| Definition | Yersinia pseudotuberculosis IP 31758, complete genome. |
|---|---|
| Accession | NC_009708 |
| Length | 4,723,306 |
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The map label for this gene is 153947874
Identifier: 153947874
GI number: 153947874
Start: 2795909
End: 2798269
Strand: Direct
Name: 153947874
Synonym: YpsIP31758_2476
Alternate gene names: NA
Gene position: 2795909-2798269 (Clockwise)
Preceding gene: 153948145
Following gene: 153948431
Centisome position: 59.19
GC content: 36.55
Gene sequence:
>2361_bases ATGCTTACGAGTGAATTTTTAAACGATGTAAAGCTCAGCCCCATGGCAACACTATTAGCCATTATTATAACCGCTATAGG GATGATCTCACTGTTTCTCGTATTACTGCTTTATTTAACTGATCATAGTATTGAAAAATTCCATCATGATTATCCACAAA TTTATCGAATAGAAACACAATTTAATCTGCCCAATGGTGAAAAAGTTAAGTCGGCACAAGTCCCTTTGCCATTAATTACT GCATTACAAAATGAAAAAAACATCAAAGATGTCGCCTACGCTTTACGCTTGTTTATCGACTTACAGGTTAACGGTAAAAC ACAGGCTGACGTAGAAATTTATGCTGTTAGCCCTAATTTTTTAACGGCGCTCAATCCCTATCGACAGAAAATACCTCATC TGTCACACAATGAAATTATCATTACGCCTGAGTTTAATCGCCAATATCTTCATTTAAACCACCCTAAAGGCCAGGTCATC ACGTTAGGAAAAAAAGGGAAATTCGTTATCAAAGATGTGGTTAACTTAAATACGTCCAGCCGCTTTAACACCCGCGCTGT CATTGCATTTTCTCCGGATATCATCGATGACTACCATGATAAAAGGCATGACTGGTACGATATGCACAGCTATCTCTTTG TCACCATGGTCGCCGGGGAAAAACCCACTCATGAGCAGTTAAAAACGCTGGTCACCCGGTATGCACCTCAACTCCCTGGC GCTCCGTTTAGCCCTGAAGAGTTTATTCAATTATCCGCCCGCAATATTACCGATATACATTATGATGCTGAACTCCCCGA TGAAATGAGCACAGTTATTTCAAAATCATATCTTTATACCTTGTATATGGCGGGTTTCTTTATCTTTTTAACCACCACCA TGAACTTTTTCAATGTTAATAACATCGTAAATAAAAACAAAAAAAGCAGTTTTCAGATAAAGAAATCGGTTGGTGCCTCT AATTATCAATTACTGACAGAGTCATTTTTCATCGCAACACTGCAAGCGGTGTGTGTCCTCACACTGGCGTTTATCTTCCT CTCAATTTTGATGCAAGCATCTGAAAATGTCAGGGAATTGATTTTAACGCAAGAAATAGGCCGGCTAATATCATCATTTT CTGTAGCGTTCTTCTCACTCTATATTGCGATACTAATTTCGCATTACCTCTATCTATCAACCTCAGTTTTCCCTAATAAG TCATGGCATAATCATGCTTATAGTGCACACCCAATATCACATTACATTTACCAAGTAACGTTATCTATACAAATAGCCAT AGCAGGAATCATTATTTATCTTTGGGCAGGCATAATGACACAAATAGATTTTATGCAGAGTCATACGTTTGGTTATGAAA AAGAAAATGTCGTGACATTTCCACTAAGCGATGAATTAAAATCTTTAACATCATTAAATAGCTTACAAGATGAATTAAAT AATAGCATAGGTATCTTCCCAATCGCATTGAGTAGTTGGCGACCATTTGATATGTCAAGAACGACGACTTCGGTTTTTCA TCAAAATCAGCAGGAGCAAGATAAACTCGTTTCCGTAAATATACTGAACGTGAACAAAAACTTCACCGACACTTGGGGAA TAAAAACATTAGCAGGCTACGAAAACCCTATTACACCCAGTAAAAATGATAATACTTATCATGCTATAGCGACAAAGACC TTTATGTCGGCGATGGGGAAATCATCAAGTGATGAGGTACTGAATACTCTTTTTTATATTAACGACAATGATGCTGAATA TACAGTTCGTATACTCAGGGTAGTTAATGACTTTTATCTTGCAGATCGAGATAAAAATACAACTCCATTGCTTATTCTCA TCAGTGATGAGGTGCAACGATATGGGGCACTGAAATTACATCATCAGAGTGATCTTAGTACCGTAAAAATGCTACTTGAA CGATATGGGGTCAATATTGACCAAATAAAACTTGCTGAACATATACACCAAGAATATTTTAATGATCATAATTTAATGAA AAAAACAATCAGCTTGGTTACCCTATTCTCAGTCATATTACTACTCATAAGCACCATGATCATCGGAATGGCCGAATCAA AAAGGATCAGTAAAATATTAAAAATAATGGAGTCAGTAGGTGGCTCTCTATATACACATATCATTTTCTTTATACAGCAA AATGTAACCCCCGTACTGGTTGCTGTAGCAATAGCATTTCCAATTGGTTTTATCCTATTACAAAAATGGCTGAGTAAATA TAACTTCATTAATAATCTCTCATACCTCTATGCCTTTGGATCACTTTTGCTGTTTATGGTGAGTCTCGTTAGTGTAATGA CCTTGTCACTCATTTTATCGCATACCAAAAAGAATAAATAA
Upstream 100 bases:
>100_bases GCTTTGCAGAAGACTAAGTCCATCAAGCATTTTAGACGTTATAAATAAAACAAAAATAATAATATCACCAAATATAATAA TCCCAGTGAGATATTCTTGT
Downstream 100 bases:
>100_bases CATGGATATAAAATTAGAAAAAAAGATAAATATCAACAGTAGAGAGAAAATAGTTATAATTTTCGTGTTGCTTATTCTAT TTTTAAGCTGTTTCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFVIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQEIGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGIFPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIQQ NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK
Sequences:
>Translated_786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFVIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQEIGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGIFPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIQQ NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK >Mature_786_residues MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQFNLPNGEKVKSAQVPLPLIT ALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNFLTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVI TLGKKGKFVIKDVVNLNTSSRFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVNNIVNKNKKSSFQIKKSVGAS NYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVRELILTQEIGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNK SWHNHAYSAHPISHYIYQVTLSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN NSIGIFPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGYENPITPSKNDNTYHAIATKT FMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYLADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLE RYGVNIDQIKLAEHIHQEYFNDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIQQ NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILSHTKKNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89618; Mature: 89618
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEE FNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNF ECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCH LTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFVIKDVVNLNTSS HHHCCHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCEEEHHHHCCCCCC RFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG CCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCC APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVN CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVREL HHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTQEIGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEE LSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC NSIGIFPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGY CCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCC ENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYL CCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHH ADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYF CCCCCCCCCEEEEEECHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTKKNK HHCCCC >Mature Secondary Structure MLTSEFLNDVKLSPMATLLAIIITAIGMISLFLVLLLYLTDHSIEKFHHDYPQIYRIETQ CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEE FNLPNGEKVKSAQVPLPLITALQNEKNIKDVAYALRLFIDLQVNGKTQADVEIYAVSPNF ECCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCH LTALNPYRQKIPHLSHNEIIITPEFNRQYLHLNHPKGQVITLGKKGKFVIKDVVNLNTSS HHHCCHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCEEEHHHHCCCCCC RFNTRAVIAFSPDIIDDYHDKRHDWYDMHSYLFVTMVAGEKPTHEQLKTLVTRYAPQLPG CCCCEEEEEECCHHHHHHHHCCCCHHHHHHHHEEEEECCCCCCHHHHHHHHHHHCCCCCC APFSPEEFIQLSARNITDIHYDAELPDEMSTVISKSYLYTLYMAGFFIFLTTTMNFFNVN CCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NIVNKNKKSSFQIKKSVGASNYQLLTESFFIATLQAVCVLTLAFIFLSILMQASENVREL HHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTQEIGRLISSFSVAFFSLYIAILISHYLYLSTSVFPNKSWHNHAYSAHPISHYIYQVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEE LSIQIAIAGIIIYLWAGIMTQIDFMQSHTFGYEKENVVTFPLSDELKSLTSLNSLQDELN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHC NSIGIFPIALSSWRPFDMSRTTTSVFHQNQQEQDKLVSVNILNVNKNFTDTWGIKTLAGY CCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCEEEEEEEECCCCCCCCCCCCEECCC ENPITPSKNDNTYHAIATKTFMSAMGKSSSDEVLNTLFYINDNDAEYTVRILRVVNDFYL CCCCCCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHEEEEEECCCHHHHHHHHHHHHHHHH ADRDKNTTPLLILISDEVQRYGALKLHHQSDLSTVKMLLERYGVNIDQIKLAEHIHQEYF CCCCCCCCCEEEEEECHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH NDHNLMKKTISLVTLFSVILLLISTMIIGMAESKRISKILKIMESVGGSLYTHIIFFIQQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHC NVTPVLVAVAIAFPIGFILLQKWLSKYNFINNLSYLYAFGSLLLFMVSLVSVMTLSLILS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTKKNK HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA