| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153949086
Identifier: 153949086
GI number: 153949086
Start: 835062
End: 835937
Strand: Reverse
Name: 153949086
Synonym: YpsIP31758_0691
Alternate gene names: NA
Gene position: 835937-835062 (Counterclockwise)
Preceding gene: 153947356
Following gene: 153948203
Centisome position: 17.7
GC content: 50.23
Gene sequence:
>876_bases ATGCGCAGTAATAACAAATTTACATTAAAAAAATTGGCCCTGGCGTTGATGTTAGCAGGTTGCACCATAAGCAACGCTTA TGCCGTGCTCATTCCCGTGGCGGGTGCCATCCAGGGAAGCGCGCCCACCTTGAGTGCTCCATCAAATAGTGCGCTGCATG CCGTGGACCTGAGCAGCAATGCGACAGGAGCGGTACTGGCCAGTGGTGACACCATCACTCTAACCTATACCTACAACGAC GCTGACGAAGATCTGGATAATTCCATAAACTATGTGAACTGGTACTATACCAAGGGGGGGGTGGATACTCAGATTGCCAC GACCAATATCACTAACAGCCCGGCTAAAACTAACGATGGCAAAGGAAGGAGTGTGCTGATCATTCCTGCTACAGCAATTG GTGCGGATGCGATCAAGGTGGTGATACAGGAATTTTCAGCGTCCGGTGATCCGATAAGCGGTCAGACCATTTCCGTTGCT GATACCAGTACCGGTGGTGGTGGTACGACCACACGCCCTGGTCCTATAGCACCAGGTTCGAACGTGACACCAGGGATTTA CCTGAGCACCGATACCCTGTTTACCAACAACCTGCTTGGTTCAGAAACAATTCTGTCCGCAAACAATGTTTATGTGTTCA AACTGTGGGACAGCGAAGCCGTTGGAGTGATCGATTTAACCAATGCGGTCCATTACAACTGGCGCTTACTAGGAGACAGT GCGACTGATAGTGTTGCCGCACCGACAACGGGCTTTGTAACCAGTGTGTCTAATGCAGATTTTAGTGTTCCAATGAATAC CGCCGCGGACGGTACACAACTGACCGGTTCTGTCGATGGTATGCAGGGCTTCCAGTTAACGGTGGATTACAACTAA
Upstream 100 bases:
>100_bases GATAAATCTCGTTTAACATCATATAAAAACCAAAAACAATCCCATCCAAGGGAGCTGTATTTTTATTTTATAAAGATATT CTTACTAAGGGAAATATAAT
Downstream 100 bases:
>100_bases TCCCTGCCGTACTCGATGGTTACTGATACAGGCCGGTTTTCCCGCCTCAAACTGCTCCCCCGATAAGACAACGTTGAGCT ATGGGTAGGCAGAAAAGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSNATGAVLASGDTITLTYTYND ADEDLDNSINYVNWYYTKGGVDTQIATTNITNSPAKTNDGKGRSVLIIPATAIGADAIKVVIQEFSASGDPISGQTISVA DTSTGGGGTTTRPGPIAPGSNVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN
Sequences:
>Translated_291_residues MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSNATGAVLASGDTITLTYTYND ADEDLDNSINYVNWYYTKGGVDTQIATTNITNSPAKTNDGKGRSVLIIPATAIGADAIKVVIQEFSASGDPISGQTISVA DTSTGGGGTTTRPGPIAPGSNVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN >Mature_291_residues MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSNATGAVLASGDTITLTYTYND ADEDLDNSINYVNWYYTKGGVDTQIATTNITNSPAKTNDGKGRSVLIIPATAIGADAIKVVIQEFSASGDPISGQTISVA DTSTGGGGTTTRPGPIAPGSNVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29978; Mature: 29978
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSN CCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCC ATGAVLASGDTITLTYTYNDADEDLDNSINYVNWYYTKGGVDTQIATTNITNSPAKTNDG CCEEEEECCCEEEEEEEECCCCHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC KGRSVLIIPATAIGADAIKVVIQEFSASGDPISGQTISVADTSTGGGGTTTRPGPIAPGS CCCEEEEEECHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC NVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS CCCCCEEEEECCEEECCCCCCCEEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEECCC ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN CCCCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECC >Mature Secondary Structure MRSNNKFTLKKLALALMLAGCTISNAYAVLIPVAGAIQGSAPTLSAPSNSALHAVDLSSN CCCCCEEHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCCCCCEEEEEECCC ATGAVLASGDTITLTYTYNDADEDLDNSINYVNWYYTKGGVDTQIATTNITNSPAKTNDG CCEEEEECCCEEEEEEEECCCCHHHCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCCC KGRSVLIIPATAIGADAIKVVIQEFSASGDPISGQTISVADTSTGGGGTTTRPGPIAPGS CCCEEEEEECHHCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCC NVTPGIYLSTDTLFTNNLLGSETILSANNVYVFKLWDSEAVGVIDLTNAVHYNWRLLGDS CCCCCEEEEECCEEECCCCCCCEEEECCCEEEEEEECCCCEEEEEECCEEEEEEEEECCC ATDSVAAPTTGFVTSVSNADFSVPMNTAADGTQLTGSVDGMQGFQLTVDYN CCCCCCCCCCCEEEEECCCCEECCCCCCCCCCEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA