| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153948159
Identifier: 153948159
GI number: 153948159
Start: 959627
End: 960685
Strand: Direct
Name: 153948159
Synonym: YpsIP31758_0797
Alternate gene names: NA
Gene position: 959627-960685 (Clockwise)
Preceding gene: 153949179
Following gene: 153948096
Centisome position: 20.32
GC content: 40.04
Gene sequence:
>1059_bases ATGGCAAAAGGTTATTACCTTGGTGTTGGGGATCAAACAACCTGTGGTGGCGTGATCATCGAAGGTGATGCCACTCATAT CCTGATGGGCAAAGCCGTGGCCCGTGAGCAAGATAGAGTAACCTGCGGCAAGCATCCGGGAACTTATATCATTGTCGGCC ACATTCCCGGTGATTCTATTCATGGCCGTAAGTTTGCTGGCACCTTGAATAGTCAAAGCAATTGCCCGTGCAAGGCGTGG TTTATTCCTTCTTTGGTGCATGATACGTATGAGTTTGGTGCAAGAAGTAAATCACAAAATATGTCTGAAATTAGTACTGA AGTCGAACGTGAGATGGTAGAAAATGTGAGTGAATCAGAAGAAAAATCTAAAGTTGTCTGTGCCCATATTGATGGCGCTT TAGTAGTAGCGAGTTATATCCTTGATGAAATAAAGAAAAATGTAAAAAGTGATACCGCTGATAAAATCAGATCTTTTATC GATAATGACCTCTATAAAAAAAGACTTAAGGAGTGGCAGGATTCTCCTTGGTACGCGAGAATGAATGCACCTCCACAGCC TGAAATAATATCGGCATCGGTTTTATGGTTTATGGCGGTCAAGAGTGGTGCTAAATGGGATCATAAACCTAAAATTAGAG ATCAATTTAAAGCATATGCAGTTTCTCGTCCTCTGGTCGGAAGCGGAACCCGATCAAAAAGCTATTTTCATAAATATGAA GAACATGATTATTTTTATGATGTCTGGTCCAATATTCACTATGGTTATGTAGGCTTAAGTCTTGGTTTTGATGAGTCATA TTTATTACTTGGCTCAACTCTTGAGCAAGTAAGAACCAGCATCGGGAGTAAACCAGATCCTATAGATGATATTACATGTA TGAAAATTGGCTATGCACTCTATCATCAACATGGAAAATATGCTGAGACGTTAGATGTCAGGCATATACTCGATGCTCTT GAATCAGCATCGGACCTTGATCTAGCTATTTCAAGACAAATTCATTGGTGTTGGAATAATGATAATTCGAGTCAAATTGA TCACCCGCAGGGTAAGTAA
Upstream 100 bases:
>100_bases CCCGCCTGCATATCGAAATGGAAAGCTTGCTCAGTGGGCTTATGGCCCTCGACCCGGCCCGTGCGGCCGTATTATGCGGA TAACCGAAAAGGAATAGACA
Downstream 100 bases:
>100_bases TGAAAAGAATAATAATGGTTGTTACGATTTTTATCGTATTAGGAATTATTTCTATCACTGTTTTTTATTTTGTTAAGCCT TCTATTTTTCTTTATAATAA
Product: PAAR domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MAKGYYLGVGDQTTCGGVIIEGDATHILMGKAVAREQDRVTCGKHPGTYIIVGHIPGDSIHGRKFAGTLNSQSNCPCKAW FIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFI DNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETLDVRHILDAL ESASDLDLAISRQIHWCWNNDNSSQIDHPQGK
Sequences:
>Translated_352_residues MAKGYYLGVGDQTTCGGVIIEGDATHILMGKAVAREQDRVTCGKHPGTYIIVGHIPGDSIHGRKFAGTLNSQSNCPCKAW FIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFI DNDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETLDVRHILDAL ESASDLDLAISRQIHWCWNNDNSSQIDHPQGK >Mature_351_residues AKGYYLGVGDQTTCGGVIIEGDATHILMGKAVAREQDRVTCGKHPGTYIIVGHIPGDSIHGRKFAGTLNSQSNCPCKAWF IPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESEEKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFID NDLYKKRLKEWQDSPWYARMNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYEE HDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYALYHQHGKYAETLDVRHILDALE SASDLDLAISRQIHWCWNNDNSSQIDHPQGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39636; Mature: 39505
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGYYLGVGDQTTCGGVIIEGDATHILMGKAVAREQDRVTCGKHPGTYIIVGHIPGDSI CCCCEEEECCCCCCCCCEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC HGRKFAGTLNSQSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESE CCCEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH EKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFIDNDLYKKRLKEWQDSPWYAR HHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYAL CCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YHQHGKYAETLDVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK HHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AKGYYLGVGDQTTCGGVIIEGDATHILMGKAVAREQDRVTCGKHPGTYIIVGHIPGDSI CCCEEEECCCCCCCCCEEECCCCCEEEHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCC HGRKFAGTLNSQSNCPCKAWFIPSLVHDTYEFGARSKSQNMSEISTEVEREMVENVSESE CCCEEEECCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH EKSKVVCAHIDGALVVASYILDEIKKNVKSDTADKIRSFIDNDLYKKRLKEWQDSPWYAR HHCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE MNAPPQPEIISASVLWFMAVKSGAKWDHKPKIRDQFKAYAVSRPLVGSGTRSKSYFHKYE CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHH EHDYFYDVWSNIHYGYVGLSLGFDESYLLLGSTLEQVRTSIGSKPDPIDDITCMKIGYAL CCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH YHQHGKYAETLDVRHILDALESASDLDLAISRQIHWCWNNDNSSQIDHPQGK HHCCCCHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA