| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947981
Identifier: 153947981
GI number: 153947981
Start: 757487
End: 758500
Strand: Direct
Name: 153947981
Synonym: YpsIP31758_0650
Alternate gene names: NA
Gene position: 757487-758500 (Clockwise)
Preceding gene: 153947262
Following gene: 153950229
Centisome position: 16.04
GC content: 50.39
Gene sequence:
>1014_bases ATGCAGGTAGGACTCAATAGAACGCAATGGGAGGTGGCGAATAAAACCAGCCTCCCGGATTTCGACCGGCTTCAGGGCGC TAATTCACTTCCTTTGATTAAAAAAGAGGTCGATTTCCCTGAGTCACCTTTTATTTCCAGCCAGCCACTGCGTTATAACG TACAACTTAATCGGCAACTGACTGCACTACAACGGGCTGAAGGGTATTTACATACGACTGAACGGCAGGTGGCACAATTG CAACGTGCGCTGCAACAAGAACGCGCGGAGACAGAAATCAAACCCCTGGCATTAAAAACCTTACATTGGCTGCAACAACG CACCGCGATGTCAGGTAATGCCGTTGATCGGCAACTTAATTTTGTGCCAGAGCAACGTACTGAGGTTAATTTCGCTTTGC ACGGAGCCGAGCAGCTTTTGCAACCAGCAGAAAGTGAAACGCTGTTATTTTCGCTGACAGGTCATGGATATAACGTTGTG GCGGTCAACTTACCGGCTTATGCATCGCCGGCACAAAATCTTTTACGTTTAAATAATGGGTTAGGGCGTTTAGGGATCCA CGGGCGGCTGGATCCGCAGGGGAATGCACAATTTCATGTGGATGAAAAGCGCTGGGCAGAGATAGAGGCCCATCTTCAGG TCCGGGGTGGCGGGTTACGTTTTGCCAAAGAGCGCTTCCAACCGTTGAAATTACAGCCAGAAGTGGTGCTGGAAGATCGG GTGCGTGATATTGCTGCGAAGCCGCAGGAAGCCAAAAAACACCTGGCGGGTATTCAGCAAGCGATGGGACAGATTACCGG GCAGATGAGTAAATTGAGCGAGCATAAGAGAAATACCGGGGTGCAAATTAATAGCATGTCCAGTTTCTCTGCGCCCAATT CTGCGTTGGTGGCCGCTGAAGCCTTGGCTGAAAAGTTACTGCAAGGGCGCTCCCAGTATGCGATGTGGGCCAATATGTTA ACGGCGCAGGGCAATGCACGCAGCGCTATGGTAAGAAACTTATTGGGCGGTTGA
Upstream 100 bases:
>100_bases TGGAATTAATGAACCTCATGGCGGTGACCAATGCCAACTATACGACGTTTAAACAGATTAATAGCTTGTCTCTTTTTAAC TTAATTTAAGCTGGGATGTT
Downstream 100 bases:
>100_bases GGAGGGGGAATACGGCTGCAACTGCAAGTACCCCAACGTACTTGGTGTTGCAGCAAGGTAAACATTACCCGTTATTCTTC AAGCTGCATGTGCGTTGATC
Product: flagellar hook associated protein lafW
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MQVGLNRTQWEVANKTSLPDFDRLQGANSLPLIKKEVDFPESPFISSQPLRYNVQLNRQLTALQRAEGYLHTTERQVAQL QRALQQERAETEIKPLALKTLHWLQQRTAMSGNAVDRQLNFVPEQRTEVNFALHGAEQLLQPAESETLLFSLTGHGYNVV AVNLPAYASPAQNLLRLNNGLGRLGIHGRLDPQGNAQFHVDEKRWAEIEAHLQVRGGGLRFAKERFQPLKLQPEVVLEDR VRDIAAKPQEAKKHLAGIQQAMGQITGQMSKLSEHKRNTGVQINSMSSFSAPNSALVAAEALAEKLLQGRSQYAMWANML TAQGNARSAMVRNLLGG
Sequences:
>Translated_337_residues MQVGLNRTQWEVANKTSLPDFDRLQGANSLPLIKKEVDFPESPFISSQPLRYNVQLNRQLTALQRAEGYLHTTERQVAQL QRALQQERAETEIKPLALKTLHWLQQRTAMSGNAVDRQLNFVPEQRTEVNFALHGAEQLLQPAESETLLFSLTGHGYNVV AVNLPAYASPAQNLLRLNNGLGRLGIHGRLDPQGNAQFHVDEKRWAEIEAHLQVRGGGLRFAKERFQPLKLQPEVVLEDR VRDIAAKPQEAKKHLAGIQQAMGQITGQMSKLSEHKRNTGVQINSMSSFSAPNSALVAAEALAEKLLQGRSQYAMWANML TAQGNARSAMVRNLLGG >Mature_337_residues MQVGLNRTQWEVANKTSLPDFDRLQGANSLPLIKKEVDFPESPFISSQPLRYNVQLNRQLTALQRAEGYLHTTERQVAQL QRALQQERAETEIKPLALKTLHWLQQRTAMSGNAVDRQLNFVPEQRTEVNFALHGAEQLLQPAESETLLFSLTGHGYNVV AVNLPAYASPAQNLLRLNNGLGRLGIHGRLDPQGNAQFHVDEKRWAEIEAHLQVRGGGLRFAKERFQPLKLQPEVVLEDR VRDIAAKPQEAKKHLAGIQQAMGQITGQMSKLSEHKRNTGVQINSMSSFSAPNSALVAAEALAEKLLQGRSQYAMWANML TAQGNARSAMVRNLLGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37541; Mature: 37541
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVGLNRTQWEVANKTSLPDFDRLQGANSLPLIKKEVDFPESPFISSQPLRYNVQLNRQL CCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHH TALQRAEGYLHTTERQVAQLQRALQQERAETEIKPLALKTLHWLQQRTAMSGNAVDRQLN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHC FVPEQRTEVNFALHGAEQLLQPAESETLLFSLTGHGYNVVAVNLPAYASPAQNLLRLNNG CCCCCCCEEEEEEECHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCC LGRLGIHGRLDPQGNAQFHVDEKRWAEIEAHLQVRGGGLRFAKERFQPLKLQPEVVLEDR CCCCCCCCCCCCCCCCEEEECHHHHHEEEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHH VRDIAAKPQEAKKHLAGIQQAMGQITGQMSKLSEHKRNTGVQINSMSSFSAPNSALVAAE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHH ALAEKLLQGRSQYAMWANMLTAQGNARSAMVRNLLGG HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCC >Mature Secondary Structure MQVGLNRTQWEVANKTSLPDFDRLQGANSLPLIKKEVDFPESPFISSQPLRYNVQLNRQL CCCCCCCCCEEECCCCCCCCHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHH TALQRAEGYLHTTERQVAQLQRALQQERAETEIKPLALKTLHWLQQRTAMSGNAVDRQLN HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHC FVPEQRTEVNFALHGAEQLLQPAESETLLFSLTGHGYNVVAVNLPAYASPAQNLLRLNNG CCCCCCCEEEEEEECHHHHHCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCC LGRLGIHGRLDPQGNAQFHVDEKRWAEIEAHLQVRGGGLRFAKERFQPLKLQPEVVLEDR CCCCCCCCCCCCCCCCEEEECHHHHHEEEEEEEEECCCHHHHHHCCCCCCCCCHHHHHHH VRDIAAKPQEAKKHLAGIQQAMGQITGQMSKLSEHKRNTGVQINSMSSFSAPNSALVAAE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHH ALAEKLLQGRSQYAMWANMLTAQGNARSAMVRNLLGG HHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA