Click here to switch to the map view.

The map label for this gene is tfaE [H]

Identifier: 153947916

GI number: 153947916

Start: 2518391

End: 2519047

Strand: Reverse

Name: tfaE [H]

Synonym: YpsIP31758_2197

Alternate gene names: 153947916

Gene position: 2519047-2518391 (Counterclockwise)

Preceding gene: 153947852

Following gene: 153948927

Centisome position: 53.33

GC content: 49.77

Gene sequence:

>657_bases
ATGACGACAGTAATTAAAACCCCGGCGGTACTGAATAAAAGCAACCAGGCCCAACTTGCAGGTTGGGTAACTGTATTTAA
TATTCATCCTGATAGCCGAGAGTATCTTTCCAGTGTGGAAGAATATTTGGCCGAGGGCGTCGGCATTCCAGCCAATACCT
ATTTAGATAAGTCACTCAAAGCCAAAAAAGGTTTTGCTGTGTGCCGTAGTGCCGATAATAGCCAGTGGGAATATTTGCCT
GATCACCGGGGGGAAACCCGCTATAGCACAATAACCGGTGCGACCACTACCCTGAGTGAGATTGGCGACTATCCGGCAGA
TACCACCGAACTGGCGCCAACAACAACCTTTGATCAATGGGATGGTACCCGGTGGGTAACAGATAAGGACCGAGTAGCAG
CCGTTGCTCGCCGGTACAGAGATGCCTTTATCGAAGCCACTGATCCCATGATGGTCAGCGACTACTCGATTGATGATATG
CCACTGACATCAGAACAACGGCGTGAATTAGCCGAAACCCGTTTAGCGTTTAAAACGTGGCCGACACAGGAGAACTGGCC
ACGAATTGAATTGCCTGATATCCCTTACTGGCTCCTGATCGAAGCGGTTAATCAGGGTTACCGGGTACCTGTTTGGCCTG
CTGGTCCGGCTGAATAA

Upstream 100 bases:

>100_bases
GGATCACTGCTGGCGTAAGTTCAATACGTTACGAATGGTATGCCTACCTGTCTACTCGGCCTCGTAACATTGCATTTAAC
TACATTGTGAGGGCAAGATA

Downstream 100 bases:

>100_bases
CAGTATCGTTAACTTGCCAGCGAATCTTACTTTTATATTGTCTTCAGCAAACTTCTGGTTTGTCGGTAGTCAGATGATAG
GGGAACTCCACTTCTAGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MTTVIKTPAVLNKSNQAQLAGWVTVFNIHPDSREYLSSVEEYLAEGVGIPANTYLDKSLKAKKGFAVCRSADNSQWEYLP
DHRGETRYSTITGATTTLSEIGDYPADTTELAPTTTFDQWDGTRWVTDKDRVAAVARRYRDAFIEATDPMMVSDYSIDDM
PLTSEQRRELAETRLAFKTWPTQENWPRIELPDIPYWLLIEAVNQGYRVPVWPAGPAE

Sequences:

>Translated_218_residues
MTTVIKTPAVLNKSNQAQLAGWVTVFNIHPDSREYLSSVEEYLAEGVGIPANTYLDKSLKAKKGFAVCRSADNSQWEYLP
DHRGETRYSTITGATTTLSEIGDYPADTTELAPTTTFDQWDGTRWVTDKDRVAAVARRYRDAFIEATDPMMVSDYSIDDM
PLTSEQRRELAETRLAFKTWPTQENWPRIELPDIPYWLLIEAVNQGYRVPVWPAGPAE
>Mature_217_residues
TTVIKTPAVLNKSNQAQLAGWVTVFNIHPDSREYLSSVEEYLAEGVGIPANTYLDKSLKAKKGFAVCRSADNSQWEYLPD
HRGETRYSTITGATTTLSEIGDYPADTTELAPTTTFDQWDGTRWVTDKDRVAAVARRYRDAFIEATDPMMVSDYSIDDMP
LTSEQRRELAETRLAFKTWPTQENWPRIELPDIPYWLLIEAVNQGYRVPVWPAGPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tfa family [H]

Homologues:

Organism=Escherichia coli, GI1787402, Length=169, Percent_Identity=45.5621301775148, Blast_Score=137, Evalue=5e-34,
Organism=Escherichia coli, GI1787637, Length=156, Percent_Identity=28.8461538461538, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI2367120, Length=156, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003458 [H]

Pfam domain/function: PF02413 Caudo_TAP [H]

EC number: NA

Molecular weight: Translated: 24700; Mature: 24569

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVIKTPAVLNKSNQAQLAGWVTVFNIHPDSREYLSSVEEYLAEGVGIPANTYLDKSLK
CCCEECCCHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AKKGFAVCRSADNSQWEYLPDHRGETRYSTITGATTTLSEIGDYPADTTELAPTTTFDQW
HHCCHHEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DGTRWVTDKDRVAAVARRYRDAFIEATDPMMVSDYSIDDMPLTSEQRRELAETRLAFKTW
CCCEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PTQENWPRIELPDIPYWLLIEAVNQGYRVPVWPAGPAE
CCCCCCCEEECCCCCHHHHHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure 
TTVIKTPAVLNKSNQAQLAGWVTVFNIHPDSREYLSSVEEYLAEGVGIPANTYLDKSLK
CCEECCCHHHCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AKKGFAVCRSADNSQWEYLPDHRGETRYSTITGATTTLSEIGDYPADTTELAPTTTFDQW
HHCCHHEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCC
DGTRWVTDKDRVAAVARRYRDAFIEATDPMMVSDYSIDDMPLTSEQRRELAETRLAFKTW
CCCEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCC
PTQENWPRIELPDIPYWLLIEAVNQGYRVPVWPAGPAE
CCCCCCCEEECCCCCHHHHHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3894006; 9278503 [H]