| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948677
Identifier: 153948677
GI number: 153948677
Start: 3088386
End: 3088841
Strand: Reverse
Name: 153948677
Synonym: YpsIP31758_2734
Alternate gene names: NA
Gene position: 3088841-3088386 (Counterclockwise)
Preceding gene: 153948231
Following gene: 153947301
Centisome position: 65.4
GC content: 53.51
Gene sequence:
>456_bases ATGACAACCGATATTAAGACCGTTTGGGATGTAAATGCCTTGCTGGGGGATTGGCAGACCGGTAACGGCGGCTTACTGGA GGGTGATGACTTGCAGACGGCTATTCTGCTGAGTTTATTCACCGACCGTTTAGCGCGGGCAGATGATGCGATTGATAGCC CTGATCGCCGTGGTTGGTGGGGTGACAGTGGTGCAGCATCGGCGATTGGCTCGCGGCTCTGGCTACTGCGGCGTGAGAAA CTCACCACACAAGTGGCTATCAAAGCGGAGGATTATGCCACAGAGGCGCTGGCATGGCTGATCGAAGATAGTGTGGTGGC CGCGATTAATGTCCGTGCGCACATTATCGCCCCCAACACCCTGGTGCTGGGGGTGAGTTACCAACAACCCAGCCAAACAC GATCAGCTAATCAAACACAGTCATCAATTAAATTTTCATGGGTATGGGAGGAGTAA
Upstream 100 bases:
>100_bases AAAGCTTACGTGACGCCTACAACAGCCACAATCATCAACTTAAAAACGTCCAGTCGGGCAGTACGACACTTACCAGTGAA ACGCCCGCTAAGGTGGTGCG
Downstream 100 bases:
>100_bases TTCATGCCATTTAATCGACCCACGTTAAGTGAATTGCGGCAGCGGAATCAGTCTTATATTCAATCAGAACTGAAAACCGG CGGCAATTTATTGCGTTTCT
Product: phage protein GP46
Products: NA
Alternate protein names: GP46 Family Protein; Tail Protein; Bacteriophage Protein GP; Bacteriophage Protein; Phage GP; Bacteriophage Related Protein; Mu-Like Prophage FluMu Protein; Mu-Like Phage Protein Gp; Phage Protein; Bacteriophage Mu-Like
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTTDIKTVWDVNALLGDWQTGNGGLLEGDDLQTAILLSLFTDRLARADDAIDSPDRRGWWGDSGAASAIGSRLWLLRREK LTTQVAIKAEDYATEALAWLIEDSVVAAINVRAHIIAPNTLVLGVSYQQPSQTRSANQTQSSIKFSWVWEE
Sequences:
>Translated_151_residues MTTDIKTVWDVNALLGDWQTGNGGLLEGDDLQTAILLSLFTDRLARADDAIDSPDRRGWWGDSGAASAIGSRLWLLRREK LTTQVAIKAEDYATEALAWLIEDSVVAAINVRAHIIAPNTLVLGVSYQQPSQTRSANQTQSSIKFSWVWEE >Mature_150_residues TTDIKTVWDVNALLGDWQTGNGGLLEGDDLQTAILLSLFTDRLARADDAIDSPDRRGWWGDSGAASAIGSRLWLLRREKL TTQVAIKAEDYATEALAWLIEDSVVAAINVRAHIIAPNTLVLGVSYQQPSQTRSANQTQSSIKFSWVWEE
Specific function: Unknown
COG id: COG4381
COG function: function code S; Mu-like prophage protein gp46
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16658; Mature: 16527
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDIKTVWDVNALLGDWQTGNGGLLEGDDLQTAILLSLFTDRLARADDAIDSPDRRGWW CCCCCCHHEEHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GDSGAASAIGSRLWLLRREKLTTQVAIKAEDYATEALAWLIEDSVVAAINVRAHIIAPNT CCCCHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHCCEEEEEEEEEEEECCCE LVLGVSYQQPSQTRSANQTQSSIKFSWVWEE EEEEEECCCCCCCCCCCCCCCCEEEEEEECC >Mature Secondary Structure TTDIKTVWDVNALLGDWQTGNGGLLEGDDLQTAILLSLFTDRLARADDAIDSPDRRGWW CCCCCHHEEHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GDSGAASAIGSRLWLLRREKLTTQVAIKAEDYATEALAWLIEDSVVAAINVRAHIIAPNT CCCCHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHCCEEEEEEEEEEEECCCE LVLGVSYQQPSQTRSANQTQSSIKFSWVWEE EEEEEECCCCCCCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA