| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is wzyE
Identifier: 153948608
GI number: 153948608
Start: 216987
End: 218351
Strand: Direct
Name: wzyE
Synonym: YpsIP31758_0192
Alternate gene names: 153948608
Gene position: 216987-218351 (Clockwise)
Preceding gene: 153950283
Following gene: 153946840
Centisome position: 4.59
GC content: 48.06
Gene sequence:
>1365_bases ATGACGCTGGGGCAATTTGGCGGTCTATTTTGTATTTATTTGATAGCAGTCATTTTTATTCTGACACTAACCTATCAGGA ATTTCGGCGGGTTAAGTTTAACTTTAACGTTTTGTTTTCAATGCTTTATCTGTTGACCTTCTATTTTGGTTTCCCACTGA CTTGTATGCTGGTATTTCAGTTTGGGGTGGCGGTGGTGCCGGTTGAGTATTTGTTGTACGCCATGCTGTCTGCTACGGCC TTTTATGGCATTTACTATGTCACCTATAAAACACGGTTGCGTCAGCCTCGTAGCCAGCCGCGCACGCCAATATTCACCAT GAACCGGGTAGAAACTAATCTGACCTGGGTGCTACTGGCACTGGTCGCGGTAGGGACCGTCGGCATCTTCTTTATGCAAA ACGGTTTCTTGCTGTTTAAGCTGGATTCCTACAGCAAAATATTCTCCAGTGATGTCTCTGGTGTCGCCCTGAAGCGTTTT TTCTACTTCTTTATCCCGGCAATGCTGGTGGTCTATTTCCTCAAGCAGGATATGCGGGCCTGGTTCTTCTTCCTTGCCAG CACGGTGGCGTTTGGCATTCTAACTTATGTCATCGTTGGTGGGACGCGTGCCAATATCATTATCGCGTTCTCATTGTTCC TGTTTATCGGTATCGTCCGTGGATGGATAACCCTGTGGATGCTAGCGGCGGCAGGTGTCTTCGGGATTGTCGGTATGTTC TGGCTGGCCCTTAAGCGTTATGGCCTGGATGTGAACGGTGCAGAGGCATTTTACACCTTCCTCTATTTGACGCGGGACAC CTTCTCGCCTTGGGAAAACCTCGGGTTATTGCTACAGAACTACGACAAAATAGATTTCCAGGGGCTGGCACCGATTGTCC GTGATTTTTATGTCTTTATTCCAAGCGCGCTGTGGCCAGAACGCCCGGATTTGGTACTGAATACCGCCAATTACTTTACC TGGGACGTTTTGGACAATCACTCTGGGCTGGCTATCTCGCCAACGCTGATTGGTTCTCTGGTGGTCATGGGGGGGGTATT GTTTATCCCGCTGGGGGCCATTGTTGTGGGGCTTATCATCAAATGGTTCGATTGGTTGTATGAACAAGGCAAGGCCGAGA GTAATCGCTATAAAGCGGCGATCCTGCAAAGCTTCTGTTTTGGGGCGGTGTTTAATATCATTGTCTTGGCACGTGAAGGG CTGGATTCCTTTGTCTCACGAGTGGTATTTTTCTGCGTTATCTTTGGTGCCTGTCTGGTACTGGCAAAATTGTTGTACTG GTTGTTCGATACGGCGGGTTTGATAAAGCGTCAGGGGATTAAATCCAACCGATTATCAATGCCTAACGCGGGCAATCAAC TGTAA
Upstream 100 bases:
>100_bases GTCAACTGGCAGGGTTAGATAAACAAGCGATCGCTTTCTTCAATCCAAATTATATTGAGGGCTGGAAGCAAGCGTTGGCT CTGGCAGCGGGGGAACACCC
Downstream 100 bases:
>100_bases GGATTGTAATGGAACCCAATACTGTCATTCCAAAATATAATGTCCGTGGCTTTGAAATCTGGGGTTTTCGTGACATGGCT CAGGTGCTGGATCATCTACT
Product: common antigen polymerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MTLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQFGVAVVPVEYLLYAMLSATA FYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLALVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRF FYFFIPAMLVVYFLKQDMRAWFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFT WDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLIIKWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREG LDSFVSRVVFFCVIFGACLVLAKLLYWLFDTAGLIKRQGIKSNRLSMPNAGNQL
Sequences:
>Translated_454_residues MTLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQFGVAVVPVEYLLYAMLSATA FYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLALVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRF FYFFIPAMLVVYFLKQDMRAWFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFT WDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLIIKWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREG LDSFVSRVVFFCVIFGACLVLAKLLYWLFDTAGLIKRQGIKSNRLSMPNAGNQL >Mature_453_residues TLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQFGVAVVPVEYLLYAMLSATAF YGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLALVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRFF YFFIPAMLVVYFLKQDMRAWFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMFW LALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFIPSALWPERPDLVLNTANYFTW DVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLIIKWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREGL DSFVSRVVFFCVIFGACLVLAKLLYWLFDTAGLIKRQGIKSNRLSMPNAGNQL
Specific function: Could be involved in ECA polysaccharide chain elongation
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the wzyE family
Homologues:
Organism=Escherichia coli, GI2367288, Length=445, Percent_Identity=77.9775280898876, Blast_Score=665, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): WZYE_YERP3 (A7FD61)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001399189.1 - STRING: A7FD61 - GeneID: 5387597 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_0192 - NMPDR: fig|349747.3.peg.2350 - eggNOG: NOG04329 - HOGENOM: HBG296659 - OMA: QAFCFGA - ProtClustDB: PRK02975 - BioCyc: YPSE349747:YPSIP31758_0192-MONOMER - HAMAP: MF_01003 - InterPro: IPR010691
Pfam domain/function: PF06899 WzyE
EC number: NA
Molecular weight: Translated: 51659; Mature: 51528
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1c967980)-; HASH(0x1c2b66c8)-; HASH(0x1d3befd0)-; HASH(0x1cc18b40)-; HASH(0x1cd2599c)-; HASH(0x1c1af2e8)-; HASH(0x1d2e5b8c)-; HASH(0x1c28d030)-; HASH(0x1c1fee70)-; HASH(0x1cdbffec)-; HASH(0x1c0842dc)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVAVVPVEYLLYAMLSATAFYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHH LVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRFFYFFIPAMLVVYFLKQDMRA HHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFI HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH PSALWPERPDLVLNTANYFTWDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLII CHHCCCCCCCEEEECCCEEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREGLDSFVSRVVFFCVIFGACLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKLLYWLFDTAGLIKRQGIKSNRLSMPNAGNQL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH >Mature Secondary Structure TLGQFGGLFCIYLIAVIFILTLTYQEFRRVKFNFNVLFSMLYLLTFYFGFPLTCMLVFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGVAVVPVEYLLYAMLSATAFYGIYYVTYKTRLRQPRSQPRTPIFTMNRVETNLTWVLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHH LVAVGTVGIFFMQNGFLLFKLDSYSKIFSSDVSGVALKRFFYFFIPAMLVVYFLKQDMRA HHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH WFFFLASTVAFGILTYVIVGGTRANIIIAFSLFLFIGIVRGWITLWMLAAAGVFGIVGMF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLALKRYGLDVNGAEAFYTFLYLTRDTFSPWENLGLLLQNYDKIDFQGLAPIVRDFYVFI HHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH PSALWPERPDLVLNTANYFTWDVLDNHSGLAISPTLIGSLVVMGGVLFIPLGAIVVGLII CHHCCCCCCCEEEECCCEEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH KWFDWLYEQGKAESNRYKAAILQSFCFGAVFNIIVLAREGLDSFVSRVVFFCVIFGACLV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAKLLYWLFDTAGLIKRQGIKSNRLSMPNAGNQL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA