| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949242
Identifier: 153949242
GI number: 153949242
Start: 2523212
End: 2524105
Strand: Reverse
Name: 153949242
Synonym: YpsIP31758_2203
Alternate gene names: NA
Gene position: 2524105-2523212 (Counterclockwise)
Preceding gene: 153949406
Following gene: 153949188
Centisome position: 53.44
GC content: 44.85
Gene sequence:
>894_bases ATGAGTAGCTATTTTGGCCGAAATTACCAGCTAACCATTACCCTGGTCAGTGGTGATGAGCTGACGTATCAGCCACCATT GGAGATACGCTTTGCTGTAGATAATACACCGCAGAATGTTGATGCAACCGCCAGAATTACCCTTTACGGTATTTCAGCTC GCACTCGTGCATTAATCCAACGCTATGACGATAAAGAAAAACGCTATGGCCGCCTGATTTTGAAAGCAGGTTATGGCGAT AATATTGGCACGATATTCAGTGGGCAAATACATAATATTGAAGTGGTCAAAGAGGGCGTCAATACCTGCCTGCGACTGTA TTGCCGCACTATTGGTCTGACATGGAATACGACGATTTTTAAAACATGGGGAACCAATACCCCGGCTATTGAAATGCTAA AAGATGTTGCGGTGGCTTTTGGTCTTGATGTTGAAGTGATTGGCGACTTTTCAGATCTGCCTCGCTTTACCACCTCCTAT AATTCCGGTGGTCGCTTATGTCGCTATATTCTAGACAGCATGAAAGAGGACTGGAAATATTACTGGATGATCACGTCATC ACGGGTGCTATTAGCCAGAGAGGGGGCAGCCAGAACATGGGCAACCCATGAGATAACTGCGAAGAATGGTATGGAAAGTG TACCCCGCTGGTATCTCAATACGATGGAGATTGACGTTAAAATGAATCATCAGATCCAGCCAGCCGATGTGATTAACGTA ACGTCCAGTTTCTGGACGATTAACTTCAGTGGTATGTATAACACCGATCTCAATAATCTGGCGAATATTCAGCAACAGAC GGGTCAGTTTAATGTGTTACGAACATACCATGAGGGGACTTTTTGGGGGGATATATGGAAAACCACGCTGATCAGTCAAT GGCGTACTCTCTGA
Upstream 100 bases:
>100_bases GCCGGGTTAAATACGGATATTGGTCCTCTGGTTTTCGACGGGGATACACCAACTATCGCTAATCTTGGCATCAGTAACCG TCTGATATGGTATCCCTATA
Downstream 100 bases:
>100_bases GGTCATTATGATTGAGAGTAATCCACTCTATACCACGCTAATGATGTTAAAACAAACCATGATACATGATCTGATGATCG GTATACCCGGCAAGGTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSSYFGRNYQLTITLVSGDELTYQPPLEIRFAVDNTPQNVDATARITLYGISARTRALIQRYDDKEKRYGRLILKAGYGD NIGTIFSGQIHNIEVVKEGVNTCLRLYCRTIGLTWNTTIFKTWGTNTPAIEMLKDVAVAFGLDVEVIGDFSDLPRFTTSY NSGGRLCRYILDSMKEDWKYYWMITSSRVLLAREGAARTWATHEITAKNGMESVPRWYLNTMEIDVKMNHQIQPADVINV TSSFWTINFSGMYNTDLNNLANIQQQTGQFNVLRTYHEGTFWGDIWKTTLISQWRTL
Sequences:
>Translated_297_residues MSSYFGRNYQLTITLVSGDELTYQPPLEIRFAVDNTPQNVDATARITLYGISARTRALIQRYDDKEKRYGRLILKAGYGD NIGTIFSGQIHNIEVVKEGVNTCLRLYCRTIGLTWNTTIFKTWGTNTPAIEMLKDVAVAFGLDVEVIGDFSDLPRFTTSY NSGGRLCRYILDSMKEDWKYYWMITSSRVLLAREGAARTWATHEITAKNGMESVPRWYLNTMEIDVKMNHQIQPADVINV TSSFWTINFSGMYNTDLNNLANIQQQTGQFNVLRTYHEGTFWGDIWKTTLISQWRTL >Mature_296_residues SSYFGRNYQLTITLVSGDELTYQPPLEIRFAVDNTPQNVDATARITLYGISARTRALIQRYDDKEKRYGRLILKAGYGDN IGTIFSGQIHNIEVVKEGVNTCLRLYCRTIGLTWNTTIFKTWGTNTPAIEMLKDVAVAFGLDVEVIGDFSDLPRFTTSYN SGGRLCRYILDSMKEDWKYYWMITSSRVLLAREGAARTWATHEITAKNGMESVPRWYLNTMEIDVKMNHQIQPADVINVT SSFWTINFSGMYNTDLNNLANIQQQTGQFNVLRTYHEGTFWGDIWKTTLISQWRTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34119; Mature: 33988
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYFGRNYQLTITLVSGDELTYQPPLEIRFAVDNTPQNVDATARITLYGISARTRALIQ CCCCCCCCEEEEEEEEECCCEEECCCCEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHH RYDDKEKRYGRLILKAGYGDNIGTIFSGQIHNIEVVKEGVNTCLRLYCRTIGLTWNTTIF HCCCHHHHCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCEEE KTWGTNTPAIEMLKDVAVAFGLDVEVIGDFSDLPRFTTSYNSGGRLCRYILDSMKEDWKY EECCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCCCEECCCCCHHHHHHHHHHHHCCCEE YWMITSSRVLLAREGAARTWATHEITAKNGMESVPRWYLNTMEIDVKMNHQIQPADVINV EEEEECCEEEEEECCCCCEEEEEEEECCCCCHHCCHHEEEEEEEEEEECCCCCCCCEEEE TSSFWTINFSGMYNTDLNNLANIQQQTGQFNVLRTYHEGTFWGDIWKTTLISQWRTL ECCEEEEEECCEECCCHHHHHHHHHHCCCEEEEEEEECCCEEHHHHHHHHHHHHCCC >Mature Secondary Structure SSYFGRNYQLTITLVSGDELTYQPPLEIRFAVDNTPQNVDATARITLYGISARTRALIQ CCCCCCCEEEEEEEEECCCEEECCCCEEEEEECCCCCCCCCEEEEEEEECCHHHHHHHH RYDDKEKRYGRLILKAGYGDNIGTIFSGQIHNIEVVKEGVNTCLRLYCRTIGLTWNTTIF HCCCHHHHCCEEEEEECCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEECCEEE KTWGTNTPAIEMLKDVAVAFGLDVEVIGDFSDLPRFTTSYNSGGRLCRYILDSMKEDWKY EECCCCCHHHHHHHHHHHHHCCCEEEECCHHHCCCCEECCCCCHHHHHHHHHHHHCCCEE YWMITSSRVLLAREGAARTWATHEITAKNGMESVPRWYLNTMEIDVKMNHQIQPADVINV EEEEECCEEEEEECCCCCEEEEEEEECCCCCHHCCHHEEEEEEEEEEECCCCCCCCEEEE TSSFWTINFSGMYNTDLNNLANIQQQTGQFNVLRTYHEGTFWGDIWKTTLISQWRTL ECCEEEEEECCEECCCHHHHHHHHHHCCCEEEEEEEECCCEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA