Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153949263

Identifier: 153949263

GI number: 153949263

Start: 2840772

End: 2841458

Strand: Reverse

Name: 153949263

Synonym: YpsIP31758_2508

Alternate gene names: NA

Gene position: 2841458-2840772 (Counterclockwise)

Preceding gene: 153949289

Following gene: 153949846

Centisome position: 60.16

GC content: 61.28

Gene sequence:

>687_bases
ATGAATCCTCACCTAACCGAACACCCCCCAGTCGGGGATATTGACGTCCTGTTGCAGGACACCTGGCTACAGGTGATCAG
CCTGCGTCAAGGGGTAACCTGTGCCGAGGGCGAAGGGCAGGCATTCTGGCAGCGCTGTGTGGCGGACATTGAACGTGTCC
ATCAGGCGCTGAAAGACGCCGGTCACAGCGAGCAGAGTTGCCAGCACATCCGATACGCCCAATGTGCACTGCTGGATGAG
ACCGTGAAAGGGCGCGGTGTACAGGATGACGCCTACTTCGTGTGGTGCCATTCGCCCTTACAGGCGCATTTTTTCAATAC
CCTGGATGCCGGGAGCCAGTTGTACGAGCAGATGCGCGCCGTGTTGCGTGAACCTGCGCCGGACAGCGCGGTACTGACCT
GTTTTCACCGGGTATTGATGTTGGGCTTCCTCGGCGGGTACGCCTCCCCGGCGGCTTCTGAACGGGAGCAACTGATCGAT
CAACTGAGCGTGCAGGTACCGGCGTTCAGTGTCGCGCCATCCGGTGGGATCCTGGCAAGCGCCGCCTCCCGCAACCGGTT
GGGGATCTGGCTGCGTTACTGGCCGGTACGGCTCGGGCTGGCTGCGCTGATGGTCGCGCTGTTGTGGTGGGGCCTTGATC
ACTGGCTGTCCGGTCTGTTAACCACCTTACTGCCGGAGCCGGTGTAA

Upstream 100 bases:

>100_bases
ACCCTGCGGCGACGCAGATGATGGAGACGGGGGCCTGTGTGTTCTATGTACCCGGTACGCTGGGTGAGATCCAACTGGAG
CTGTTTGCGGTGCTACGCGC

Downstream 100 bases:

>100_bases
TGAGTCGGTGGTGGCAACGTGGGTTGTGGCTCTGGGCGGGTTTGCTGGCGGTCATCTTGTGTCTGGCATTTCTGCCGCTC
TCCCCGTGGGGGCGCTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE
TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRAVLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLID
QLSVQVPAFSVAPSGGILASAASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV

Sequences:

>Translated_228_residues
MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE
TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRAVLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLID
QLSVQVPAFSVAPSGGILASAASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV
>Mature_228_residues
MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDAGHSEQSCQHIRYAQCALLDE
TVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRAVLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLID
QLSVQVPAFSVAPSGGILASAASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25279; Mature: 25279

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GHSEQSCQHIRYAQCALLDETVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
VLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLIDQLSVQVPAFSVAPSGGILAS
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEC
AASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNPHLTEHPPVGDIDVLLQDTWLQVISLRQGVTCAEGEGQAFWQRCVADIERVHQALKDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GHSEQSCQHIRYAQCALLDETVKGRGVQDDAYFVWCHSPLQAHFFNTLDAGSQLYEQMRA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
VLREPAPDSAVLTCFHRVLMLGFLGGYASPAASEREQLIDQLSVQVPAFSVAPSGGILAS
HHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEC
AASRNRLGIWLRYWPVRLGLAALMVALLWWGLDHWLSGLLTTLLPEPV
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA