| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is lolD
Identifier: 153949323
GI number: 153949323
Start: 1859392
End: 1860096
Strand: Direct
Name: lolD
Synonym: YpsIP31758_1601
Alternate gene names: 153949323
Gene position: 1859392-1860096 (Clockwise)
Preceding gene: 153950693
Following gene: 153949780
Centisome position: 39.37
GC content: 49.22
Gene sequence:
>705_bases ATGAGTAATCATCCTTTATTACAATGTATAAACCTGTGCAAGCGTTATCAGGAAGGCCAACTGCATACTGATGTCCTGCG CAATGTCTCTTTCGCTATCGAGCCTGGTGAACTGATGGCGATTGTCGGCAGTTCAGGTTCAGGTAAAAGCACGCTGTTGC ATTTGCTGGGGGGGCTGGATTCACCTACCTCTGGTGAGGTTATTTATCAGGGGCGTTCGCTTAACCAACTCTCTTCTACC GCGAAAGCTGAATTGCGTAATCGAGAGTTAGGTTTTATCTATCAATTTCATCATTTGTTGCCCGATTTTACCGCGTTAGA AAATGTCGCCATGCCATTACTCATCGGCGGCAGTAAACCCGCTGAAGCGCAAGAGAAAGCCCATGAGATGCTGGCGGCGG TGGGGTTGGAGAAGCGCAGTAAACATCGTCCATCGGAGTTATCAGGGGGAGAGCGCCAACGGGTCGCTATCGCCCGTTCT TTGGTAAATAACCCATCGCTGGTATTGGCAGATGAACCTACCGGTAATCTGGACCAACGCAATGCCGACAGTATTTTTAA TCTGTTAGGTGAATTGAATGTTCGTCAGGGGACCGCGTTTCTGGTGGTGACTCACGATTTACAATTAGCGAAACGGATGA GCCGTCAACTTGAAATGCGAGATGGTCAGCTACAACACCATTTGACGCTGGTGGGGGCCGAGTGA
Upstream 100 bases:
>100_bases GTTACGGTCATTGCACTGCTAGCCATGGTGATCGCTCTATTGTCCACGCTGTACCCTTCCTGGCGCGCCGCCGCCGCACA ACCCGCAGAGGCTTTACGCT
Downstream 100 bases:
>100_bases TGGGGGGTTCGCCACTTTCACTTCTTATCGGTTTACGGTTTAGCCGTGGTCGCCGTCGTGGCGGTATGGTGTCGTTAATC TCCGTGATTTCTACGTTAGG
Product: lipoprotein transporter ATP-binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYQGRSLNQLSST AKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARS LVNNPSLVLADEPTGNLDQRNADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE
Sequences:
>Translated_234_residues MSNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYQGRSLNQLSST AKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARS LVNNPSLVLADEPTGNLDQRNADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE >Mature_233_residues SNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLDSPTSGEVIYQGRSLNQLSSTA KAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKPAEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARSL VNNPSLVLADEPTGNLDQRNADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE
Specific function: Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-de
COG id: COG1136
COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain
Homologues:
Organism=Homo sapiens, GI9955963, Length=212, Percent_Identity=33.4905660377358, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI156105685, Length=220, Percent_Identity=30.9090909090909, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI153792144, Length=185, Percent_Identity=29.7297297297297, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI27436953, Length=216, Percent_Identity=27.7777777777778, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI27477115, Length=181, Percent_Identity=31.4917127071823, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI42741659, Length=212, Percent_Identity=28.7735849056604, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI4505771, Length=216, Percent_Identity=28.2407407407407, Blast_Score=87, Evalue=9e-18, Organism=Homo sapiens, GI9961252, Length=216, Percent_Identity=28.2407407407407, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI215820660, Length=160, Percent_Identity=37.5, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI20143975, Length=160, Percent_Identity=37.5, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI27262624, Length=187, Percent_Identity=26.7379679144385, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI27262626, Length=187, Percent_Identity=26.7379679144385, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI46592915, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI46592971, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI46592898, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI46592964, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI46592978, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI46592956, Length=175, Percent_Identity=33.1428571428571, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI9665248, Length=210, Percent_Identity=30, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI31657092, Length=224, Percent_Identity=27.2321428571429, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI105990541, Length=217, Percent_Identity=30.8755760368664, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI42490749, Length=201, Percent_Identity=31.3432835820896, Blast_Score=82, Evalue=3e-16, Organism=Homo sapiens, GI11967969, Length=194, Percent_Identity=31.9587628865979, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI9961250, Length=219, Percent_Identity=28.310502283105, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI21536378, Length=206, Percent_Identity=29.126213592233, Blast_Score=81, Evalue=7e-16, Organism=Homo sapiens, GI171184400, Length=214, Percent_Identity=31.3084112149533, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI9955968, Length=163, Percent_Identity=32.5153374233129, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI9955966, Length=163, Percent_Identity=32.5153374233129, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI45243524, Length=163, Percent_Identity=32.5153374233129, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI116734710, Length=216, Percent_Identity=26.3888888888889, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI255708477, Length=216, Percent_Identity=30.0925925925926, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI148612844, Length=216, Percent_Identity=30.0925925925926, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI6005701, Length=200, Percent_Identity=26, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI21536376, Length=202, Percent_Identity=28.7128712871287, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI27881501, Length=221, Percent_Identity=23.5294117647059, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI30795238, Length=221, Percent_Identity=23.5294117647059, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI150417984, Length=209, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI45446740, Length=227, Percent_Identity=22.9074889867841, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI47078218, Length=227, Percent_Identity=22.9074889867841, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI11967971, Length=179, Percent_Identity=30.7262569832402, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI90421313, Length=177, Percent_Identity=30.5084745762712, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI62526033, Length=237, Percent_Identity=26.1603375527426, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI148612853, Length=185, Percent_Identity=28.6486486486486, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87081834, Length=232, Percent_Identity=79.3103448275862, Blast_Score=374, Evalue=1e-105, Organism=Escherichia coli, GI1786703, Length=225, Percent_Identity=44.8888888888889, Blast_Score=191, Evalue=2e-50, Organism=Escherichia coli, GI1787105, Length=220, Percent_Identity=42.2727272727273, Blast_Score=180, Evalue=7e-47, Organism=Escherichia coli, GI1789873, Length=201, Percent_Identity=43.7810945273632, Blast_Score=167, Evalue=5e-43, Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=37.5, Blast_Score=150, Evalue=5e-38, Organism=Escherichia coli, GI1787029, Length=200, Percent_Identity=41, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI87081791, Length=210, Percent_Identity=37.6190476190476, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=36.7256637168142, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789032, Length=200, Percent_Identity=36, Blast_Score=127, Evalue=5e-31, Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=37.0535714285714, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=34.5132743362832, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI48994997, Length=227, Percent_Identity=37.0044052863436, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789891, Length=208, Percent_Identity=37.9807692307692, Blast_Score=120, Evalue=7e-29, Organism=Escherichia coli, GI1786563, Length=192, Percent_Identity=38.0208333333333, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1789672, Length=212, Percent_Identity=32.5471698113208, Blast_Score=117, Evalue=5e-28, Organism=Escherichia coli, GI1787712, Length=200, Percent_Identity=36.5, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI145693107, Length=228, Percent_Identity=35.0877192982456, Blast_Score=117, Evalue=9e-28, Organism=Escherichia coli, GI1786872, Length=216, Percent_Identity=35.1851851851852, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1788761, Length=208, Percent_Identity=32.6923076923077, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI1788506, Length=214, Percent_Identity=35.0467289719626, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI87082267, Length=195, Percent_Identity=34.3589743589744, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1787164, Length=207, Percent_Identity=37.6811594202899, Blast_Score=111, Evalue=4e-26, Organism=Escherichia coli, GI1788644, Length=219, Percent_Identity=36.5296803652968, Blast_Score=110, Evalue=8e-26, Organism=Escherichia coli, GI87081709, Length=206, Percent_Identity=31.5533980582524, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790467, Length=216, Percent_Identity=32.4074074074074, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI1787089, Length=206, Percent_Identity=32.0388349514563, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790534, Length=196, Percent_Identity=34.6938775510204, Blast_Score=103, Evalue=9e-24, Organism=Escherichia coli, GI1790544, Length=235, Percent_Identity=32.3404255319149, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1790525, Length=212, Percent_Identity=31.1320754716981, Blast_Score=101, Evalue=3e-23, Organism=Escherichia coli, GI1786698, Length=207, Percent_Identity=34.2995169082126, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788450, Length=196, Percent_Identity=32.6530612244898, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1786253, Length=196, Percent_Identity=32.6530612244898, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1789586, Length=184, Percent_Identity=35.8695652173913, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787547, Length=229, Percent_Identity=30.1310043668122, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1790739, Length=198, Percent_Identity=36.8686868686869, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787758, Length=196, Percent_Identity=32.1428571428571, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI48994883, Length=191, Percent_Identity=36.6492146596859, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1787500, Length=194, Percent_Identity=32.9896907216495, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786319, Length=220, Percent_Identity=30.9090909090909, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788210, Length=208, Percent_Identity=30.7692307692308, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1786803, Length=207, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1789963, Length=210, Percent_Identity=34.2857142857143, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI48995001, Length=203, Percent_Identity=29.5566502463054, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1787548, Length=230, Percent_Identity=27.8260869565217, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081782, Length=188, Percent_Identity=30.3191489361702, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1786345, Length=234, Percent_Identity=30.7692307692308, Blast_Score=87, Evalue=8e-19, Organism=Escherichia coli, GI1789864, Length=232, Percent_Identity=26.7241379310345, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1788897, Length=232, Percent_Identity=30.1724137931034, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787112, Length=208, Percent_Identity=34.1346153846154, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI1787792, Length=224, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=2e-17, Organism=Escherichia coli, GI1790190, Length=204, Percent_Identity=26.9607843137255, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1790162, Length=209, Percent_Identity=28.7081339712919, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=29.2452830188679, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI87082268, Length=195, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1788053, Length=217, Percent_Identity=30.4147465437788, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1787143, Length=205, Percent_Identity=32.1951219512195, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1789890, Length=213, Percent_Identity=30.9859154929577, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1789991, Length=204, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI48994943, Length=197, Percent_Identity=26.3959390862944, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789593, Length=203, Percent_Identity=28.0788177339901, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787759, Length=209, Percent_Identity=33.4928229665072, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1788472, Length=208, Percent_Identity=25.4807692307692, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI1786653, Length=209, Percent_Identity=30.1435406698565, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1788540, Length=218, Percent_Identity=29.8165137614679, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786981, Length=189, Percent_Identity=31.2169312169312, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786654, Length=205, Percent_Identity=31.219512195122, Blast_Score=71, Evalue=5e-14, Organism=Escherichia coli, GI1789751, Length=213, Percent_Identity=26.2910798122066, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1787041, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI87082064, Length=209, Percent_Identity=29.6650717703349, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI71996809, Length=207, Percent_Identity=33.8164251207729, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI193211015, Length=207, Percent_Identity=33.8164251207729, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI193211017, Length=210, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=5e-21, Organism=Caenorhabditis elegans, GI115533608, Length=220, Percent_Identity=27.7272727272727, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17541710, Length=191, Percent_Identity=32.9842931937173, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI193209708, Length=209, Percent_Identity=32.0574162679426, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71992290, Length=218, Percent_Identity=27.5229357798165, Blast_Score=89, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71984940, Length=219, Percent_Identity=29.6803652968037, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI193202349, Length=207, Percent_Identity=30.4347826086957, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI25146777, Length=211, Percent_Identity=30.3317535545024, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI193208177, Length=199, Percent_Identity=31.6582914572864, Blast_Score=86, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71992285, Length=209, Percent_Identity=32.5358851674641, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI115533592, Length=211, Percent_Identity=30.3317535545024, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI212646699, Length=211, Percent_Identity=29.3838862559242, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17565938, Length=199, Percent_Identity=27.1356783919598, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17558664, Length=161, Percent_Identity=32.9192546583851, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI115534520, Length=212, Percent_Identity=28.7735849056604, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17567265, Length=211, Percent_Identity=28.436018957346, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=25.2336448598131, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17533971, Length=199, Percent_Identity=27.6381909547739, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17567269, Length=209, Percent_Identity=30.1435406698565, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17543740, Length=208, Percent_Identity=25, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17569143, Length=203, Percent_Identity=30.5418719211823, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI115535101, Length=213, Percent_Identity=28.6384976525822, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17569081, Length=212, Percent_Identity=26.8867924528302, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17569145, Length=203, Percent_Identity=29.064039408867, Blast_Score=71, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17555318, Length=220, Percent_Identity=25.9090909090909, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI71996550, Length=176, Percent_Identity=31.8181818181818, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI86563255, Length=214, Percent_Identity=29.4392523364486, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71983510, Length=176, Percent_Identity=24.4318181818182, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71983516, Length=176, Percent_Identity=24.4318181818182, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI71983523, Length=176, Percent_Identity=24.4318181818182, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17559834, Length=202, Percent_Identity=28.2178217821782, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17551700, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17551702, Length=219, Percent_Identity=28.310502283105, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17539902, Length=208, Percent_Identity=26.4423076923077, Blast_Score=67, Evalue=9e-12, Organism=Caenorhabditis elegans, GI17510237, Length=203, Percent_Identity=24.1379310344828, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17552010, Length=198, Percent_Identity=29.7979797979798, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6323959, Length=161, Percent_Identity=37.2670807453416, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6319856, Length=192, Percent_Identity=29.6875, Blast_Score=76, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324985, Length=194, Percent_Identity=28.8659793814433, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323217, Length=207, Percent_Identity=27.0531400966184, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6321121, Length=214, Percent_Identity=26.6355140186916, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI24666092, Length=203, Percent_Identity=27.5862068965517, Blast_Score=93, Evalue=1e-19, Organism=Drosophila melanogaster, GI24641565, Length=188, Percent_Identity=34.0425531914894, Blast_Score=91, Evalue=6e-19, Organism=Drosophila melanogaster, GI17647959, Length=234, Percent_Identity=30.3418803418803, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI45552805, Length=193, Percent_Identity=31.0880829015544, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI116007328, Length=215, Percent_Identity=26.5116279069767, Blast_Score=85, Evalue=4e-17, Organism=Drosophila melanogaster, GI28574150, Length=215, Percent_Identity=26.5116279069767, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI17647219, Length=202, Percent_Identity=30.6930693069307, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI28574744, Length=186, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI116007184, Length=207, Percent_Identity=29.951690821256, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI221500365, Length=207, Percent_Identity=29.951690821256, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI21357907, Length=211, Percent_Identity=30.8056872037915, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581191, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581189, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581193, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24581195, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574533, Length=186, Percent_Identity=32.258064516129, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI281363262, Length=218, Percent_Identity=30.7339449541284, Blast_Score=81, Evalue=5e-16, Organism=Drosophila melanogaster, GI161076682, Length=186, Percent_Identity=33.8709677419355, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24653245, Length=218, Percent_Identity=30.7339449541284, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI161076684, Length=186, Percent_Identity=33.8709677419355, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24581617, Length=186, Percent_Identity=33.8709677419355, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI24581615, Length=186, Percent_Identity=33.8709677419355, Blast_Score=80, Evalue=9e-16, Organism=Drosophila melanogaster, GI221512771, Length=222, Percent_Identity=25.6756756756757, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI19920532, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24580930, Length=189, Percent_Identity=32.2751322751323, Blast_Score=77, Evalue=9e-15, Organism=Drosophila melanogaster, GI24648314, Length=208, Percent_Identity=25.4807692307692, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24659289, Length=167, Percent_Identity=34.7305389221557, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85816269, Length=189, Percent_Identity=35.4497354497354, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580553, Length=189, Percent_Identity=35.4497354497354, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85724864, Length=189, Percent_Identity=35.4497354497354, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24580555, Length=189, Percent_Identity=35.4497354497354, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI23397593, Length=213, Percent_Identity=30.5164319248826, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI85726357, Length=193, Percent_Identity=30.0518134715026, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI85724858, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI85724856, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24580547, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24580551, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24580549, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI24580545, Length=172, Percent_Identity=33.1395348837209, Blast_Score=74, Evalue=8e-14, Organism=Drosophila melanogaster, GI17136662, Length=205, Percent_Identity=29.7560975609756, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24643674, Length=223, Percent_Identity=24.6636771300448, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24642252, Length=214, Percent_Identity=26.1682242990654, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI18859989, Length=214, Percent_Identity=26.1682242990654, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI28571871, Length=180, Percent_Identity=29.4444444444444, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650855, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136592, Length=193, Percent_Identity=33.6787564766839, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650853, Length=211, Percent_Identity=27.0142180094787, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI281362751, Length=211, Percent_Identity=27.0142180094787, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582014, Length=200, Percent_Identity=26.5, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24582012, Length=200, Percent_Identity=26.5, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI28573573, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI28573571, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI85725262, Length=192, Percent_Identity=26.0416666666667, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24581407, Length=173, Percent_Identity=36.4161849710983, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI45552199, Length=173, Percent_Identity=36.4161849710983, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28571209, Length=211, Percent_Identity=21.8009478672986, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LOLD_YERPA (Q1C6Q8)
Other databases:
- EMBL: CP000308 - RefSeq: YP_651809.1 - ProteinModelPortal: Q1C6Q8 - SMR: Q1C6Q8 - STRING: Q1C6Q8 - GeneID: 4122402 - GenomeReviews: CP000308_GR - KEGG: ypa:YPA_1898 - eggNOG: COG1136 - HOGENOM: HBG758042 - OMA: NSLNAMS - ProtClustDB: PRK11629 - BioCyc: YPES360102:YPA_1898-MONOMER - HAMAP: MF_01708 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015854 - InterPro: IPR003593 - InterPro: IPR011924 - SMART: SM00382 - TIGRFAMs: TIGR02211
Pfam domain/function: PF00005 ABC_tran
EC number: NA
Molecular weight: Translated: 25643; Mature: 25511
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51244 LOLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLD CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCC SPTSGEVIYQGRSLNQLSSTAKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKP CCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCEEEECCCCC AEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARSLVNNPSLVLADEPTGNLDQR CHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCC NADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE CHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEECC >Mature Secondary Structure SNHPLLQCINLCKRYQEGQLHTDVLRNVSFAIEPGELMAIVGSSGSGKSTLLHLLGGLD CCCHHHHHHHHHHHHHCCCHHHHHHHCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCC SPTSGEVIYQGRSLNQLSSTAKAELRNRELGFIYQFHHLLPDFTALENVAMPLLIGGSKP CCCCCCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCCEEEECCCCC AEAQEKAHEMLAAVGLEKRSKHRPSELSGGERQRVAIARSLVNNPSLVLADEPTGNLDQR CHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCC NADSIFNLLGELNVRQGTAFLVVTHDLQLAKRMSRQLEMRDGQLQHHLTLVGAE CHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA