| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yfgM [H]
Identifier: 153948923
GI number: 153948923
Start: 1399602
End: 1400237
Strand: Direct
Name: yfgM [H]
Synonym: YpsIP31758_1188
Alternate gene names: 153948923
Gene position: 1399602-1400237 (Clockwise)
Preceding gene: 153949863
Following gene: 153948388
Centisome position: 29.63
GC content: 47.01
Gene sequence:
>636_bases GTGGAAGTCTATACCACTGAAAATGACCAGGTTGATGCAGTGCGCCGTTTCTTTAGTGAAAATGGTAAAGCACTGGCCGT GGGTGTGGTGCTCGGGATTGGTGCATTAGTGGGTTGGCGTTATTGGCAGGGTAATCAGAATACTGCCATGACGGAAGCCT CCTCTGCCTATCAGAAAGTCAGTACTGCTCTGTCAACTAACAGTGCGGGTAATGTTAGTGCTGATAGCATTGCTCTCGCT GAAAAGTTTGTTCAGAGCAATAAAAATAACTACGGCGTACTCGTCGGGTTAGAACTGGCTCATGATTTTGTTGAACAAAA TGCATTCGATAAAGCGGCACAGCAACTCAGTCAAGCCTTGGGCCAGACGAAAGATGAAAATCTGTTGTCGCTGATTAATC TGCGCCTTGCGCGTGTGCAACTGCAACTGAAAAAACCCGATGAAGCATTGAAAACGCTGGATGCAGTACAAGGTGATGGC TGGACAGCGATGGCTCAAGATGTTCGTGGCGATGCATTATTAAGCAAAGGTGATACCGCAGGTGCGCGCGCTGCTTATAG TAAAGCTATCGAATCTAATGCTTCTCAGGCGCTGCAAGCATTGTTGCGTATGAAACTGAATAACTTGTCCAGCTAA
Upstream 100 bases:
>100_bases GTCGTTGTAAAAGATTTGCGAAATGGTGAACAAGAAACGCTGGCGCAAGCGGATGTTGCTGCGCGTCTGGCTTTGATGTT GGGTTAAGGAGAGAGACACC
Downstream 100 bases:
>100_bases GGGGTATTCCCATGCAATTGCGTAAAACACTCTTAGTAGGACTGGTATCTGTTGCCCTATTGAGTGGTTGCTCACTGTTT AACAGTGAAGAAGATGTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTAMTEASSAYQKVSTALSTNSAGNVSADSIALA EKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDG WTAMAQDVRGDALLSKGDTAGARAAYSKAIESNASQALQALLRMKLNNLSS
Sequences:
>Translated_211_residues MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTAMTEASSAYQKVSTALSTNSAGNVSADSIALA EKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDG WTAMAQDVRGDALLSKGDTAGARAAYSKAIESNASQALQALLRMKLNNLSS >Mature_211_residues MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTAMTEASSAYQKVSTALSTNSAGNVSADSIALA EKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQALGQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDG WTAMAQDVRGDALLSKGDTAGARAAYSKAIESNASQALQALLRMKLNNLSS
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=210, Percent_Identity=57.1428571428571, Blast_Score=245, Evalue=2e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 22641; Mature: 22641
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTAMTEASSAYQKV CCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH STALSTNSAGNVSADSIALAEKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQAL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH GQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDGWTAMAQDVRGDALLSKGDTA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCC GARAAYSKAIESNASQALQALLRMKLNNLSS HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEVYTTENDQVDAVRRFFSENGKALAVGVVLGIGALVGWRYWQGNQNTAMTEASSAYQKV CCCCCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHH STALSTNSAGNVSADSIALAEKFVQSNKNNYGVLVGLELAHDFVEQNAFDKAAQQLSQAL HHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH GQTKDENLLSLINLRLARVQLQLKKPDEALKTLDAVQGDGWTAMAQDVRGDALLSKGDTA CCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCC GARAAYSKAIESNASQALQALLRMKLNNLSS HHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503; 9205837 [H]