQHDVSLTAVWSRVSNWCREASRKTNKREDG
Sequences:
>Translated_193_residues MNQSLSQATNAILAHLLMDLKSGNIRRCESLGMTIEEVRQLSQLTIDDLHYLMQSSVSVLNLSINHTNFWIIVQQARIEQ QRMQRIDRALELGGSIELMQTYFGLTTAEVSARRRLNDIDTRQGRTQALNEQEDADIWTQWRASGLSAADSHEALDVMML AAEQHDVSLTAVWSRVSNWCREASRKTNKREDG >Mature_193_residues MNQSLSQATNAILAHLLMDLKSGNIRRCESLGMTIEEVRQLSQLTIDDLHYLMQSSVSVLNLSINHTNFWIIVQQARIEQ QRMQRIDRALELGGSIELMQTYFGLTTAEVSARRRLNDIDTRQGRTQALNEQEDADIWTQWRASGLSAADSHEALDVMML AAEQHDVSLTAVWSRVSNWCREASRKTNKREDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21987; Mature: 21987
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQSLSQATNAILAHLLMDLKSGNIRRCESLGMTIEEVRQLSQLTIDDLHYLMQSSVSVL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHE NLSINHTNFWIIVQQARIEQQRMQRIDRALELGGSIELMQTYFGLTTAEVSARRRLNDID EEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH TRQGRTQALNEQEDADIWTQWRASGLSAADSHEALDVMMLAAEQHDVSLTAVWSRVSNWC HCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH REASRKTNKREDG HHHHHHCCCCCCC >Mature Secondary Structure MNQSLSQATNAILAHLLMDLKSGNIRRCESLGMTIEEVRQLSQLTIDDLHYLMQSSVSVL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHE NLSINHTNFWIIVQQARIEQQRMQRIDRALELGGSIELMQTYFGLTTAEVSARRRLNDID EEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHH TRQGRTQALNEQEDADIWTQWRASGLSAADSHEALDVMMLAAEQHDVSLTAVWSRVSNWC HCCCHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH REASRKTNKREDG HHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA