Click here to switch to the map view.

The map label for this gene is aguA

Identifier: 153948095

GI number: 153948095

Start: 1010465

End: 1011562

Strand: Reverse

Name: aguA

Synonym: YpsIP31758_0832

Alternate gene names: 153948095

Gene position: 1011562-1010465 (Counterclockwise)

Preceding gene: 153948185

Following gene: 153947334

Centisome position: 21.42

GC content: 52.82

Gene sequence:

>1098_bases
ATGTTACAACAACAGGCATTACCCGGCACACCGCGGCAGGATGGTTTCTTTATGCCTGCAGAATGGGCACCGCAGGATGC
GGTATGGATGCTTTGGCCATATCGTCAGGATAACTGGCGCGGCAAAGCTATTCCCGCTCAGCAGACATTCGCCAAAGTCG
CCGAGGCCATTAGCCGTGCTACGCCAGTCTTTATGGGCGTTCCCGCCGAGTTTATGGCACAAGCCAAGGCAACCATGCCG
GCGAATGTGACCTTAGTGGAAATGGCCAGTGACGATGCCTGGATGCGTGATACAGGCCCGACGATGGTGATAAATGGGGC
GGCCGAGCGCCGGGCCGTTGACTGGCAGTTTAATGCATGGGGCGGCCTGAACGGTGGCTTGTATGCTGACTGGCAACAAG
ATGAAAAAGTTGCCGTTCAAGTCAGTGATTTTCTGAAAAACGCGCATTACAGTGCACCGTTGATACTGGAAGGTGGCTCC
ATTCATACTGATGGCGAAGGCACGTTACTCACCACTGCTGAATGTTTGCTAAACCCGAATCGCAACCCACATTTGAATCA
AGCGCAAATCGAACAGTTACTGTGTGACTATCTGGGGGTGACTCACTTCATTTGGTTGCAAGATGGCGTGTATAACGATG
AGACCGATGGTCATATCGATAATATGTGCTGTTTTGTCCGCCCAGGCGAAGTAGCCCTGCATTGGACAGACGACCAGCAG
GATCCACAGTATGCACGTTCAGTCGCAGCGTTCGAGGTGTTATCCAATACCGTCGATGCCAAAGGGCGTAAACTGAAAAT
CTGGAAGTTACCGGCTCCCGGCCCGCTTTATAACACGGAAGAGGAAACCTTCGATGTGTTGACCAGCGATGCGGTTCCCC
GCACGGCGGGTGAACGCCTGGCGGGCTCTTATGTCAACTTCCTGATCAGTAACCAGCAAATTATTTTCCCACTGCTGGAT
AGCCGCACTGACGGGCAGGCTAACGATCTGTTACAACAAATGTTCCCCGGCTACGCAATTGTCGGCGTGCCTGCCAGAGA
GATTTTACTCGGTGGCGGTAACATACATTGCATTACTCAGCAGATCCCAGCGGCTTAA

Upstream 100 bases:

>100_bases
TTCATGGGGCTTGTTCCGTGATCGCCGCCCAGAGATGTACCAAACATTAGCCACGTCAGACGGCAAGACCCGGAGATAAT
TTATGTCGGTGCAAGACACG

Downstream 100 bases:

>100_bases
TCCGCACAAAAATAAGCCGCCTGCTTGACCCGGATCATCCGATCCGGGTTAATTTATTGCATCACCTTCTCCCTTGAAAT
AACTACAGTGTCAGCGGTGC

Product: agmatine deiminase

Products: NA

Alternate protein names: Agmatine iminohydrolase

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQAKATMP
ANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGS
IHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALHWTDDQQ
DPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERLAGSYVNFLISNQQIIFPLLD
SRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQQIPAA

Sequences:

>Translated_365_residues
MLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQAKATMP
ANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGS
IHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALHWTDDQQ
DPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERLAGSYVNFLISNQQIIFPLLD
SRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQQIPAA
>Mature_365_residues
MLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRATPVFMGVPAEFMAQAKATMP
ANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAWGGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGS
IHTDGEGTLLTTAECLLNPNRNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALHWTDDQQ
DPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERLAGSYVNFLISNQQIIFPLLD
SRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQQIPAA

Specific function: Unknown

COG id: COG2957

COG function: function code E; Peptidylarginine deiminase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the agmatine deiminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): AGUA_YERP3 (A7FEY8)

Other databases:

- EMBL:   CP000720
- RefSeq:   YP_001399816.1
- ProteinModelPortal:   A7FEY8
- SMR:   A7FEY8
- STRING:   A7FEY8
- GeneID:   5387885
- GenomeReviews:   CP000720_GR
- KEGG:   ypi:YpsIP31758_0832
- eggNOG:   COG2957
- HOGENOM:   HBG668771
- OMA:   FLIVNGG
- ProtClustDB:   PRK13551
- BioCyc:   YPSE349747:YPSIP31758_0832-MONOMER
- HAMAP:   MF_01841
- InterPro:   IPR017754
- InterPro:   IPR007466
- TIGRFAMs:   TIGR03380

Pfam domain/function: PF04371 PAD_porph

EC number: =3.5.3.12

Molecular weight: Translated: 40377; Mature: 40377

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: ACT_SITE 357-357

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRA
CCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
TPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAW
CCEEEECCHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCEEEEEEEECC
GGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAECLLNPN
CCCCCCEEECCCCCCEEEEEHHHHHHCCCCCCCEEEECCEEEECCCCCEEEEEHHHCCCC
RNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALHWTDDQQ
CCCCCCHHHHHHHHHHHHCHHEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCC
DPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERL
CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH
AGSYVNFLISNQQIIFPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQ
HHHHHHEEECCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHEEECCCCEEEEEC
QIPAA
CCCCC
>Mature Secondary Structure
MLQQQALPGTPRQDGFFMPAEWAPQDAVWMLWPYRQDNWRGKAIPAQQTFAKVAEAISRA
CCCCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHC
TPVFMGVPAEFMAQAKATMPANVTLVEMASDDAWMRDTGPTMVINGAAERRAVDWQFNAW
CCEEEECCHHHHHHHHCCCCCCEEEEEECCCCCEEECCCCEEEEECCCCCEEEEEEEECC
GGLNGGLYADWQQDEKVAVQVSDFLKNAHYSAPLILEGGSIHTDGEGTLLTTAECLLNPN
CCCCCCEEECCCCCCEEEEEHHHHHHCCCCCCCEEEECCEEEECCCCCEEEEEHHHCCCC
RNPHLNQAQIEQLLCDYLGVTHFIWLQDGVYNDETDGHIDNMCCFVRPGEVALHWTDDQQ
CCCCCCHHHHHHHHHHHHCHHEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEECCCCC
DPQYARSVAAFEVLSNTVDAKGRKLKIWKLPAPGPLYNTEEETFDVLTSDAVPRTAGERL
CHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCHHHHH
AGSYVNFLISNQQIIFPLLDSRTDGQANDLLQQMFPGYAIVGVPAREILLGGGNIHCITQ
HHHHHHEEECCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCHHHEEECCCCEEEEEC
QIPAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA