| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949188
Identifier: 153949188
GI number: 153949188
Start: 2522527
End: 2523204
Strand: Reverse
Name: 153949188
Synonym: YpsIP31758_2202
Alternate gene names: NA
Gene position: 2523204-2522527 (Counterclockwise)
Preceding gene: 153949242
Following gene: 153949625
Centisome position: 53.42
GC content: 50.0
Gene sequence:
>678_bases ATGATTGAGAGTAATCCACTCTATACCACGCTAATGATGTTAAAACAAACCATGATACATGATCTGATGATCGGTATACC CGGCAAGGTCATTAGCTATAACTCAAGGTTACAGCGTGCTGTAGTGGAATGCGGTATTCAACGGCACATTGGCGACAACC AGTTCATCACACTGCCATTGATTGAACATGTGCCCGTGCACTTTTCCGGTAGTGCTGAGTGGACTGTTTTTCACGAGTTA CCGACGGGTACGGAGGGCTATATCCATTTCAGCCAGCGTTCTATCGACAATTGGTTGAGTCAAGGGGGGCCAGTTGCCCC ACTGGATGCCCGAATGTTTAATCCATCAGATGCTTTCTTTGCCCCTGGCTACCGTTCCCAACAAACCGTTATCGCTGGCT TGCCGACGGATGGCATCGGTTTTAGTAATAAAAGCGGCGGTGTGCGCATTCATCTCACTGAGAGTGAAATCAAACTGGTA GCCGGAGGTACCACACTGGTACTCACCGGATCTGGTATGAGATACAGCGGCCCTGAGTTTTCCAATGATGGGCAAACCAT GCTGAATGGTCGTACCGAGGTAACACAAGGTGGCCTGGCAGTTGGTGATCTGGAGGTTGGTGAACATGACCACGGCGGTG TACAGCGTGGCAATGATCGCACTGATGGGCCGCAATAA
Upstream 100 bases:
>100_bases GGTCAGTTTAATGTGTTACGAACATACCATGAGGGGACTTTTTGGGGGGATATATGGAAAACCACGCTGATCAGTCAATG GCGTACTCTCTGAGGTCATT
Downstream 100 bases:
>100_bases CCTAATTACTCAGATTTGCTCCTACCTGTTATCGCCCTGGCTAATGCTGGGGCTTTTTGTTTCTGGAGGCACGATGATCC GCAATTACCAAAATGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MIESNPLYTTLMMLKQTMIHDLMIGIPGKVISYNSRLQRAVVECGIQRHIGDNQFITLPLIEHVPVHFSGSAEWTVFHEL PTGTEGYIHFSQRSIDNWLSQGGPVAPLDARMFNPSDAFFAPGYRSQQTVIAGLPTDGIGFSNKSGGVRIHLTESEIKLV AGGTTLVLTGSGMRYSGPEFSNDGQTMLNGRTEVTQGGLAVGDLEVGEHDHGGVQRGNDRTDGPQ
Sequences:
>Translated_225_residues MIESNPLYTTLMMLKQTMIHDLMIGIPGKVISYNSRLQRAVVECGIQRHIGDNQFITLPLIEHVPVHFSGSAEWTVFHEL PTGTEGYIHFSQRSIDNWLSQGGPVAPLDARMFNPSDAFFAPGYRSQQTVIAGLPTDGIGFSNKSGGVRIHLTESEIKLV AGGTTLVLTGSGMRYSGPEFSNDGQTMLNGRTEVTQGGLAVGDLEVGEHDHGGVQRGNDRTDGPQ >Mature_225_residues MIESNPLYTTLMMLKQTMIHDLMIGIPGKVISYNSRLQRAVVECGIQRHIGDNQFITLPLIEHVPVHFSGSAEWTVFHEL PTGTEGYIHFSQRSIDNWLSQGGPVAPLDARMFNPSDAFFAPGYRSQQTVIAGLPTDGIGFSNKSGGVRIHLTESEIKLV AGGTTLVLTGSGMRYSGPEFSNDGQTMLNGRTEVTQGGLAVGDLEVGEHDHGGVQRGNDRTDGPQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24379; Mature: 24379
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIESNPLYTTLMMLKQTMIHDLMIGIPGKVISYNSRLQRAVVECGIQRHIGDNQFITLPL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEE IEHVPVHFSGSAEWTVFHELPTGTEGYIHFSQRSIDNWLSQGGPVAPLDARMFNPSDAFF CCCCCEEECCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCEE APGYRSQQTVIAGLPTDGIGFSNKSGGVRIHLTESEIKLVAGGTTLVLTGSGMRYSGPEF CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCEEEEEECCCCEECCCCC SNDGQTMLNGRTEVTQGGLAVGDLEVGEHDHGGVQRGNDRTDGPQ CCCCCEEECCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIESNPLYTTLMMLKQTMIHDLMIGIPGKVISYNSRLQRAVVECGIQRHIGDNQFITLPL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEE IEHVPVHFSGSAEWTVFHELPTGTEGYIHFSQRSIDNWLSQGGPVAPLDARMFNPSDAFF CCCCCEEECCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHCCCCCCCCCCEEECCCCCEE APGYRSQQTVIAGLPTDGIGFSNKSGGVRIHLTESEIKLVAGGTTLVLTGSGMRYSGPEF CCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCEEEEEECCCCEECCCCC SNDGQTMLNGRTEVTQGGLAVGDLEVGEHDHGGVQRGNDRTDGPQ CCCCCEEECCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA