| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948408
Identifier: 153948408
GI number: 153948408
Start: 491461
End: 494124
Strand: Reverse
Name: 153948408
Synonym: YpsIP31758_0416
Alternate gene names: NA
Gene position: 494124-491461 (Counterclockwise)
Preceding gene: 153947294
Following gene: 153950211
Centisome position: 10.46
GC content: 39.38
Gene sequence:
>2664_bases ATGCAAGATAATATCGGCCATACTGCATCCGTTATCACGGATACTGATAATGCGATCCATCAGCTAAAAATCACTAACCT CAATAATATTTTTGATGTCGCGGCTGAAAGTGAAGCGCAATTCATTGAAAAGGTGGTTAACGCCAGTGATGATAAAAAAG GAGCAACAGAACCTGAATTAACTGAAAAAGCCAAAACTCTCTATCAACGGGCTAAAGCGGAGGTAGCTCACCACCAGGCC GCCAGACGAGCAAAACAGTTGCGTCAGGATCCGGTACTCAGTCGCATCAACAAATTGGCCTTTCCAACTGAGCCAGAAAT GCCAATAGCAAAACTACAAGTAAAACCCCGAGCCAAAATGGCCCATTCGCTAGTTGATCAAATACCGGAGCGGGTAAAAG AATATACCGATCCGGTATCCATCCAATCATTGTTCTCTCCAGGTCGCTATTTATGCAAATTATATAATGTGGCAAAAGAG TTACATGAAGATGGAAACAAACTGCATATCGATCAACGTCGCCCTGATTTAAAAGATTTGGTGCTCAGTGATAGCAATAT GAACCAAGACGTCTCTTCACTGGATATCTTACTGAATGTACTACAAACGAAGGCACCTCTGGCTGAGCTGACTAAAGATA CCGAGGCACACGCAAATGACGTTTCTTTCACCCTGCCTTATGACGATAACCTAACGGTTATTAATGCGGTGCTACAGGAT AAATCAACTAGCCTGCGAGAAATTGCAGCCCTGTTAGCAGAGAATAATGATCCATGGGCTAATCCCATTACCCCCGCGTT AGTACAAGAACAACTCGGGCTGAACCCGGCCAGTTATGCATTAATTGATATAAAATCCCCATTGGATGAGAGCTGCGCCA AACGCCTGGCACATGCCACGCAACTCAGCGTTGAACAACTGCAATGGCTTAATAAAAATGCCATTGAAAGTAGCAGTGAT AAAGATAGCCCCCTCAGACCCGAAATACTCACGATCATCTCCGAGTATCGCCGTTTACATCAGCGTTACGGCCTGTCTGT CGATCCGTTTATCGCCATTATTAATGCCGTTAACACCACCCATACCAACGAAAATAAAACCAGTTTCTTCCAGCAGATTT TCTCTACCCTTGATGTAGATGCAGGATTTAACTTCCTTGATCAGGGTTCGTGGGAAGTGATTATCCGCAAGGCATTGGGC ATTACTGCCGAAGAACTGTTACGTATTGCGGAATATTGCTTTGGTAAGAGTTCAATTAGCAACGTAAAGATGAATAGTAA AAAATTCAGCCAATTATACCGTATGGCAATGATCCCCCGCACACTTGGTGTGAGTTTCTCGCAAGCTGAATATCTCTGGC AGTTATATAGCAAGCCAGATGAAAATATTATGGAAAGAATAGCCCAAGGCAAGGCTATGACCATTATTAATGCCATTACT GTGCTAGAAAATACCCTTCAATGGATGAGTCAGCAGAAACTTGATGTGATCACACTGCAAGCTATGCTCACCAAGCAATA CAGCACGGCAGCGACCCCTGAATTATTTAATTTCTTATCCAACATTTATCAAACCTTAGGTAAGCAAGTTTATTCCGAAT CGCTCAAACCTAATCTGTATCGCAGCTTGGCAAACGGGTTCCACCTAAAAGCTAATGTGGTCGCAGGGCTGGTCAATTGG TTAGCAAAAAATGACACTGAATTTACCTTAGAAAGCTTTTGGCAAAATATTGCCATGACCTTTGCTGAAGAGCCTTCATT GCACCAACTGGAAGTTCATCAGCCCTTGATTATCCAATGCCAAAAACTGAGCCAATATGTATTAATTGCGCAATGGGCAA TGTTGTCTGAACAAGAGATAGAATTAATTTTATTACCCAATGGCATTGATAATAGAGGTAGTGCCCCTTCTCCAAGTATC ACGCTGTTAAAGTTATTATCTGAATTTAAGTTATGGCAACAAGAGGCTGAGGTGTCGCAAAGCGAATTATTCGACATTAT GCAAGAGCTGATTACTGGTACAAATGAAAAACAAGAAAACTTAAGAAATGCAGCCGAAAAAGTACTAAGAACAATAGCAA AAAACATTGGCTTTATAAATAGTGATATAGATAGAACTGATTCAACCATAAATATTAGAAATGGTAGCGCAACACTGTTC CCCCCAGAACACCCCATGTATAAAGCACTTAAAATTGAAGTATCAAACCTTGAAAAATCAAAAATTCAGTTAGAAGGTAA AAAGAAAGAAGAGGAGATAAAACTAGAACAGGCCAAAGACAATATACAGTCACTAATTAATAATTGGGACAGTGAAATAA TCATACGTTTGGCAGACGCATACCATTGGGATATAAACATTGCTAATAGTATGTTTATACTTATTTTTGGCGAAAAGATA AACTTCACTTTCCATTATGAGAATAGAAATGATTATCATTATGAAGAACACTATGGTTATCGTTTTGAACAAAAACCAAT GTATAGTTTTGATAAAAAATTAACTAATGGGTTTGAATCAATCGTATCATTGAAAAATCATATTTATATCGCTGAAAAAT TAAAAGTCCATCCAGGAACCCTAATTAAAATAAAAAACTATATTTTTGATGATAAGAATAACGAGTTAGAGGATATCGCC AACAAGCTAATAGTTAATCTTTAA
Upstream 100 bases:
>100_bases CCCAAGGAGCTTACACAGCCAAATTATTCGGGTGAATATATACAATGAACACCAGCGACTTAAAACTCCAAGGTAATATC CCTAAATATAGAGGTAAATT
Downstream 100 bases:
>100_bases AAAACGTTATCACACCCCAATTTAATAGGAAAAATAATTATGCCTACTAGCACTGTATTAAATAAAATTAACGAATCGCG CCGCGACGCATTGGTTAACT
Product: insecticial toxin complex protein
Products: NA
Alternate protein names: Insecticidal xin Complex Protein TcaA; Insecticial xin; A Component Of Insecticidal xin Complex; Xin A; Insecticial xin Complex Protein
Number of amino acids: Translated: 887; Mature: 887
Protein sequence:
>887_residues MQDNIGHTASVITDTDNAIHQLKITNLNNIFDVAAESEAQFIEKVVNASDDKKGATEPELTEKAKTLYQRAKAEVAHHQA ARRAKQLRQDPVLSRINKLAFPTEPEMPIAKLQVKPRAKMAHSLVDQIPERVKEYTDPVSIQSLFSPGRYLCKLYNVAKE LHEDGNKLHIDQRRPDLKDLVLSDSNMNQDVSSLDILLNVLQTKAPLAELTKDTEAHANDVSFTLPYDDNLTVINAVLQD KSTSLREIAALLAENNDPWANPITPALVQEQLGLNPASYALIDIKSPLDESCAKRLAHATQLSVEQLQWLNKNAIESSSD KDSPLRPEILTIISEYRRLHQRYGLSVDPFIAIINAVNTTHTNENKTSFFQQIFSTLDVDAGFNFLDQGSWEVIIRKALG ITAEELLRIAEYCFGKSSISNVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYSKPDENIMERIAQGKAMTIINAIT VLENTLQWMSQQKLDVITLQAMLTKQYSTAATPELFNFLSNIYQTLGKQVYSESLKPNLYRSLANGFHLKANVVAGLVNW LAKNDTEFTLESFWQNIAMTFAEEPSLHQLEVHQPLIIQCQKLSQYVLIAQWAMLSEQEIELILLPNGIDNRGSAPSPSI TLLKLLSEFKLWQQEAEVSQSELFDIMQELITGTNEKQENLRNAAEKVLRTIAKNIGFINSDIDRTDSTINIRNGSATLF PPEHPMYKALKIEVSNLEKSKIQLEGKKKEEEIKLEQAKDNIQSLINNWDSEIIIRLADAYHWDINIANSMFILIFGEKI NFTFHYENRNDYHYEEHYGYRFEQKPMYSFDKKLTNGFESIVSLKNHIYIAEKLKVHPGTLIKIKNYIFDDKNNELEDIA NKLIVNL
Sequences:
>Translated_887_residues MQDNIGHTASVITDTDNAIHQLKITNLNNIFDVAAESEAQFIEKVVNASDDKKGATEPELTEKAKTLYQRAKAEVAHHQA ARRAKQLRQDPVLSRINKLAFPTEPEMPIAKLQVKPRAKMAHSLVDQIPERVKEYTDPVSIQSLFSPGRYLCKLYNVAKE LHEDGNKLHIDQRRPDLKDLVLSDSNMNQDVSSLDILLNVLQTKAPLAELTKDTEAHANDVSFTLPYDDNLTVINAVLQD KSTSLREIAALLAENNDPWANPITPALVQEQLGLNPASYALIDIKSPLDESCAKRLAHATQLSVEQLQWLNKNAIESSSD KDSPLRPEILTIISEYRRLHQRYGLSVDPFIAIINAVNTTHTNENKTSFFQQIFSTLDVDAGFNFLDQGSWEVIIRKALG ITAEELLRIAEYCFGKSSISNVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYSKPDENIMERIAQGKAMTIINAIT VLENTLQWMSQQKLDVITLQAMLTKQYSTAATPELFNFLSNIYQTLGKQVYSESLKPNLYRSLANGFHLKANVVAGLVNW LAKNDTEFTLESFWQNIAMTFAEEPSLHQLEVHQPLIIQCQKLSQYVLIAQWAMLSEQEIELILLPNGIDNRGSAPSPSI TLLKLLSEFKLWQQEAEVSQSELFDIMQELITGTNEKQENLRNAAEKVLRTIAKNIGFINSDIDRTDSTINIRNGSATLF PPEHPMYKALKIEVSNLEKSKIQLEGKKKEEEIKLEQAKDNIQSLINNWDSEIIIRLADAYHWDINIANSMFILIFGEKI NFTFHYENRNDYHYEEHYGYRFEQKPMYSFDKKLTNGFESIVSLKNHIYIAEKLKVHPGTLIKIKNYIFDDKNNELEDIA NKLIVNL >Mature_887_residues MQDNIGHTASVITDTDNAIHQLKITNLNNIFDVAAESEAQFIEKVVNASDDKKGATEPELTEKAKTLYQRAKAEVAHHQA ARRAKQLRQDPVLSRINKLAFPTEPEMPIAKLQVKPRAKMAHSLVDQIPERVKEYTDPVSIQSLFSPGRYLCKLYNVAKE LHEDGNKLHIDQRRPDLKDLVLSDSNMNQDVSSLDILLNVLQTKAPLAELTKDTEAHANDVSFTLPYDDNLTVINAVLQD KSTSLREIAALLAENNDPWANPITPALVQEQLGLNPASYALIDIKSPLDESCAKRLAHATQLSVEQLQWLNKNAIESSSD KDSPLRPEILTIISEYRRLHQRYGLSVDPFIAIINAVNTTHTNENKTSFFQQIFSTLDVDAGFNFLDQGSWEVIIRKALG ITAEELLRIAEYCFGKSSISNVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYSKPDENIMERIAQGKAMTIINAIT VLENTLQWMSQQKLDVITLQAMLTKQYSTAATPELFNFLSNIYQTLGKQVYSESLKPNLYRSLANGFHLKANVVAGLVNW LAKNDTEFTLESFWQNIAMTFAEEPSLHQLEVHQPLIIQCQKLSQYVLIAQWAMLSEQEIELILLPNGIDNRGSAPSPSI TLLKLLSEFKLWQQEAEVSQSELFDIMQELITGTNEKQENLRNAAEKVLRTIAKNIGFINSDIDRTDSTINIRNGSATLF PPEHPMYKALKIEVSNLEKSKIQLEGKKKEEEIKLEQAKDNIQSLINNWDSEIIIRLADAYHWDINIANSMFILIFGEKI NFTFHYENRNDYHYEEHYGYRFEQKPMYSFDKKLTNGFESIVSLKNHIYIAEKLKVHPGTLIKIKNYIFDDKNNELEDIA NKLIVNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101017; Mature: 101017
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDNIGHTASVITDTDNAIHQLKITNLNNIFDVAAESEAQFIEKVVNASDDKKGATEPEL CCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHH TEKAKTLYQRAKAEVAHHQAARRAKQLRQDPVLSRINKLAFPTEPEMPIAKLQVKPRAKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHEECCCHHHH AHSLVDQIPERVKEYTDPVSIQSLFSPGRYLCKLYNVAKELHEDGNKLHIDQRRPDLKDL HHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH VLSDSNMNQDVSSLDILLNVLQTKAPLAELTKDTEAHANDVSFTLPYDDNLTVINAVLQD HCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHC KSTSLREIAALLAENNDPWANPITPALVQEQLGLNPASYALIDIKSPLDESCAKRLAHAT CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHH QLSVEQLQWLNKNAIESSSDKDSPLRPEILTIISEYRRLHQRYGLSVDPFIAIINAVNTT HHHHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC HTNENKTSFFQQIFSTLDVDAGFNFLDQGSWEVIIRKALGITAEELLRIAEYCFGKSSIS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC NVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYSKPDENIMERIAQGKAMTIINAIT CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH VLENTLQWMSQQKLDVITLQAMLTKQYSTAATPELFNFLSNIYQTLGKQVYSESLKPNLY HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH RSLANGFHLKANVVAGLVNWLAKNDTEFTLESFWQNIAMTFAEEPSLHQLEVHQPLIIQC HHHHCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHH QKLSQYVLIAQWAMLSEQEIELILLPNGIDNRGSAPSPSITLLKLLSEFKLWQQEAEVSQ HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH SELFDIMQELITGTNEKQENLRNAAEKVLRTIAKNIGFINSDIDRTDSTINIRNGSATLF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEC PPEHPMYKALKIEVSNLEKSKIQLEGKKKEEEIKLEQAKDNIQSLINNWDSEIIIRLADA CCCCCCHHHHEEEHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCC YHWDINIANSMFILIFGEKINFTFHYENRNDYHYEEHYGYRFEQKPMYSFDKKLTNGFES EEEEEEECCCEEEEEEECEEEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH IVSLKNHIYIAEKLKVHPGTLIKIKNYIFDDKNNELEDIANKLIVNL HHHHHHCEEEEHEEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MQDNIGHTASVITDTDNAIHQLKITNLNNIFDVAAESEAQFIEKVVNASDDKKGATEPEL CCCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCHH TEKAKTLYQRAKAEVAHHQAARRAKQLRQDPVLSRINKLAFPTEPEMPIAKLQVKPRAKM HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHEECCCHHHH AHSLVDQIPERVKEYTDPVSIQSLFSPGRYLCKLYNVAKELHEDGNKLHIDQRRPDLKDL HHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHH VLSDSNMNQDVSSLDILLNVLQTKAPLAELTKDTEAHANDVSFTLPYDDNLTVINAVLQD HCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHC KSTSLREIAALLAENNDPWANPITPALVQEQLGLNPASYALIDIKSPLDESCAKRLAHAT CCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHHHHHH QLSVEQLQWLNKNAIESSSDKDSPLRPEILTIISEYRRLHQRYGLSVDPFIAIINAVNTT HHHHHHHHHHCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC HTNENKTSFFQQIFSTLDVDAGFNFLDQGSWEVIIRKALGITAEELLRIAEYCFGKSSIS CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC NVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYSKPDENIMERIAQGKAMTIINAIT CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHH VLENTLQWMSQQKLDVITLQAMLTKQYSTAATPELFNFLSNIYQTLGKQVYSESLKPNLY HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH RSLANGFHLKANVVAGLVNWLAKNDTEFTLESFWQNIAMTFAEEPSLHQLEVHQPLIIQC HHHHCCCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHH QKLSQYVLIAQWAMLSEQEIELILLPNGIDNRGSAPSPSITLLKLLSEFKLWQQEAEVSQ HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH SELFDIMQELITGTNEKQENLRNAAEKVLRTIAKNIGFINSDIDRTDSTINIRNGSATLF HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCEEEC PPEHPMYKALKIEVSNLEKSKIQLEGKKKEEEIKLEQAKDNIQSLINNWDSEIIIRLADA CCCCCCHHHHEEEHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCC YHWDINIANSMFILIFGEKINFTFHYENRNDYHYEEHYGYRFEQKPMYSFDKKLTNGFES EEEEEEECCCEEEEEEECEEEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHH IVSLKNHIYIAEKLKVHPGTLIKIKNYIFDDKNNELEDIANKLIVNL HHHHHHCEEEEHEEEECCCCEEEEEHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA