Definition Yersinia pseudotuberculosis IP 31758, complete genome.
Accession NC_009708
Length 4,723,306

Click here to switch to the map view.

The map label for this gene is 153947475

Identifier: 153947475

GI number: 153947475

Start: 4603688

End: 4605151

Strand: Reverse

Name: 153947475

Synonym: YpsIP31758_4082

Alternate gene names: NA

Gene position: 4605151-4603688 (Counterclockwise)

Preceding gene: 153948612

Following gene: 153949028

Centisome position: 97.5

GC content: 47.88

Gene sequence:

>1464_bases
ATGCCTGCCATAGCGATTAAGCGATGGATTAAACGGATTGTACTGGTATTGGTAGTAATAAGTATTACCATACTGGCAAT
ACGTATCTACGATACACAACGTGGTCCAAAGCTTGAACTTTGGCACACTTTCGTTCCTCATGAAATGCGCGCAGCAGAGA
TAGATAAAGCCAGTTGGGCGGATTACATAAAAACTGAAAATAATATTTTCGATGAAGTCCGAATTAATGTTACGGAGAAA
CTGGAACCAAGTACTCAGGTTCCTCTGAATCGTTATTATTCTGGTAGCGCAATTTATCCCCCTCATTTTAAAAATGATTG
GAATCGCTCTTATATTCTCCAACCTGAAGGTGAGCCAAAAGGTGCGGTTGTATTACTGCATGGTTTGACCGATACCCCTT
ATAGCTTGCGTCACATTGCTGAAAATTATCGTCAGCGTGGTTATGTTGCGATTGGTATTCGCTTGCCAGCGCATGGTTCG
GTACCCGCCGCGTTAACCGATGTTGAATGGCAGGATTGGTTGGCAGCAACCCGGCTGGCAGTACGTGAAGCCAAAGCACT
TAGCGGCCCAGATTTGCCATTACATGTCGTTGGTTTCTCCAATGGTGGCGCGCTGGCAATGAAGTACACGCTGGACTCCA
TGGATGATCCTAAACTGGCAAAACCTGCTCGGGTTATCTTAATATCCCCGATGATTGGTGTGACCAGTTTTGCTCGCTTT
GCCGGTATTGCCGGTTGGCCCGCTATCTTCCCAGCGTTTGCCAAAGCCGCTTGGTTGGGGATCGTTCCAGAGTTTAACCC
TTTCAAATATAATTCGTTCCCGGTAAATGCGGCGCGTCAGTCTTATTTGTTGACCTCTGTGCTTCAACAGCATATTGCCC
GTGATGCCAGAAACAATAAAATGGACGAATTGCCACCAATCCTGACGTTCCAGTCACTGATGGATTCAACGGTAAGTACT
CGGGCAGTGGTCACCGCGCTTTACAACCACCTGCCGAATAATGGCAGCGAAGTCGTATTGTTCGATTTGAACCGCGCTGC
TAGTTTTGGCCCATTGTTGAGAACTTCATCTTATACGGCCTTGGCGCGCTTATTACCGCCGGGACCGCGTAATTACAGCA
CAACAGTGATTACCAATGTTTCGCCGCAAAGTAATGAGACTCTGGCATTAACCACGCGGGCTGGTGAAACGAACGAAACA
TCTGTGCCGACAGGGTTGGTTTATCCACCGGATATCTTCTCGTTATCTCACGTGGCGTTACCCTTCCCGATGAGCGACTC
GCTGTATGGCCGTTACCCCGATCCGCGTGATCAATACGGTATTAGTCTGGGGACTTTTGCAGCTCGTGGTGAGCGGGCTG
TGTTAGTGGTTGGGCTAGATTCGCTGATGCGTATCTCATCGAACCCGTTCTATCCATATATGTTGCAACGGATAGATGAC
AAGATAGATGCGCCGGTTCAATAA

Upstream 100 bases:

>100_bases
TATACCAAGATAATCATTTCCGTTTAAAGTACTGACGTGACCAGACGGTGATAAACTGCCCTCAATTGTGAGAAATTATA
GACCTACGGAGTAACGGCCC

Downstream 100 bases:

>100_bases
TTTGCCTGCAAAAAACCAGGCTGCTGGCAACGTGCTCGCGACGGAGAGAACCGGCAGCAAGTAAAGATGCCCGCTTCCCT
GTATAAAAATAGCTTCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MPAIAIKRWIKRIVLVLVVISITILAIRIYDTQRGPKLELWHTFVPHEMRAAEIDKASWADYIKTENNIFDEVRINVTEK
LEPSTQVPLNRYYSGSAIYPPHFKNDWNRSYILQPEGEPKGAVVLLHGLTDTPYSLRHIAENYRQRGYVAIGIRLPAHGS
VPAALTDVEWQDWLAATRLAVREAKALSGPDLPLHVVGFSNGGALAMKYTLDSMDDPKLAKPARVILISPMIGVTSFARF
AGIAGWPAIFPAFAKAAWLGIVPEFNPFKYNSFPVNAARQSYLLTSVLQQHIARDARNNKMDELPPILTFQSLMDSTVST
RAVVTALYNHLPNNGSEVVLFDLNRAASFGPLLRTSSYTALARLLPPGPRNYSTTVITNVSPQSNETLALTTRAGETNET
SVPTGLVYPPDIFSLSHVALPFPMSDSLYGRYPDPRDQYGISLGTFAARGERAVLVVGLDSLMRISSNPFYPYMLQRIDD
KIDAPVQ

Sequences:

>Translated_487_residues
MPAIAIKRWIKRIVLVLVVISITILAIRIYDTQRGPKLELWHTFVPHEMRAAEIDKASWADYIKTENNIFDEVRINVTEK
LEPSTQVPLNRYYSGSAIYPPHFKNDWNRSYILQPEGEPKGAVVLLHGLTDTPYSLRHIAENYRQRGYVAIGIRLPAHGS
VPAALTDVEWQDWLAATRLAVREAKALSGPDLPLHVVGFSNGGALAMKYTLDSMDDPKLAKPARVILISPMIGVTSFARF
AGIAGWPAIFPAFAKAAWLGIVPEFNPFKYNSFPVNAARQSYLLTSVLQQHIARDARNNKMDELPPILTFQSLMDSTVST
RAVVTALYNHLPNNGSEVVLFDLNRAASFGPLLRTSSYTALARLLPPGPRNYSTTVITNVSPQSNETLALTTRAGETNET
SVPTGLVYPPDIFSLSHVALPFPMSDSLYGRYPDPRDQYGISLGTFAARGERAVLVVGLDSLMRISSNPFYPYMLQRIDD
KIDAPVQ
>Mature_486_residues
PAIAIKRWIKRIVLVLVVISITILAIRIYDTQRGPKLELWHTFVPHEMRAAEIDKASWADYIKTENNIFDEVRINVTEKL
EPSTQVPLNRYYSGSAIYPPHFKNDWNRSYILQPEGEPKGAVVLLHGLTDTPYSLRHIAENYRQRGYVAIGIRLPAHGSV
PAALTDVEWQDWLAATRLAVREAKALSGPDLPLHVVGFSNGGALAMKYTLDSMDDPKLAKPARVILISPMIGVTSFARFA
GIAGWPAIFPAFAKAAWLGIVPEFNPFKYNSFPVNAARQSYLLTSVLQQHIARDARNNKMDELPPILTFQSLMDSTVSTR
AVVTALYNHLPNNGSEVVLFDLNRAASFGPLLRTSSYTALARLLPPGPRNYSTTVITNVSPQSNETLALTTRAGETNETS
VPTGLVYPPDIFSLSHVALPFPMSDSLYGRYPDPRDQYGISLGTFAARGERAVLVVGLDSLMRISSNPFYPYMLQRIDDK
IDAPVQ

Specific function: Unknown

COG id: COG2267

COG function: function code I; Lysophospholipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54060; Mature: 53928

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAIAIKRWIKRIVLVLVVISITILAIRIYDTQRGPKLELWHTFVPHEMRAAEIDKASWA
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCHHHHHHCCHHHHH
DYIKTENNIFDEVRINVTEKLEPSTQVPLNRYYSGSAIYPPHFKNDWNRSYILQPEGEPK
HHHHCCCCCEEHEEEEEHHCCCCCCCCCHHHCCCCCEECCCCCCCCCCCEEEECCCCCCC
GAVVLLHGLTDTPYSLRHIAENYRQRGYVAIGIRLPAHGSVPAALTDVEWQDWLAATRLA
CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEECCCHHHHHHHHHHH
VREAKALSGPDLPLHVVGFSNGGALAMKYTLDSMDDPKLAKPARVILISPMIGVTSFARF
HHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHH
AGIAGWPAIFPAFAKAAWLGIVPEFNPFKYNSFPVNAARQSYLLTSVLQQHIARDARNNK
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
MDELPPILTFQSLMDSTVSTRAVVTALYNHLPNNGSEVVLFDLNRAASFGPLLRTSSYTA
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCCHHH
LARLLPPGPRNYSTTVITNVSPQSNETLALTTRAGETNETSVPTGLVYPPDIFSLSHVAL
HHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
PFPMSDSLYGRYPDPRDQYGISLGTFAARGERAVLVVGLDSLMRISSNPFYPYMLQRIDD
CCCCCCCCCCCCCCCHHHCCCEEEHHHCCCCCEEEEEECHHHHHHCCCCCHHHHHHHHHH
KIDAPVQ
CCCCCCC
>Mature Secondary Structure 
PAIAIKRWIKRIVLVLVVISITILAIRIYDTQRGPKLELWHTFVPHEMRAAEIDKASWA
CHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEEEECCCCHHHHHHCCHHHHH
DYIKTENNIFDEVRINVTEKLEPSTQVPLNRYYSGSAIYPPHFKNDWNRSYILQPEGEPK
HHHHCCCCCEEHEEEEEHHCCCCCCCCCHHHCCCCCEECCCCCCCCCCCEEEECCCCCCC
GAVVLLHGLTDTPYSLRHIAENYRQRGYVAIGIRLPAHGSVPAALTDVEWQDWLAATRLA
CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEECCCHHHHHHHHHHH
VREAKALSGPDLPLHVVGFSNGGALAMKYTLDSMDDPKLAKPARVILISPMIGVTSFARF
HHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHH
AGIAGWPAIFPAFAKAAWLGIVPEFNPFKYNSFPVNAARQSYLLTSVLQQHIARDARNNK
HCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
MDELPPILTFQSLMDSTVSTRAVVTALYNHLPNNGSEVVLFDLNRAASFGPLLRTSSYTA
CHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHCCCHHH
LARLLPPGPRNYSTTVITNVSPQSNETLALTTRAGETNETSVPTGLVYPPDIFSLSHVAL
HHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEE
PFPMSDSLYGRYPDPRDQYGISLGTFAARGERAVLVVGLDSLMRISSNPFYPYMLQRIDD
CCCCCCCCCCCCCCCHHHCCCEEEHHHCCCCCEEEEEECHHHHHHCCCCCHHHHHHHHHH
KIDAPVQ
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA