| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948935
Identifier: 153948935
GI number: 153948935
Start: 4217863
End: 4219509
Strand: Reverse
Name: 153948935
Synonym: YpsIP31758_3746
Alternate gene names: NA
Gene position: 4219509-4217863 (Counterclockwise)
Preceding gene: 153948863
Following gene: 153949385
Centisome position: 89.33
GC content: 50.03
Gene sequence:
>1647_bases ATGCTGCAGCGCGGTAGACTGCCCCACTCAGTCGGGCACCCAACGGCTCTACCGGTTAGCGAAATGGCCATGGTGCTGAC GTTGGATCAACTACGGCCAAATCCAGATAACCCACGGGCTACACGTAATCCAAAATTTGAGGATATTAAGGCGTCAATAC GTTCTCGTGGCTTGGATTCAATTCCCAAGGTGACACGGGATCCCGATGGTGAGGATGCCTATATCTTCAGTGATGGCGGT AATACCCGCTACCAGATTTTGTGCGAATTATGGCAGGAAACTGGAGATGATCGCTTTTATCACATTCACTCGATTTTCAA ACCATGGCCGGGGCGATTGCAGTGTGTTATTGGTCATCTGGCAGAAAATGAAATCCGGGGCGATCTCACATACATCGAGA AGGCGCTAGGTATTCACAAGGCTCGTATCCTGTGGGAAGAACAGCAGGGGAGAGGTGTCTCACTCCGTGAATTATCCGAA TTTCTGAATCAGCAGGGCTATCCCATTCATAACTCCAGTATCAGCCGCATGGAAGATACGCTGAAATATCTGTATCCGTG TCTGCCTGATTTACTCGATGCTGGGTTGAGCCGATCGCAAGTCATCCCGTTAATCACATTACGATCAGCCGCAGAAAAAA TGTGGTCTCGGCATGTTGTTGCGACGGATTGCAGCAAGACATTTGAGGCGGTTTTTAGCGCGGTTTGTACATCATTTAAC TGCCCTGATTTGTACTCTTTGGATATGTTCCGTGATGAGTTGATAGGTGAACTCCTTAAAGCGTTACCCCATCCGTTGTT GAACTACGACCGCTGGCTGATTGAGCTTGATCCTAAAGAACAGCAGCGCCGGGAGCTTTATGGTGACCCATTACCTCCCC CTTCAGCGTTGACTCCAGATGCTAATTCAGTAGGAATTTCTGGCGCTCCACTCACCAAATTGCCGCCACAACCTAACGGA GCCGTTCCTGAGGTCGGACTGCGTTCAGGGACACTCACTGGGCCTTTAACGAAGCCTGAATCCGCGCCTGATAATCGTGG TGATACCTCGGTTAATCGCCCTCAGGAGCATCTTGCCAATATTAAAACCCCGCCGAATCTCTGTGGTGGCCCCGTTATTA TCAGCGGTAATGCGAATCTCGCTGGAGCGAATCTGCTTTCTACGGTGGTGGATGAGTCGGCAGGCAAGGATCAATCTCCA GCGTCTTCGGTTGCTTTTGCAGCGACAGGCCTGGAGCCAGTCGATGATATCTGGCACATCCCTGCGTTGATGGATGATGT TGAACACTTGCAAGATATGGCTTACCGATTGGCTTTTGAACTGTCGGAGGCCATGGGCTGTGCTGACAGTATTGCTGAAT ATAAACAGCGTGATTCAGCTGGTTATAGCACTCTGGCGGATAGTACTCAGAAAGGTAATACCAATAGATTCGTAACTTTC CTGCTGGGTCTGACGGGGCATTCGGGCCAAGAAAGCATAAGCCTGTCCATTTTTTGCCAAACCTTTTTAGGTTCAGCCGA CCAATCCGATCCCCCGGTACTCGACGATATCCATCTGGTCAAAATAATGCGTCTTATGCGCGTATTGCGCCGCCTGCGCC AGTTACAGCGTGATGCGAATGTAGCCATTAACGGAGGTTTACTGTGA
Upstream 100 bases:
>100_bases GTCAGAGTGAGGTTTGACAGCCGTTACACCCGTTTCGACGATATCAAGAGTTGGGGGCCTGCTGATGAGTAAAATCAATG GGTTAAATCTGTCAGAGGCG
Downstream 100 bases:
>100_bases ACCAGAGTTTATCGCAGGCAACGAATGCCATATTGGCACACCTATTGATGGATCTGAAATCTGGCAACATTCGCCGTTGT GAGTCACTGGGAATGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MLQRGRLPHSVGHPTALPVSEMAMVLTLDQLRPNPDNPRATRNPKFEDIKASIRSRGLDSIPKVTRDPDGEDAYIFSDGG NTRYQILCELWQETGDDRFYHIHSIFKPWPGRLQCVIGHLAENEIRGDLTYIEKALGIHKARILWEEQQGRGVSLRELSE FLNQQGYPIHNSSISRMEDTLKYLYPCLPDLLDAGLSRSQVIPLITLRSAAEKMWSRHVVATDCSKTFEAVFSAVCTSFN CPDLYSLDMFRDELIGELLKALPHPLLNYDRWLIELDPKEQQRRELYGDPLPPPSALTPDANSVGISGAPLTKLPPQPNG AVPEVGLRSGTLTGPLTKPESAPDNRGDTSVNRPQEHLANIKTPPNLCGGPVIISGNANLAGANLLSTVVDESAGKDQSP ASSVAFAATGLEPVDDIWHIPALMDDVEHLQDMAYRLAFELSEAMGCADSIAEYKQRDSAGYSTLADSTQKGNTNRFVTF LLGLTGHSGQESISLSIFCQTFLGSADQSDPPVLDDIHLVKIMRLMRVLRRLRQLQRDANVAINGGLL
Sequences:
>Translated_548_residues MLQRGRLPHSVGHPTALPVSEMAMVLTLDQLRPNPDNPRATRNPKFEDIKASIRSRGLDSIPKVTRDPDGEDAYIFSDGG NTRYQILCELWQETGDDRFYHIHSIFKPWPGRLQCVIGHLAENEIRGDLTYIEKALGIHKARILWEEQQGRGVSLRELSE FLNQQGYPIHNSSISRMEDTLKYLYPCLPDLLDAGLSRSQVIPLITLRSAAEKMWSRHVVATDCSKTFEAVFSAVCTSFN CPDLYSLDMFRDELIGELLKALPHPLLNYDRWLIELDPKEQQRRELYGDPLPPPSALTPDANSVGISGAPLTKLPPQPNG AVPEVGLRSGTLTGPLTKPESAPDNRGDTSVNRPQEHLANIKTPPNLCGGPVIISGNANLAGANLLSTVVDESAGKDQSP ASSVAFAATGLEPVDDIWHIPALMDDVEHLQDMAYRLAFELSEAMGCADSIAEYKQRDSAGYSTLADSTQKGNTNRFVTF LLGLTGHSGQESISLSIFCQTFLGSADQSDPPVLDDIHLVKIMRLMRVLRRLRQLQRDANVAINGGLL >Mature_548_residues MLQRGRLPHSVGHPTALPVSEMAMVLTLDQLRPNPDNPRATRNPKFEDIKASIRSRGLDSIPKVTRDPDGEDAYIFSDGG NTRYQILCELWQETGDDRFYHIHSIFKPWPGRLQCVIGHLAENEIRGDLTYIEKALGIHKARILWEEQQGRGVSLRELSE FLNQQGYPIHNSSISRMEDTLKYLYPCLPDLLDAGLSRSQVIPLITLRSAAEKMWSRHVVATDCSKTFEAVFSAVCTSFN CPDLYSLDMFRDELIGELLKALPHPLLNYDRWLIELDPKEQQRRELYGDPLPPPSALTPDANSVGISGAPLTKLPPQPNG AVPEVGLRSGTLTGPLTKPESAPDNRGDTSVNRPQEHLANIKTPPNLCGGPVIISGNANLAGANLLSTVVDESAGKDQSP ASSVAFAATGLEPVDDIWHIPALMDDVEHLQDMAYRLAFELSEAMGCADSIAEYKQRDSAGYSTLADSTQKGNTNRFVTF LLGLTGHSGQESISLSIFCQTFLGSADQSDPPVLDDIHLVKIMRLMRVLRRLRQLQRDANVAINGGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60427; Mature: 60427
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQRGRLPHSVGHPTALPVSEMAMVLTLDQLRPNPDNPRATRNPKFEDIKASIRSRGLDS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC IPKVTRDPDGEDAYIFSDGGNTRYQILCELWQETGDDRFYHIHSIFKPWPGRLQCVIGHL CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHHH AENEIRGDLTYIEKALGIHKARILWEEQQGRGVSLRELSEFLNQQGYPIHNSSISRMEDT HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH LKYLYPCLPDLLDAGLSRSQVIPLITLRSAAEKMWSRHVVATDCSKTFEAVFSAVCTSFN HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC CPDLYSLDMFRDELIGELLKALPHPLLNYDRWLIELDPKEQQRRELYGDPLPPPSALTPD CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCC ANSVGISGAPLTKLPPQPNGAVPEVGLRSGTLTGPLTKPESAPDNRGDTSVNRPQEHLAN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC IKTPPNLCGGPVIISGNANLAGANLLSTVVDESAGKDQSPASSVAFAATGLEPVDDIWHI CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHH PALMDDVEHLQDMAYRLAFELSEAMGCADSIAEYKQRDSAGYSTLADSTQKGNTNRFVTF HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHEEEE LLGLTGHSGQESISLSIFCQTFLGSADQSDPPVLDDIHLVKIMRLMRVLRRLRQLQRDAN EEECCCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VAINGGLL EEECCCCC >Mature Secondary Structure MLQRGRLPHSVGHPTALPVSEMAMVLTLDQLRPNPDNPRATRNPKFEDIKASIRSRGLDS CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCC IPKVTRDPDGEDAYIFSDGGNTRYQILCELWQETGDDRFYHIHSIFKPWPGRLQCVIGHL CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEHHHHHCCCCCHHHHHHHHH AENEIRGDLTYIEKALGIHKARILWEEQQGRGVSLRELSEFLNQQGYPIHNSSISRMEDT HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHH LKYLYPCLPDLLDAGLSRSQVIPLITLRSAAEKMWSRHVVATDCSKTFEAVFSAVCTSFN HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC CPDLYSLDMFRDELIGELLKALPHPLLNYDRWLIELDPKEQQRRELYGDPLPPPSALTPD CCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCC ANSVGISGAPLTKLPPQPNGAVPEVGLRSGTLTGPLTKPESAPDNRGDTSVNRPQEHLAN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC IKTPPNLCGGPVIISGNANLAGANLLSTVVDESAGKDQSPASSVAFAATGLEPVDDIWHI CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHH PALMDDVEHLQDMAYRLAFELSEAMGCADSIAEYKQRDSAGYSTLADSTQKGNTNRFVTF HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHEEEE LLGLTGHSGQESISLSIFCQTFLGSADQSDPPVLDDIHLVKIMRLMRVLRRLRQLQRDAN EEECCCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VAINGGLL EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA