| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is gntP [C]
Identifier: 153948844
GI number: 153948844
Start: 4561389
End: 4562657
Strand: Direct
Name: gntP [C]
Synonym: YpsIP31758_4051
Alternate gene names: 153948844
Gene position: 4561389-4562657 (Clockwise)
Preceding gene: 153949252
Following gene: 153949377
Centisome position: 96.57
GC content: 54.45
Gene sequence:
>1269_bases ATGACCACAGTTTCTGCTCTGGGCGCATTAGTGGCACTGATCGTGTCCATCGTCCTAATTTTACGCAAAGTGCCGCCTGC TTACGGCATGATCGCGGGAGCGTTAGCGGGCGGCTTAGTCGGCGGTGCCGATCTGATTCAAACCATTAACCTCATGATTA CGGGCGCTCAAGGCATCACTAACGCTGTGCTACGTATTCTTGCTGCCGGTATTCTGGCAGGCGTGCTGATTGAGTCTGGT GCGGCAAATACCATCGCCGAAACCATTGTACGAAAAGTCGGCGAAAAACGCGCCCTATTGGCACTGGCGGTTGCGACGAT GCTGCTGACAGCGGTCGGGGTGTTTATCGATGTCGCGGTCATTACCGTTTCCCCAATCGCTCTGGCCATTGCGCACCGTG CGGATATTTCCAAAATGGCCATTTTACTGGCGATGGTCGGCGGCGGCAAAGCGGGTAACGTGATGTCACCCAACCCGAAC ACCATCGCAGCGGCAGACAGTTTTCATGTGCCGTTAACCTCATTGATGATTGCCGGTATTGTCCCCGGTTTGTTCGGCTT GGCGTTGGCCTATTTTATGGCAAAACGCCTAAAGCATCGTGGTTCCAAAGTCGAAGCACATGAGTTGGTAGTCAGTAAAA ATGATACTGCGCTGCCCGCCTTTGGTGCGGCCATGGCGGCTCCTCTGGTTGCCATCTTCCTATTGGCATTACGCCCTCTG GCTGGCATTGCTATTGACCCCCTGGTGGCTTTGCCGGTCGGCGGTTTGATGGGTGTCGTTGTCATGGGGCAATGGCGTCA CACCAACCAATATATGGTTTCTGGCCTGTCACGTATGGCACCTGTGGCTATTATGCTATTAGGTACCGGTACATTGGCGG GCATTATCGCCAACTCAGGTTTAAAAGATGTTTTGATTAGCGGCTTGAGCGCATCGGGTATGCCTTCTTATCTGCTGGCC CCCATTTCAGGTGCACTGATGTCAATGGCGACCGCCTCAACCACGGCGGGCACCGCAGTCGCTTCTGCGGTATTTAGCTC AACGCTTATCGGAATGGGTATCTCAGCGCTGGCCGGAGCCGCGATGGTCCACGCAGGTGCCACGGTGCTCGATCACATGC CGCACGGTAGCTTCTTCCATGCCACTGGCGGTAGCGTCAACATGCAGGTACATGAACGCCTAAAACTGCTGCCCTATGAG ACCGCCGTGGGTTTGATGATCGCCTTTGTCTCTACGCTGATGTTTGGCGTGTTTAATTTAGCGGGTTAA
Upstream 100 bases:
>100_bases CCACCATAATGGCGACGTTGTTCTTGATCGCGACGTACCCTACTGCCGCGCAGATCTTCTCTAAGCGGCCAAAATAGAAT AATGAAAGCGGGAGTCATAT
Downstream 100 bases:
>100_bases AGAGGTACGCATGAAAATTATTATTGCTCCCGATTCATTTAAAGAAAGCCTCACCGCCATGCAGGTTGCCGAGGCCATTG AGCAAGGCTTCAGCGAGATT
Product: gluconate:H+ symporter (GntP) family protein
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MTTVSALGALVALIVSIVLILRKVPPAYGMIAGALAGGLVGGADLIQTINLMITGAQGITNAVLRILAAGILAGVLIESG AANTIAETIVRKVGEKRALLALAVATMLLTAVGVFIDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPN TIAAADSFHVPLTSLMIAGIVPGLFGLALAYFMAKRLKHRGSKVEAHELVVSKNDTALPAFGAAMAAPLVAIFLLALRPL AGIAIDPLVALPVGGLMGVVVMGQWRHTNQYMVSGLSRMAPVAIMLLGTGTLAGIIANSGLKDVLISGLSASGMPSYLLA PISGALMSMATASTTAGTAVASAVFSSTLIGMGISALAGAAMVHAGATVLDHMPHGSFFHATGGSVNMQVHERLKLLPYE TAVGLMIAFVSTLMFGVFNLAG
Sequences:
>Translated_422_residues MTTVSALGALVALIVSIVLILRKVPPAYGMIAGALAGGLVGGADLIQTINLMITGAQGITNAVLRILAAGILAGVLIESG AANTIAETIVRKVGEKRALLALAVATMLLTAVGVFIDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPN TIAAADSFHVPLTSLMIAGIVPGLFGLALAYFMAKRLKHRGSKVEAHELVVSKNDTALPAFGAAMAAPLVAIFLLALRPL AGIAIDPLVALPVGGLMGVVVMGQWRHTNQYMVSGLSRMAPVAIMLLGTGTLAGIIANSGLKDVLISGLSASGMPSYLLA PISGALMSMATASTTAGTAVASAVFSSTLIGMGISALAGAAMVHAGATVLDHMPHGSFFHATGGSVNMQVHERLKLLPYE TAVGLMIAFVSTLMFGVFNLAG >Mature_421_residues TTVSALGALVALIVSIVLILRKVPPAYGMIAGALAGGLVGGADLIQTINLMITGAQGITNAVLRILAAGILAGVLIESGA ANTIAETIVRKVGEKRALLALAVATMLLTAVGVFIDVAVITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNT IAAADSFHVPLTSLMIAGIVPGLFGLALAYFMAKRLKHRGSKVEAHELVVSKNDTALPAFGAAMAAPLVAIFLLALRPLA GIAIDPLVALPVGGLMGVVVMGQWRHTNQYMVSGLSRMAPVAIMLLGTGTLAGIIANSGLKDVLISGLSASGMPSYLLAP ISGALMSMATASTTAGTAVASAVFSSTLIGMGISALAGAAMVHAGATVLDHMPHGSFFHATGGSVNMQVHERLKLLPYET AVGLMIAFVSTLMFGVFNLAG
Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Escherichia coli, GI1790776, Length=429, Percent_Identity=22.8438228438228, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789097, Length=153, Percent_Identity=33.9869281045752, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 42549; Mature: 42417
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVSALGALVALIVSIVLILRKVPPAYGMIAGALAGGLVGGADLIQTINLMITGAQGIT CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCHHHH NAVLRILAAGILAGVLIESGAANTIAETIVRKVGEKRALLALAVATMLLTAVGVFIDVAV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIAAADSFHVPLTSLMIAGI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH VPGLFGLALAYFMAKRLKHRGSKVEAHELVVSKNDTALPAFGAAMAAPLVAIFLLALRPL HHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH AGIAIDPLVALPVGGLMGVVVMGQWRHTNQYMVSGLSRMAPVAIMLLGTGTLAGIIANSG CCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC LKDVLISGLSASGMPSYLLAPISGALMSMATASTTAGTAVASAVFSSTLIGMGISALAGA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH AMVHAGATVLDHMPHGSFFHATGGSVNMQVHERLKLLPYETAVGLMIAFVSTLMFGVFNL HHHHHCHHHHHCCCCCCEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC AG CC >Mature Secondary Structure TTVSALGALVALIVSIVLILRKVPPAYGMIAGALAGGLVGGADLIQTINLMITGAQGIT CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEECCHHHH NAVLRILAAGILAGVLIESGAANTIAETIVRKVGEKRALLALAVATMLLTAVGVFIDVAV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ITVSPIALAIAHRADISKMAILLAMVGGGKAGNVMSPNPNTIAAADSFHVPLTSLMIAGI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHH VPGLFGLALAYFMAKRLKHRGSKVEAHELVVSKNDTALPAFGAAMAAPLVAIFLLALRPL HHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHH AGIAIDPLVALPVGGLMGVVVMGQWRHTNQYMVSGLSRMAPVAIMLLGTGTLAGIIANSG CCCHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC LKDVLISGLSASGMPSYLLAPISGALMSMATASTTAGTAVASAVFSSTLIGMGISALAGA HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHHHH AMVHAGATVLDHMPHGSFFHATGGSVNMQVHERLKLLPYETAVGLMIAFVSTLMFGVFNL HHHHHCHHHHHCCCCCCEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC AG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]