Click here to switch to the map view.

The map label for this gene is 153948904

Identifier: 153948904

GI number: 153948904

Start: 4210791

End: 4211228

Strand: Reverse

Name: 153948904

Synonym: YpsIP31758_3735

Alternate gene names: NA

Gene position: 4211228-4210791 (Counterclockwise)

Preceding gene: 153949391

Following gene: 153947286

Centisome position: 89.16

GC content: 53.42

Gene sequence:

>438_bases
GTGGGCTATGCCATTGCAGTGATGACGATGGTTTTCGTGCTCATCGTCGGCCACGTTCAACTGCGGGAATCCACTGGCTA
TCAGTCGCGGGTTGTGAATCGAACCACAGATCGTTTGGCTGCTGACATGCTGCGATTGGCCAGTGTTGTAAATGATTGGC
GCTACCACCGCACTCTGGATGAAGGGGGACTAAATACTCGCCAGTTTGGCCTCGTTCCCTTACCGGACAGCCGTATCAGC
GCAGCTATACGACGCGGCCGTTTGTGGGTGTGGATACCTGAACAGCAGCAGTTAGTTGACAGCCTTAATCGCCAATCAGC
AAGTTCCGCTCTGGTGGGTACCGTTGCTGGTGGGCGGCTGCGAATGGTTGATGGAACTGACATGAATCTCTCTCTTCCCG
CCGGAGTGGCTGAAGGGAGTATTGTTTATCTTAATTAA

Upstream 100 bases:

>100_bases
ATTTTTGAGCTTTATCGTCAAGCAGACAAACCCTTGTTTGCGCAAGCCAGCCGCCCGCAATGTCTGGTCGTGGTTAGCGA
CATCCCTGGGGGGCTCTGAG

Downstream 100 bases:

>100_bases
GGGAAAAAGCTGGATGCATTGGTATTCCGTAGCCCGAACCTCGCGCCTCATTGGTGTGGTACTCAGTCTAAAATTTTTGA
TTGGCTGTTCACTTAGTGAA

Product: PilM protein

Products: NA

Alternate protein names: Type IV Pilus Operon Exported Poprotein

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MGYAIAVMTMVFVLIVGHVQLRESTGYQSRVVNRTTDRLAADMLRLASVVNDWRYHRTLDEGGLNTRQFGLVPLPDSRIS
AAIRRGRLWVWIPEQQQLVDSLNRQSASSALVGTVAGGRLRMVDGTDMNLSLPAGVAEGSIVYLN

Sequences:

>Translated_145_residues
MGYAIAVMTMVFVLIVGHVQLRESTGYQSRVVNRTTDRLAADMLRLASVVNDWRYHRTLDEGGLNTRQFGLVPLPDSRIS
AAIRRGRLWVWIPEQQQLVDSLNRQSASSALVGTVAGGRLRMVDGTDMNLSLPAGVAEGSIVYLN
>Mature_144_residues
GYAIAVMTMVFVLIVGHVQLRESTGYQSRVVNRTTDRLAADMLRLASVVNDWRYHRTLDEGGLNTRQFGLVPLPDSRISA
AIRRGRLWVWIPEQQQLVDSLNRQSASSALVGTVAGGRLRMVDGTDMNLSLPAGVAEGSIVYLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15985; Mature: 15853

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYAIAVMTMVFVLIVGHVQLRESTGYQSRVVNRTTDRLAADMLRLASVVNDWRYHRTLD
CCHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGGLNTRQFGLVPLPDSRISAAIRRGRLWVWIPEQQQLVDSLNRQSASSALVGTVAGGRL
CCCCCCCEECEEECCCHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCEE
RMVDGTDMNLSLPAGVAEGSIVYLN
EEECCCCCCEECCCCCCCCEEEEEC
>Mature Secondary Structure 
GYAIAVMTMVFVLIVGHVQLRESTGYQSRVVNRTTDRLAADMLRLASVVNDWRYHRTLD
CHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EGGLNTRQFGLVPLPDSRISAAIRRGRLWVWIPEQQQLVDSLNRQSASSALVGTVAGGRL
CCCCCCCEECEEECCCHHHHHHHHHCEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCEE
RMVDGTDMNLSLPAGVAEGSIVYLN
EEECCCCCCEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA