| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is flgL [H]
Identifier: 153947262
GI number: 153947262
Start: 756558
End: 757475
Strand: Direct
Name: flgL [H]
Synonym: YpsIP31758_0649
Alternate gene names: 153947262
Gene position: 756558-757475 (Clockwise)
Preceding gene: 153949847
Following gene: 153947981
Centisome position: 16.02
GC content: 38.34
Gene sequence:
>918_bases ATGAGAATCAGCACGCCAACCATGTCCTCTGCGATGAATAAGTTTATTACTCAACGTCATGAGAGTCTCGATAAAATAAA CAAACAAATGATGACGCAACAGCGTATTACTTTGCCATCGGAAGATCCTATAGCGAGTACGCGGTTATTACAGATAAACC GTGAACAAGCGAACATTAAGCAATATACCGGTAATATTGATGGGTTATCTAACAGCCTAACTCATCAGGTTGGGCATGTC TCTGCTATCAATACACAGTTGGTTGCGATAAAAGACAGGCTGTTATCCATCAGTAACGATGTTAAAAGTAATAAAGATAT CTCTGGGGTTGCTGATGAAATGAATTATATGCTGGAAGCTGTGGTGGCAGAGTTAAATGCCAAAAATAGTGAAGGGCGCT ATTTGTTTGCAGGGACGGCAAGTAATACTAAGCCAATTACCTTTGACAGAAATAATAATACTTATACATTTGTCGGTAAT AGTAAGAACCGCCAAACTGGCGTTGGTGAGGGCGTAAAAATCACTGAGAACGTGCATTTACAGTCTGGCTTTACTGATGT CAATGGGGATTTAGCGACACTAAATAAGTTAAAAAAATTATGTGATGATATTAAACAGAATACCTTGCCATCGACCAGTC ATACCACCGCAATTAATGAAATGATGGGGTTAATTGACAGTGCCTCTGATCATATGGGGGTAACATTAACCGAGTTAGGC ATAAGGCAGACGCATGGTAAATTACTGCAAAAAAATCATGAGGAAATGGAACTGTCTAATATTACTATCAAAGAAAATTT GGTTGGCCTGGATTTAGCTGAGTCTTATATGGAATTAATGAACCTCATGGCGGTGACCAATGCCAACTATACGACGTTTA AACAGATTAATAGCTTGTCTCTTTTTAACTTAATTTAA
Upstream 100 bases:
>100_bases TATCAATCCAATATGAAAGTCATCGCGACCGGAGATAAATTATTCTCTGATCTTTTAGCTTTAATCTAATTATCACACCC TAAATAACAAAGGAATTCTG
Downstream 100 bases:
>100_bases GCTGGGATGTTATGCAGGTAGGACTCAATAGAACGCAATGGGAGGTGGCGAATAAAACCAGCCTCCCGGATTTCGACCGG CTTCAGGGCGCTAATTCACT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MRISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQYTGNIDGLSNSLTHQVGHV SAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEAVVAELNAKNSEGRYLFAGTASNTKPITFDRNNNTYTFVGN SKNRQTGVGEGVKITENVHLQSGFTDVNGDLATLNKLKKLCDDIKQNTLPSTSHTTAINEMMGLIDSASDHMGVTLTELG IRQTHGKLLQKNHEEMELSNITIKENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFNLI
Sequences:
>Translated_305_residues MRISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQYTGNIDGLSNSLTHQVGHV SAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEAVVAELNAKNSEGRYLFAGTASNTKPITFDRNNNTYTFVGN SKNRQTGVGEGVKITENVHLQSGFTDVNGDLATLNKLKKLCDDIKQNTLPSTSHTTAINEMMGLIDSASDHMGVTLTELG IRQTHGKLLQKNHEEMELSNITIKENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFNLI >Mature_305_residues MRISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIKQYTGNIDGLSNSLTHQVGHV SAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEAVVAELNAKNSEGRYLFAGTASNTKPITFDRNNNTYTFVGN SKNRQTGVGEGVKITENVHLQSGFTDVNGDLATLNKLKKLCDDIKQNTLPSTSHTTAINEMMGLIDSASDHMGVTLTELG IRQTHGKLLQKNHEEMELSNITIKENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLSLFNLI
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=163, Percent_Identity=25.1533742331288, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 33813; Mature: 33813
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00041 HTH_ARAC_FAMILY_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHH QYTGNIDGLSNSLTHQVGHVSAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEA HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVAELNAKNSEGRYLFAGTASNTKPITFDRNNNTYTFVGNSKNRQTGVGEGVKITENVHL HHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEE QSGFTDVNGDLATLNKLKKLCDDIKQNTLPSTSHTTAINEMMGLIDSASDHMGVTLTELG ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHH IRQTHGKLLQKNHEEMELSNITIKENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLS HHHHHHHHHHCCCHHHHHHCEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCH LFNLI HHHCC >Mature Secondary Structure MRISTPTMSSAMNKFITQRHESLDKINKQMMTQQRITLPSEDPIASTRLLQINREQANIK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHH QYTGNIDGLSNSLTHQVGHVSAINTQLVAIKDRLLSISNDVKSNKDISGVADEMNYMLEA HHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VVAELNAKNSEGRYLFAGTASNTKPITFDRNNNTYTFVGNSKNRQTGVGEGVKITENVHL HHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEE QSGFTDVNGDLATLNKLKKLCDDIKQNTLPSTSHTTAINEMMGLIDSASDHMGVTLTELG ECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHH IRQTHGKLLQKNHEEMELSNITIKENLVGLDLAESYMELMNLMAVTNANYTTFKQINSLS HHHHHHHHHHCCCHHHHHHCEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCH LFNLI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2193164; 11677609 [H]