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The map label for this gene is yedE [H]

Identifier: 153948170

GI number: 153948170

Start: 4295081

End: 4296295

Strand: Reverse

Name: yedE [H]

Synonym: YpsIP31758_3810

Alternate gene names: 153948170

Gene position: 4296295-4295081 (Counterclockwise)

Preceding gene: 153948750

Following gene: 153949748

Centisome position: 90.96

GC content: 52.18

Gene sequence:

>1215_bases
ATGAGCTGGCCCGAGTTTAAATCTCAATATCTGGTGCGCTTTTGGGCACCTTTACCTGCGGTTATTGCTGCCGGTATCTT
AGCGACCTATTACTTTGGTTTGACTGGCACGTTCTGGGCGGTCACTGGTGAGTTTACTCGCTGGGGGGGCCATATTATGC
AATTGTTTGGTGCGCAGCCACAGGAGTGGGGCTATTTTAAAGTGATCGGTCTGGAAGGAACGCCACTGGATCGTATCGAT
GGCATGATGATTATCGGTATGTTCGCCGGTTGTATCGCTGCGGCACTCTGGGCTAACAATATTAAGTTACGTAAGCCGCA
ACACACTATCCGCATTGCACAGGCGCTGGTGGGGGGCATAATTGCTGGTTTTGGTGCCCGTCTGGCGATGGGGTGCAATT
TAGCCGCCTTCTTTACCGGCATTCCGCAATTTTCACTGCACGCGTGGTTTTTTGCACTAGCGACGGCGGCGGGCTCTTAC
TTTGGGGCCAAATTTACGCTGCTCCCCCTGTTCCGCATTCCGATTAAACTACAAAAAGTGACTGCAGCCTCACCACTGAC
GCAGCACCCGGCCAGAGCGGCACGCCGTTTCCGTCTGGGAATGGTGGTCTTAGTTCTGGCGCTTGGCTGGTCCCTGATTG
AGTTGTTCCGTCAGCCTAAATTGGGGATTGCCATGCTGTGCGGGATTGGCTTTGGGCTCCTGATTGAACGTGCTCAGATT
TGCTTTACCTCCGCTTTTCGTGACTTGTGGATAACCGGGCGCACCCATATGGCTAAGGCCATTATTCTAGGGATGGCGGT
CAGTACTATCGGCATTTTCAGCTACGTCCAATTGGGCGTCGAACCTAAAATTCTGTGGGCTGGGCCAAATGCGGTAATAG
GTGGTTTACTGTTTGGTTTTGGTATCGTGCTGGCGGGTGGCTGTGAAACCGGTTGGATGTACCGTGCGGTGGAAGGGCAA
ATTCATTATTGGTGGGTGGGATTGGGCAATATTATCGGCGCAACTCTCTTGGCCTACTACTGGGATGATTTCGCCCCTGC
GTTGGCGACCAATTACGATAAAGTTAACCTGTTGGAGACGTTCGGACCGATGGGCGGGTTGCTGGTGACTTACCTAATGT
TGGCATTAGCATTTGCCGCCATGCTGTGGTGGGAGAAGCGTTTCTTTCGCAAACAAAAAGCGACAATCTCGGCCCTGATT
AAGGAATCCTTATGA

Upstream 100 bases:

>100_bases
ATAACCTCAGGCTTATTATATAAGCCTATTTTCTCTGTTACCTTTTATACCTTGATATTATTAATGTTATCGGTAATAGC
CTGCTTTTGGAGGTGCCGGT

Downstream 100 bases:

>100_bases
GCCATTCTCCATCCGTAGAAACACCCCAACTGGCAGCGCCTATTGTGCCTGATTATCGCCTCGATATGGTGGGCGAGCCG
TGCCCGTATCCTGCGGTTGC

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSWPEFKSQYLVRFWAPLPAVIAAGILATYYFGLTGTFWAVTGEFTRWGGHIMQLFGAQPQEWGYFKVIGLEGTPLDRID
GMMIIGMFAGCIAAALWANNIKLRKPQHTIRIAQALVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSY
FGAKFTLLPLFRIPIKLQKVTAASPLTQHPARAARRFRLGMVVLVLALGWSLIELFRQPKLGIAMLCGIGFGLLIERAQI
CFTSAFRDLWITGRTHMAKAIILGMAVSTIGIFSYVQLGVEPKILWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQ
IHYWWVGLGNIIGATLLAYYWDDFAPALATNYDKVNLLETFGPMGGLLVTYLMLALAFAAMLWWEKRFFRKQKATISALI
KESL

Sequences:

>Translated_404_residues
MSWPEFKSQYLVRFWAPLPAVIAAGILATYYFGLTGTFWAVTGEFTRWGGHIMQLFGAQPQEWGYFKVIGLEGTPLDRID
GMMIIGMFAGCIAAALWANNIKLRKPQHTIRIAQALVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSY
FGAKFTLLPLFRIPIKLQKVTAASPLTQHPARAARRFRLGMVVLVLALGWSLIELFRQPKLGIAMLCGIGFGLLIERAQI
CFTSAFRDLWITGRTHMAKAIILGMAVSTIGIFSYVQLGVEPKILWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQ
IHYWWVGLGNIIGATLLAYYWDDFAPALATNYDKVNLLETFGPMGGLLVTYLMLALAFAAMLWWEKRFFRKQKATISALI
KESL
>Mature_403_residues
SWPEFKSQYLVRFWAPLPAVIAAGILATYYFGLTGTFWAVTGEFTRWGGHIMQLFGAQPQEWGYFKVIGLEGTPLDRIDG
MMIIGMFAGCIAAALWANNIKLRKPQHTIRIAQALVGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSYF
GAKFTLLPLFRIPIKLQKVTAASPLTQHPARAARRFRLGMVVLVLALGWSLIELFRQPKLGIAMLCGIGFGLLIERAQIC
FTSAFRDLWITGRTHMAKAIILGMAVSTIGIFSYVQLGVEPKILWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQI
HYWWVGLGNIIGATLLAYYWDDFAPALATNYDKVNLLETFGPMGGLLVTYLMLALAFAAMLWWEKRFFRKQKATISALIK
ESL

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=391, Percent_Identity=79.539641943734, Blast_Score=628, Evalue=0.0,
Organism=Escherichia coli, GI1788323, Length=102, Percent_Identity=41.1764705882353, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44459; Mature: 44328

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWPEFKSQYLVRFWAPLPAVIAAGILATYYFGLTGTFWAVTGEFTRWGGHIMQLFGAQP
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
QEWGYFKVIGLEGTPLDRIDGMMIIGMFAGCIAAALWANNIKLRKPQHTIRIAQALVGGI
CCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSYFGAKFTLLPLFRIPIKLQKV
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHHCCEEEEHH
TAASPLTQHPARAARRFRLGMVVLVLALGWSLIELFRQPKLGIAMLCGIGFGLLIERAQI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
CFTSAFRDLWITGRTHMAKAIILGMAVSTIGIFSYVQLGVEPKILWAGPNAVIGGLLFGF
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
GIVLAGGCETGWMYRAVEGQIHYWWVGLGNIIGATLLAYYWDDFAPALATNYDKVNLLET
HHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FGPMGGLLVTYLMLALAFAAMLWWEKRFFRKQKATISALIKESL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SWPEFKSQYLVRFWAPLPAVIAAGILATYYFGLTGTFWAVTGEFTRWGGHIMQLFGAQP
CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
QEWGYFKVIGLEGTPLDRIDGMMIIGMFAGCIAAALWANNIKLRKPQHTIRIAQALVGGI
CCCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSYFGAKFTLLPLFRIPIKLQKV
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHCHHCCCHHHHHHHHHCCEEEEHH
TAASPLTQHPARAARRFRLGMVVLVLALGWSLIELFRQPKLGIAMLCGIGFGLLIERAQI
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
CFTSAFRDLWITGRTHMAKAIILGMAVSTIGIFSYVQLGVEPKILWAGPNAVIGGLLFGF
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
GIVLAGGCETGWMYRAVEGQIHYWWVGLGNIIGATLLAYYWDDFAPALATNYDKVNLLET
HHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FGPMGGLLVTYLMLALAFAAMLWWEKRFFRKQKATISALIKESL
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]