| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is yfjG [H]
Identifier: 153947960
GI number: 153947960
Start: 3262857
End: 3263291
Strand: Reverse
Name: yfjG [H]
Synonym: YpsIP31758_2892
Alternate gene names: 153947960
Gene position: 3263291-3262857 (Counterclockwise)
Preceding gene: 153950374
Following gene: 153949790
Centisome position: 69.09
GC content: 43.91
Gene sequence:
>435_bases ATGCCACAGATTAGCCGATCTGCACTGGTTCCGTTCAGTGTAGAACAGATGTATCAACTCGTTAATGATGTTCGTTCTTA CCCAGAGTTTTTACCCGGTTGTACCGGTAGCCGGGTACTTGATGCCACTGAAAATGAAATGATAGCCGCCGTGGATGTCG CCAAGGCCGGGATAAGTAAAACATTTACTACACGCAATACGCTAACAGATAACCAGAGTATCAATATGCAGTTGGTGGAT GGGCCGTTTCGTAAATTAATGGGCGGATGGCATTTTACACCACTAAGTGCAGATGCTTGCAAAGTTGAATTGCATCTTGA TTTTGAATTTACAAATAAGCTGATTGAATTGGCATTCGGTAAAATATTCAAGGAGTTGGCTGGGAATATGGTGCAGGCTT TCACTCAACGGGCTAAAGAGGTCTACAGTGCCTGA
Upstream 100 bases:
>100_bases GTATTTTGTCTCATTTGTTGCGAGGAATGCCTGGCAGATTTTTTGTCTGGCGGTAGATAAATGGTATTATCAGTGCGTTT TATGTCTCACAGGAAATGTT
Downstream 100 bases:
>100_bases TATTCGCGTTGAGGTTGTATATGCCTTACCTGAACGCCAATACTTGCGCACTGTATCTTTGGTGGTTGGCAGTACTGTTG AGGATGCGATCAAGGCATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MPQISRSALVPFSVEQMYQLVNDVRSYPEFLPGCTGSRVLDATENEMIAAVDVAKAGISKTFTTRNTLTDNQSINMQLVD GPFRKLMGGWHFTPLSADACKVELHLDFEFTNKLIELAFGKIFKELAGNMVQAFTQRAKEVYSA
Sequences:
>Translated_144_residues MPQISRSALVPFSVEQMYQLVNDVRSYPEFLPGCTGSRVLDATENEMIAAVDVAKAGISKTFTTRNTLTDNQSINMQLVD GPFRKLMGGWHFTPLSADACKVELHLDFEFTNKLIELAFGKIFKELAGNMVQAFTQRAKEVYSA >Mature_143_residues PQISRSALVPFSVEQMYQLVNDVRSYPEFLPGCTGSRVLDATENEMIAAVDVAKAGISKTFTTRNTLTDNQSINMQLVDG PFRKLMGGWHFTPLSADACKVELHLDFEFTNKLIELAFGKIFKELAGNMVQAFTQRAKEVYSA
Specific function: Unknown
COG id: COG2867
COG function: function code I; Oligoketide cyclase/lipid transport protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0083 family [H]
Homologues:
Organism=Escherichia coli, GI1788972, Length=144, Percent_Identity=79.8611111111111, Blast_Score=253, Evalue=4e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005031 [H]
Pfam domain/function: PF03364 Polyketide_cyc [H]
EC number: NA
Molecular weight: Translated: 16058; Mature: 15926
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQISRSALVPFSVEQMYQLVNDVRSYPEFLPGCTGSRVLDATENEMIAAVDVAKAGISK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEHHHHHHHHCCHH TFTTRNTLTDNQSINMQLVDGPFRKLMGGWHFTPLSADACKVELHLDFEFTNKLIELAFG HHCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHH KIFKELAGNMVQAFTQRAKEVYSA HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PQISRSALVPFSVEQMYQLVNDVRSYPEFLPGCTGSRVLDATENEMIAAVDVAKAGISK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCEEHHHHHHHHCCHH TFTTRNTLTDNQSINMQLVDGPFRKLMGGWHFTPLSADACKVELHLDFEFTNKLIELAFG HHCCCCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHH KIFKELAGNMVQAFTQRAKEVYSA HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7524073; 9205837; 9278503 [H]